Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30218
(430 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 25 0.27
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 25 0.36
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 1.1
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 23 1.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 2.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 3.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 3.3
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 4.4
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 4.4
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 4.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 5.8
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 5.8
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 5.8
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 5.8
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 5.8
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 7.7
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 7.7
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 25.4 bits (53), Expect = 0.27
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 195 RRPQRTDGAYSEET-ERSRPRLQSVPGEESGPRKRIYAKEGIXEERHKR 338
RR +R+DG + T E RPR + GE+ KR +A+ ER ++
Sbjct: 4 RRVKRSDGRGNGGTPEEKRPR-TAFSGEQLARLKREFAENRYLTERRRQ 51
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 25.0 bits (52), Expect = 0.36
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 274 SPGTLCRRGLLRSVSSEYAPSVLCG 200
+PG +CR G LR+ P CG
Sbjct: 68 APGCVCRLGYLRNKKKVCVPRSKCG 92
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 1.1
Identities = 13/51 (25%), Positives = 21/51 (41%)
Frame = +1
Query: 148 ETEPLPESIELLEGLIEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQGRES 300
E E + + + E L + +K +NE + CK Y + S G S
Sbjct: 172 EREEIKNILNKTNEITEHRTVLAVNIEKSENET-KTCKKYAISSNSLGSRS 221
Score = 21.0 bits (42), Expect = 5.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 180 SRGLDRRPQRTDGAYSEETERSR 248
SR DR R DG S +RSR
Sbjct: 237 SRHEDRNSYRNDGERSCSRDRSR 259
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 22.6 bits (46), Expect = 1.9
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 274 SPGTLCRRGLLRSVSSEYAPSVLC 203
+PG +CR G LR+ P C
Sbjct: 68 APGCVCRLGYLRNKKKVCVPRSKC 91
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 2.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 340 TPGRISPGRETPDRN 384
T G I+P RE PD N
Sbjct: 1555 TGGTIAPARELPDVN 1569
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 3.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 408 ESGSVVGQVPIWRLPSRADTTRSSFCGALR*YLPWRRFSSL 286
+S V QVP R+P+R +SF G + PWR ++L
Sbjct: 1299 QSSKVAAQVPTNRVPARI----TSFGGHV--VRPWRGSATL 1333
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 3.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 408 ESGSVVGQVPIWRLPSRADTTRSSFCGALR*YLPWRRFSSL 286
+S V QVP R+P+R +SF G + PWR ++L
Sbjct: 1295 QSSKVAAQVPTNRVPARI----TSFGGHV--VRPWRGSATL 1329
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 4.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 275 RVRSKEENLRQGRYXRRAPQKELLVVSALDGRRQIGTCPT 394
+VR+KEE RY A + L ++ + G R + +C T
Sbjct: 110 QVRTKEEPHAPYRYEAVAVIHKDLPINNVQGLRGLKSCHT 149
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 4.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 275 RVRSKEENLRQGRYXRRAPQKELLVVSALDGRRQIGTCPT 394
+VR+KEE RY A + L ++ + G R + +C T
Sbjct: 110 QVRTKEEPHAPYRYEAVAVIHKDLPINNVQGLRGLKSCHT 149
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 4.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 275 RVRSKEENLRQGRYXRRAPQKELLVVSALDGRRQIGTCPT 394
+VR+KEE RY A + L ++ + G R + +C T
Sbjct: 110 QVRTKEEPHAPYRYEAVAVIHKDLPINNVQGLRGLKSCHT 149
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 5.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 180 SRGLDRRPQRTDGAYSEETERSR 248
SR DR R DG S +RSR
Sbjct: 237 SRHEDRNSYRNDGERSCSRDRSR 259
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 5.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 180 SRGLDRRPQRTDGAYSEETERSR 248
SR DR R DG S +RSR
Sbjct: 237 SRHEDRNSYRNDGERSCSRDRSR 259
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 5.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 180 SRGLDRRPQRTDGAYSEETERSR 248
SR DR R DG S +RSR
Sbjct: 237 SRHEDRNSYRNDGERSCSRDRSR 259
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.0 bits (42), Expect = 5.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 180 SRGLDRRPQRTDGAYSEETERSR 248
SR DR R DG S +RSR
Sbjct: 237 SRHEDRNSYRNDGERSCSRDRSR 259
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.0 bits (42), Expect = 5.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 180 SRGLDRRPQRTDGAYSEETERSR 248
SR DR R DG S +RSR
Sbjct: 237 SRHEDRNSYRNDGERSCSRDRSR 259
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 20.6 bits (41), Expect = 7.7
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +3
Query: 249 PRLQSVPGEESGPRKRIYAKEGIXEERHKRNSWSYQP 359
P++ S GEE PR+ + + +K Y+P
Sbjct: 145 PQMYSSGGEEITPRQSHQSYHHMDSVEYKPEIMEYKP 181
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 20.6 bits (41), Expect = 7.7
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 255 LQSVPGEESGPRKRIYAKEGIXEERHKRNSWSYQPWTGDAR 377
L S P E PR + K R+KR +++P D+R
Sbjct: 135 LSSPPREPGTPRIN-FTKLKRHHPRYKRPRTTFEPRATDSR 174
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.310 0.128 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,078
Number of Sequences: 438
Number of extensions: 2149
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (20.9 bits)
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