Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30218
(430 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 5e-08
SB_51757| Best HMM Match : Hormone_recep (HMM E-Value=6.4e-37) 37 0.006
SB_28816| Best HMM Match : PAS (HMM E-Value=0.0047) 32 0.18
SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27) 32 0.18
SB_57031| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.41
SB_14472| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.41
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.41
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 30 0.71
SB_4250| Best HMM Match : zf-C4 (HMM E-Value=2.3e-39) 30 0.71
SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0) 30 0.94
SB_1748| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_20303| Best HMM Match : Trans_reg_C (HMM E-Value=0.38) 29 1.2
SB_20062| Best HMM Match : Tsg101 (HMM E-Value=0.41) 29 1.2
SB_5403| Best HMM Match : TSP_1 (HMM E-Value=0) 29 1.2
SB_50139| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_55909| Best HMM Match : Sushi (HMM E-Value=2.3e-31) 29 1.6
SB_54415| Best HMM Match : TSP_1 (HMM E-Value=6.8e-21) 29 1.6
SB_32130| Best HMM Match : TSP_1 (HMM E-Value=0) 29 1.6
SB_26424| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_14947| Best HMM Match : TSP_1 (HMM E-Value=6.8e-21) 29 1.6
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_33965| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_57479| Best HMM Match : PKD_channel (HMM E-Value=0) 29 2.2
SB_33017| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_8759| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_52239| Best HMM Match : Adaptin_N (HMM E-Value=9.9e-36) 28 3.8
SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_30173| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_28360| Best HMM Match : Phosphodiest (HMM E-Value=0) 28 3.8
SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_54463| Best HMM Match : TolA (HMM E-Value=0.39) 27 5.0
SB_33012| Best HMM Match : DUF1388 (HMM E-Value=2.6e-18) 27 5.0
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 27 5.0
SB_52116| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_37643| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_51179| Best HMM Match : VWA (HMM E-Value=3.2e-18) 27 6.6
SB_29649| Best HMM Match : Sushi (HMM E-Value=4.1e-18) 27 6.6
SB_14709| Best HMM Match : Cornifin (HMM E-Value=0.0088) 27 6.6
SB_702| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_44568| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_42395| Best HMM Match : Vicilin_N (HMM E-Value=3) 27 8.7
SB_26395| Best HMM Match : TSP_1 (HMM E-Value=3.5e-09) 27 8.7
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_5628| Best HMM Match : Complex1_LYR (HMM E-Value=3e-13) 27 8.7
SB_3851| Best HMM Match : TSP_1 (HMM E-Value=3.7e-24) 27 8.7
SB_2401| Best HMM Match : TSP_1 (HMM E-Value=0) 27 8.7
SB_2184| Best HMM Match : AMP-binding (HMM E-Value=8.5e-06) 27 8.7
SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_38612| Best HMM Match : TSP_1 (HMM E-Value=3.3e-11) 27 8.7
SB_30188| Best HMM Match : fn1 (HMM E-Value=0.48) 27 8.7
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 54.0 bits (124), Expect = 5e-08
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Frame = +1
Query: 1 QSRWDEVWQWAMQRGGKLDAHMQSXXXXXXXXXXXXXXXXXXXNNLLSMETEPLP-ESIE 177
+ RWDEVW+W+ QR +L+ ++ L E EP+P + E
Sbjct: 5814 KKRWDEVWKWSSQRLMRLEEELRKLAEEDELMGELLRWIQTKEEALAEKEKEPIPDDDYE 5873
Query: 178 LLEGLIEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQGRES-TPRKVSXKSATKGTPGRI 354
+ L+E+HK E K+Q DR+ K+ K + G + TP + S G RI
Sbjct: 5874 EVHRLLEEHKVFQEEMAKKQPSYDRLTKS--AKRRTNGSTTRTPEVKATPSRRGGAVSRI 5931
>SB_51757| Best HMM Match : Hormone_recep (HMM E-Value=6.4e-37)
Length = 405
Score = 37.1 bits (82), Expect = 0.006
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 2 RAAGTRYGNGPCSGAASW-TRTCRASETWTSCSRSCCSGSPDSRTTCYQWRLSRCL 166
++ G YG C G + + RT R E W +++ CS SR C R+ +C+
Sbjct: 30 QSTGKHYGVFACDGCSGFFKRTSRRLEPWVCKAQNACSVKTTSRNECKACRMKKCV 85
>SB_28816| Best HMM Match : PAS (HMM E-Value=0.0047)
Length = 405
Score = 32.3 bits (70), Expect = 0.18
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +1
Query: 157 PLPESIELLEGLIEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQGRESTPR 309
P P++++ ++ K+L+E Q++Q + + +A+Q S G STP+
Sbjct: 202 PSPQTLQTMQNSKPGVKQLLEVLQRQQGKGGKKGRAFQYPSSEDGEASTPK 252
>SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27)
Length = 1019
Score = 32.3 bits (70), Expect = 0.18
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = +1
Query: 229 KRQNEVDRVCKAYQVKSQVQGRESTPRKVSXKSATKGTPGRISPGRETPDRNLPHYGPRF 408
KR+ E++RV Y S+ RES + +T+G + R D PH R
Sbjct: 668 KREQEMERVRAEYSRDSKEPARESRNLSNESRKSTQGESSNVHEARNVQDSRNPHSESRV 727
Query: 409 PPKGSKS 429
S++
Sbjct: 728 SDAESRN 734
>SB_57031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1495
Score = 31.1 bits (67), Expect = 0.41
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 14/65 (21%)
Frame = +2
Query: 20 YGNGPCSGAASWTRTCRASET--------------WTSCSRSCCSGSPDSRTTCYQWRLS 157
YG CSG A+ T+ C WT+C+R+C +G+ QWR+
Sbjct: 327 YGGLNCSGPANQTQECETQPCPVGPVNGNFTEWTKWTTCTRTCGTGT--------QWRMR 378
Query: 158 RCLNP 172
C NP
Sbjct: 379 TCTNP 383
>SB_14472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 31.1 bits (67), Expect = 0.41
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 2 RAAGTRYGNGPCSGAASW-TRTCRASETWTSCSRSCCSGSPDSRTTCYQWRLSRCL 166
+++G YG C G S+ R+ R + T+T + C R C RL +CL
Sbjct: 249 KSSGKHYGVFTCEGCKSFFKRSVRRNLTYTCRASRDCPIDQHHRNQCQYCRLKKCL 304
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 31.1 bits (67), Expect = 0.41
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 9/50 (18%)
Frame = +2
Query: 17 RYGNGPCSGA-----ASWTRTCRAS----ETWTSCSRSCCSGSPDSRTTC 139
R+G PC GA + R C ++ WTSCS SC SG +C
Sbjct: 876 RFGGKPCKGANMSAMVCYQRACPSTWSSWSNWTSCSVSCGSGVQVRTRSC 925
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 29 GPCSGAASWTRTCRASETWTSCSRSCCSGSPDSRTTCYQ 145
G C + W+ SE W+SCSRSC +G+ TC Q
Sbjct: 730 GHCPISGEWSTW---SE-WSSCSRSCNNGTMFRNRTCSQ 764
Score = 28.7 bits (61), Expect = 2.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 83 WTSCSRSCCSGSPDSRTTC 139
WTSCS SC G SR C
Sbjct: 331 WTSCSSSCGGGKRRSRRAC 349
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 9/41 (21%)
Frame = +2
Query: 20 YGNGPCSGAASWTRTCRASE---------TWTSCSRSCCSG 115
YG PC G C ++ WT CS SC SG
Sbjct: 767 YGGAPCPGRNIQVSPCNPTDCPSYWSNWSNWTDCSVSCSSG 807
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 30.7 bits (66), Expect = 0.54
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 139 LSMETEPLPESIELLEGLIEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQGREST 303
L E E L +E E L+ + E M++ K NE+ + + YQVK + +E T
Sbjct: 1098 LRNEKENLRALLESKEQLVMSYSEEMKNLTKDNNELSVLVEEYQVKLHEKDKELT 1152
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 30.3 bits (65), Expect = 0.71
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 130 NNLLSMETEPLPESIELLEGLIEDHKELMEHTQKRQNEVDRVCK 261
N L + E L E +E + L + HK+L Q+E+D+V +
Sbjct: 174 NKELRSDVEELQEQVEDMAALAKKHKQLKTRNDDLQDELDQVTR 217
>SB_4250| Best HMM Match : zf-C4 (HMM E-Value=2.3e-39)
Length = 79
Score = 30.3 bits (65), Expect = 0.71
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 2 RAAGTRYGNGPCSGAAS-WTRTCRASETWTSCSRSCCSGSPDSRTTCYQWRLSRC 163
RA G YG C G + R+ R + ++ + C + D R C RL +C
Sbjct: 16 RATGKHYGASSCDGCKGFFRRSVRKNHVYSCRFQRNCVINKDKRNQCRFCRLRKC 70
>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2681
Score = 29.9 bits (64), Expect = 0.94
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +2
Query: 35 CSGAASWTRTCRASETWTSCSRSCCSGSPDSRTTCYQWRLSRC 163
C +W+R WT C+RSC G C+Q ++ C
Sbjct: 429 CPATGNWSRW----SDWTECTRSCGGGVQFRSRDCFQDDVTSC 467
>SB_1748| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 29.5 bits (63), Expect = 1.2
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +3
Query: 168 IHRASRGLDRRPQRTDGAYSEETERSRPRLQSVPGEESGPRKRIYAKEGIXEERHKRNSW 347
+H+ S DR+ ++ S + E ++PR Q+ G+ K A G + K S
Sbjct: 332 VHKQS---DRQRPKSAMETSCQKENNKPRPQTAKGKSQTRPKTAKATTGSEQPSPKMQSL 388
Query: 348 SYQPWTGDARSE 383
SY W R +
Sbjct: 389 SYDEWLKQKREQ 400
>SB_20303| Best HMM Match : Trans_reg_C (HMM E-Value=0.38)
Length = 1354
Score = 29.5 bits (63), Expect = 1.2
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +1
Query: 142 SMETEPLPESIELLEGLIEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQGRESTPRKVSX 321
S ETE P ++LLEGL D+ + EH+ +D V K + ++ R+ T + +
Sbjct: 639 STETESRPSLLKLLEGL-HDNTHVQEHSAM----IDWVLKKFH--EELDARKETGQAQTD 691
Query: 322 KSATKGT 342
+ A K T
Sbjct: 692 RPARKDT 698
>SB_20062| Best HMM Match : Tsg101 (HMM E-Value=0.41)
Length = 686
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +1
Query: 277 SQVQGRESTPRKVSXKSATKGTPGRISPGRETPDRN 384
S Q R +T R S SAT+ P R +PG TPDR+
Sbjct: 402 SAEQERPTTSRP-SHTSATEYYPDRQAPGHRTPDRH 436
>SB_5403| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 684
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +2
Query: 23 GNGPCSGAASWTRTCRASETWTSCSRSCCSGSPDSRTTC 139
G PC W+ +W+SC++SC G+ TC
Sbjct: 405 GKAPCPVNGGWSDY----SSWSSCTKSCSGGTRTRTRTC 439
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 23 GNGPCSGAASWTRTCRASETWTSCSRSCCSGSPDSRTTC 139
G PC W+ SE WT C+++C G + TC
Sbjct: 462 GKAPCPVNGGWSEF---SE-WTKCTKTCGGGKQERTRTC 496
>SB_50139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2211
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 23 GNGPCSGAASWTRTCRASETWTSCSRSCCSGSPDSRTTC 139
G PC W+ SE WT C+++C G + TC
Sbjct: 431 GKAPCPVNGGWSEF---SE-WTKCTKTCGGGKQERTRTC 465
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +2
Query: 23 GNGPCSGAASWTRTCRASETWTSCSRSCCSGSPDSRTTC 139
G PC W+ +W+SC++SC G+ TC
Sbjct: 374 GKAPCPVNGGWSDY----SSWSSCTKSCGGGTRTRTRTC 408
>SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 756
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 32 PCSGAASWTRTCRASETWTSCSRSCCSGSPDSRTTC 139
PC W+ A +W+SC++SC G+ TC
Sbjct: 84 PCRVNGGWS----AYSSWSSCTKSCGGGTQTRTRTC 115
>SB_55909| Best HMM Match : Sushi (HMM E-Value=2.3e-31)
Length = 526
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 59 RTCRASETWTSCSRSCCSGSPDSRTTC 139
RTC+ TWT SCCS S + C
Sbjct: 440 RTCQLDGTWTGQPTSCCSQSNLAAKLC 466
>SB_54415| Best HMM Match : TSP_1 (HMM E-Value=6.8e-21)
Length = 612
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 23 GNGPCSGAASWTRTCRASETWTSCSRSCCSGSPDSRTTC 139
G PC W+ SE WT C+++C G + TC
Sbjct: 93 GKAPCPVNGGWSEF---SE-WTKCTKTCGGGKQERTRTC 127
>SB_32130| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 446
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 23 GNGPCSGAASWTRTCRASETWTSCSRSCCSGSPDSRTTC 139
G PC W+ SE WT C+++C G + TC
Sbjct: 346 GKAPCPVNGGWSEF---SE-WTKCTKTCGGGKQERTRTC 380
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +2
Query: 23 GNGPCSGAASWTRTCRASETWTSCSRSCCSGSPDSRTTC 139
G PC W+ +W+SC++SC G+ TC
Sbjct: 289 GKAPCPVNGGWSDY----SSWSSCTKSCGGGTRTRTRTC 323
>SB_26424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 213 DGAYSEETERSRPRLQSVPGEESGPRKRIYAKEGIXEERHKRNSW 347
D S++ +RS Q +PG E+ P+ +GI +KRN W
Sbjct: 323 DPKRSQDPKRSPKAPQLIPGPETIPKSPRNEPQGIAVMDNKRNVW 367
>SB_14947| Best HMM Match : TSP_1 (HMM E-Value=6.8e-21)
Length = 666
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 23 GNGPCSGAASWTRTCRASETWTSCSRSCCSGSPDSRTTC 139
G PC W+ SE WT C+++C G + TC
Sbjct: 78 GKAPCPVNGGWSEF---SE-WTKCTKTCGGGKQERTRTC 112
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +3
Query: 192 DRRPQRTDGAYSEETERSRPRLQSVPGEESGPRKRIYAKEGIXEERHKRN 341
D P+R G+ S +R R ++ ++ PR+R + G H+R+
Sbjct: 802 DSPPERKKGSVSPRDQRRRSPMRRRRSRDASPRRRRRSASGSDSSPHRRS 851
Score = 27.1 bits (57), Expect = 6.6
Identities = 20/75 (26%), Positives = 31/75 (41%)
Frame = +3
Query: 180 SRGLDRRPQRTDGAYSEETERSRPRLQSVPGEESGPRKRIYAKEGIXEERHKRNSWSYQP 359
SR + R P+R D + ++ R P + K K + R +R S S
Sbjct: 1006 SRSVSRSPER-DRKGRDSAKKERQSHSESPQRVTKSSKERPRKRPRHQSRERRPSSSPPR 1064
Query: 360 WTGDARSEPAPLRTP 404
+ R+ P+P RTP
Sbjct: 1065 RSRPQRTSPSPRRTP 1079
>SB_33965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 528
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 171 HRASRGLDRRPQRTDGAYSEETERSRPRLQSVPGEESG 284
HR +RP+RT G + R + R ++ GEE G
Sbjct: 467 HREQEKHVQRPERTVGCMCRRSRRPKKRTRAAAGEELG 504
>SB_57479| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 939
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/53 (22%), Positives = 22/53 (41%)
Frame = +3
Query: 207 RTDGAYSEETERSRPRLQSVPGEESGPRKRIYAKEGIXEERHKRNSWSYQPWT 365
+ D + E E +++ PG P + KE +++ +W Y WT
Sbjct: 74 KVDNSTQERAENREDKVKIDPGANDKPSENSQGKEEKKKKKGLHPNWRYLAWT 126
>SB_33017| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 136 LLSMETEPLPESIELLE-GLIEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQGRESTPRK 312
+ ++ E P I E I+D+K ++ Q R+ +DRV Q Q + + S +K
Sbjct: 126 IFPIQEEMAPSDINASEYKQIQDNKSVLRSLQTRKLSIDRVSFNNQANLQKRRKSSLEKK 185
Query: 313 VSXKS 327
+ K+
Sbjct: 186 AADKN 190
>SB_8759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 28.3 bits (60), Expect = 2.9
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = +3
Query: 201 PQRTDGAYSEETERSRPRLQSVPGEESGPRKRIYAKEGIXEERHKRNSWSYQPWTGDARS 380
PQR + + + + +L+S P S R +G + + S P T DA
Sbjct: 153 PQRREHSPNRSPIMAPHQLKSPPPYNSFHRSSWKGSQGSTDSLNSNPRRSESPLTQDATL 212
Query: 381 EPAPLRTPIP 410
+ +PLR P P
Sbjct: 213 QGSPLRHPSP 222
>SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1670
Score = 28.3 bits (60), Expect = 2.9
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 130 NNLLSMETEPLPESIELLEGLIEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQGRESTPR 309
NN + +P+S E E ED+ + + + Q E+ R +A + KS++ + S+
Sbjct: 422 NNPSPNAVQVIPDSPERKENSNEDNSDELVRLPRWQVELMRKAQAEEDKSKMTKQSSSLT 481
Query: 310 KVSXKSATKG 339
S SA+ G
Sbjct: 482 STSAPSASMG 491
>SB_52239| Best HMM Match : Adaptin_N (HMM E-Value=9.9e-36)
Length = 723
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 175 ELLEGLIEDHKELMEHTQK--RQNEVDRVCKAYQVKSQVQGR 294
ELLE L+ + +EH R+N V + Y+ +SQ QGR
Sbjct: 322 ELLEPLMPAIRTCLEHRHSYVRRNAVMAIYTIYRTRSQQQGR 363
>SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 27.9 bits (59), Expect = 3.8
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +1
Query: 226 QKRQNEVDRVCKAYQVKSQVQGRESTPRKVSXKSATKGTPGRISPGRETPDRNLPHYGPR 405
++ Q +D+ A+Q K Q + P + PG + PGR P + LP
Sbjct: 186 EQAQTLIDQTTAAFQSKPNSQMPPNAPPGLMPPPGMLPPPGGMPPGR-MPPQGLP----- 239
Query: 406 FPPKG 420
FPP G
Sbjct: 240 FPPPG 244
>SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +3
Query: 174 RASRGLDRRPQRTDGAYSEETERSRPRLQSVPGEESGPRKRIYAKEGIXEERHK 335
R+S G P RT S T RSR + SVP P + + + EE+ +
Sbjct: 194 RSSLGSIAPPSRTSTPRSRSTPRSRQEVASVPHPHPPPPRVVPLPVVVQEEQEQ 247
>SB_30173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 178 LLEGLIEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQGRE 297
L+ GLI+++ HT NE+ + CK YQ+ + RE
Sbjct: 298 LVHGLIDENVHFY-HTSLLINELVKACKPYQLLHEGDNRE 336
>SB_28360| Best HMM Match : Phosphodiest (HMM E-Value=0)
Length = 483
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 222 YSEETERSRPRLQ-SVPGEESG-PRKRIYAKEGIXEERHKRNSWSYQP 359
Y E +P L SV E G P ++Y ++ + EE H RN+ Y P
Sbjct: 285 YHEPGMWVKPELVGSVYKELQGIPHAKVYLRKDVPEEYHSRNNRRYPP 332
>SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 26 NGPCSGAASWTRTCRASETWTSCSRSCCSGSPDSRTTCY 142
N PC S C++S T +RS C + +R++C+
Sbjct: 109 NTPCKEQLSHNTPCKSSCQTTHHARSSCHTTHSARSSCH 147
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 26 NGPCSGAASWTRTCRASETWTSCSRSCCSGSPDSRTTCY 142
N PC + T R+S T +RS C +R++C+
Sbjct: 119 NTPCKSSCQTTHHARSSCHTTHSARSSCHTKHSTRSSCH 157
>SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -2
Query: 291 SLDLTLHLVRFADAVYFVLSLLSMLHQFFVVFYQ 190
SL++T +F D V+F+ LL +L FFV YQ
Sbjct: 34 SLEVTDIDTQFHDGVFFIF-LLGLLEGFFVPLYQ 66
>SB_54463| Best HMM Match : TolA (HMM E-Value=0.39)
Length = 461
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/56 (21%), Positives = 25/56 (44%)
Frame = +3
Query: 168 IHRASRGLDRRPQRTDGAYSEETERSRPRLQSVPGEESGPRKRIYAKEGIXEERHK 335
+H+ ++ ++ +R + RSR + P +E GP + +E E H+
Sbjct: 87 LHKCAQAQKKKAKRKNQRPKTSKRRSRKDINECPTKEDGPELSVIKRERADEIGHQ 142
>SB_33012| Best HMM Match : DUF1388 (HMM E-Value=2.6e-18)
Length = 212
Score = 27.5 bits (58), Expect = 5.0
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 268 QVKSQVQGRESTPRKVSXKSATKGTPGR-ISPGRE-TPDRN 384
Q + + QGR+ TP + K TPGR +PGR+ TP R+
Sbjct: 143 QGRDKTQGRDKTPGRDKTPGRDK-TPGRDKTPGRDKTPGRD 182
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 27.5 bits (58), Expect = 5.0
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +1
Query: 193 IEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQ--GRESTPRKVSXKSATKGTPGRIS--P 360
++D +E ++ + +N D A + S++Q E +PR VS AT G+P S P
Sbjct: 731 VDDPEESIDEDDEEENGEDTK-HAEEDGSRIQEPSEEPSPRPVSETEATNGSPEDYSDEP 789
Query: 361 GRETPDR 381
E D+
Sbjct: 790 DMENTDK 796
>SB_52116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 171 HRASRGLDRRPQRTDGAYSEETERSRPRLQSVPGEESGPRKRIYAK 308
HR +R L +++ G Y E++ R R V E P R+ AK
Sbjct: 487 HRVNRLLMVGEKKSGGKYGEKSTHRRVRRDDVTLERCAPAGRVTAK 532
>SB_37643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 20 YGNGPCSGAASWTRTCRASETWTSCSRSC 106
YGN PC+ W T R+ + RSC
Sbjct: 11 YGNSPCNLVRLWKLTLRSCTVMETPLRSC 39
>SB_51179| Best HMM Match : VWA (HMM E-Value=3.2e-18)
Length = 465
Score = 27.1 bits (57), Expect = 6.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 83 WTSCSRSCCSGSPDSRTTC 139
WT CS+SC +G TC
Sbjct: 185 WTKCSKSCGTGFKSRERTC 203
>SB_29649| Best HMM Match : Sushi (HMM E-Value=4.1e-18)
Length = 214
Score = 27.1 bits (57), Expect = 6.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 50 SWTRTCRASETWTSCSRSC 106
S TRTC+A TW+ + SC
Sbjct: 130 SKTRTCQADTTWSGINPSC 148
>SB_14709| Best HMM Match : Cornifin (HMM E-Value=0.0088)
Length = 301
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +2
Query: 56 TRTCRASETWTSCS---RSCCSGSPDSRTTCYQWRLSRC 163
TRT ++TWT+C R+ C D+RT C+ + C
Sbjct: 56 TRTACHTDTWTACHTDIRTAC--HTDTRTACHTDTRTAC 92
>SB_702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 27.1 bits (57), Expect = 6.6
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +1
Query: 205 KELMEHTQKRQNEVDRVCKAYQVKSQVQGRESTPRKVSXKSATKGTPG-RISPGRETPDR 381
+ L Q+ + C + Q G+ STP S K T+G G +S R TP R
Sbjct: 825 QRLSTPNQESAKAITAKCDSPQHAVDEDGKPSTPPSRS-KKRTRGISGDSVSDNRHTPRR 883
Query: 382 NL 387
+L
Sbjct: 884 SL 885
>SB_44568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 120 GEPLQQLLEHEVQVSEALHVRVQLAAPL 37
G P Q + +H V+VS + RV + APL
Sbjct: 362 GPPGQHVADHAVEVSSRVLARVPIHAPL 389
>SB_42395| Best HMM Match : Vicilin_N (HMM E-Value=3)
Length = 115
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 175 ELLEGLIEDHKELMEHTQKRQNEV 246
E EG +E H+ + +H Q+R N++
Sbjct: 16 EKTEGTLESHRRICKHHQRRANKL 39
>SB_26395| Best HMM Match : TSP_1 (HMM E-Value=3.5e-09)
Length = 250
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Frame = +2
Query: 83 WTSCSRSCCSGSPDSRTTCYQ----WRLSRCLNP 172
W+ C+R C GS TC W +C+ P
Sbjct: 179 WSKCTRVCGKGSSTRNRTCTNPEPAWGGKKCVGP 212
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = -2
Query: 135 VVLESGEPLQQLLEHEVQVSEALHVRVQLAAPLHGPLPYLVPAA 4
VV +SGE L + + + S + HVRVQ L G +P L P A
Sbjct: 201 VVFDSGEVLSIDQQFQGKDSSSPHVRVQ--THLSGSIPILHPRA 242
>SB_5628| Best HMM Match : Complex1_LYR (HMM E-Value=3e-13)
Length = 487
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 325 SATKGTPGRISPGRETP-DRNLPH 393
S T+GTP + RETP D ++PH
Sbjct: 270 SITRGTPNDFTITRETPNDSSIPH 293
>SB_3851| Best HMM Match : TSP_1 (HMM E-Value=3.7e-24)
Length = 429
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 5 AAGTRYGNGPCSGAASWTRTCRASETWTSCSRSCCSGSPDSRTTCYQWRLSRC 163
++ T GPC A+W + TW+ CS +C G+ TC S C
Sbjct: 143 SSSTLCNMGPC---ATWQ-----TGTWSQCSVTCGKGTQVRTVTCSDKDTSAC 187
>SB_2401| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 818
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 23 GNGPCSGAASWTRTCRASETWTSCSRSCCSGSPDSRTTC 139
G PC W+ + W+SC++SC G TC
Sbjct: 493 GISPCPVNGGWSDFSK----WSSCTKSCGGGIMSRTRTC 527
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Frame = +2
Query: 83 WTSCSRSCCSGSPDSRTTCYQ----WRLSRCLNP 172
W+ C+R C GS TC W +C+ P
Sbjct: 771 WSKCTRVCGKGSSTRNRTCTNPEPAWGGKKCVGP 804
>SB_2184| Best HMM Match : AMP-binding (HMM E-Value=8.5e-06)
Length = 757
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 201 PQRT-DGAYSEETERSRPRLQSVPGEESGPRKRIYAKEGIXEERHKRN 341
P+R+ D S++ +RS Q +PG E+ P+ +GI +KRN
Sbjct: 709 PKRSQDPKRSQDPKRSPKVPQLIPGPETIPKSPRNEPQGIAVMENKRN 756
>SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1668
Score = 26.6 bits (56), Expect = 8.7
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +1
Query: 139 LSMETEPLPESIELLEGLIEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQGRESTPRKVS 318
LS++T P ++L ++KE ++ Q+ Q+E+D++ + S E +PR +S
Sbjct: 272 LSIDTPPDKRELKL------EYKESVKERQRLQSEIDKI---NEKLSNCSSTEESPRPIS 322
Query: 319 XKSAT 333
+ T
Sbjct: 323 ASTNT 327
>SB_38612| Best HMM Match : TSP_1 (HMM E-Value=3.3e-11)
Length = 900
Score = 26.6 bits (56), Expect = 8.7
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +2
Query: 74 SETWTSCSRSCCSGSPDSRTTCYQ 145
S W++CS++C G +C Q
Sbjct: 783 SSAWSACSQTCAGGQQTRTVSCKQ 806
>SB_30188| Best HMM Match : fn1 (HMM E-Value=0.48)
Length = 334
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 133 NLLSMETEPLPESIELLEGLIEDHKELMEHTQK 231
N+ S ++E P I + + IEDH EL E+T+K
Sbjct: 90 NVFSYDSEQ-PYPIYVSKERIEDHMELREYTKK 121
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/45 (22%), Positives = 27/45 (60%)
Frame = +1
Query: 166 ESIELLEGLIEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQGRES 300
E ++ +GL+E +++ + QK +NE++ + K + + + ++S
Sbjct: 2565 EELKSEKGLLEQKQQMQDEAQKLRNEIEVLKKLHAIALEDANQKS 2609
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.310 0.128 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,484,737
Number of Sequences: 59808
Number of extensions: 288946
Number of successful extensions: 1111
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 826502419
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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