Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30218
(430 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g47430.1 68418.m05844 expressed protein 31 0.33
At3g02170.1 68416.m00190 expressed protein 31 0.33
At2g03460.1 68415.m00304 kelch repeat-containing protein contain... 29 1.0
At5g58140.4 68418.m07274 protein kinase family protein / non pho... 29 1.8
At5g58140.3 68418.m07277 protein kinase family protein / non pho... 29 1.8
At5g58140.2 68418.m07276 protein kinase family protein / non pho... 29 1.8
At5g58140.1 68418.m07275 protein kinase family protein / non pho... 29 1.8
At5g27220.1 68418.m03247 protein transport protein-related low s... 29 1.8
At2g46680.1 68415.m05825 homeobox-leucine zipper protein 7 (HB-7... 29 1.8
At1g34300.1 68414.m04256 lectin protein kinase family protein co... 28 2.3
At1g50790.1 68414.m05712 hypothetical protein 28 3.1
At3g04960.1 68416.m00538 expressed protein low similarity to SP|... 27 5.4
At5g16630.1 68418.m01947 DNA repair protein Rad4 family low simi... 27 7.1
At4g09520.1 68417.m01565 2,3-biphosphoglycerate-independent phos... 27 7.1
At3g30841.1 68416.m03967 2,3-biphosphoglycerate-independent phos... 27 7.1
At1g15240.1 68414.m01824 phox (PX) domain-containing protein wea... 27 7.1
At3g47270.1 68416.m05135 hypothetical protein similar to At2g049... 26 9.4
At3g20090.1 68416.m02548 cytochrome P450 family protein similar ... 26 9.4
At2g04970.1 68415.m00518 hypothetical protein similar to At2g152... 26 9.4
>At5g47430.1 68418.m05844 expressed protein
Length = 879
Score = 31.1 bits (67), Expect = 0.33
Identities = 22/78 (28%), Positives = 30/78 (38%)
Frame = +3
Query: 180 SRGLDRRPQRTDGAYSEETERSRPRLQSVPGEESGPRKRIYAKEGIXEERHKRNSWSYQP 359
SR R+ +R + +R R R Q V E R R ++ + RH R
Sbjct: 687 SRDSKRKSERYPDERDRQRDRERSRHQDVDREHDRTRDR-RDEDRSRDHRHHRGETERSQ 745
Query: 360 WTGDARSEPAPLRTPIPA 413
RSEP P+PA
Sbjct: 746 HHHRKRSEPPSSEPPVPA 763
>At3g02170.1 68416.m00190 expressed protein
Length = 905
Score = 31.1 bits (67), Expect = 0.33
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 145 METEPLPESIELLEGLIEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQGRES-TPRKVSX 321
+ T PLP+++ L + + ++ + T +QN +D + K Q+ +S +P+ V
Sbjct: 431 VSTSPLPQNVTLPNVKVGNSRQTRKVTSGKQNAMDLTPRPGLYKGQLDSTKSNSPKTVRS 490
Query: 322 KSATKGTPGRISPGRETPDRNLPHYGPRFPPK 417
+ A G ++ + ++ PR PK
Sbjct: 491 RQALAADAGSMTKSGRSQQHSV---SPRTQPK 519
>At2g03460.1 68415.m00304 kelch repeat-containing protein contains
Pfam profile PF01344: Kelch motif
Length = 333
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 270 GEESGPRKRIYAKEGIXEERHKRNSWSYQPWTGDARSEP 386
G +SG +K I E E R W W GD +EP
Sbjct: 281 GPDSGYKKMIRCAEIALERRKSCEIWGIVEWFGDVLTEP 319
>At5g58140.4 68418.m07274 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 689
Score = 28.7 bits (61), Expect = 1.8
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +1
Query: 205 KELMEH-TQKRQNEVDRVCKAYQV----KSQVQGRESTPRKVSXKSATKGTPGRISPGRE 369
K L+ + ++++ +D + + Q KSQVQ S V S+T TPGR + +
Sbjct: 255 KSLIRYDARQKEKALDSITEVVQTIRHRKSQVQESVSNDTMVKPDSSTTPTPGRQTRQSD 314
Query: 370 TPDRNLPHYGPRFPPKGSK 426
++ G P GSK
Sbjct: 315 EASKSFRTPGRVSTPTGSK 333
>At5g58140.3 68418.m07277 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 915
Score = 28.7 bits (61), Expect = 1.8
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +1
Query: 205 KELMEH-TQKRQNEVDRVCKAYQV----KSQVQGRESTPRKVSXKSATKGTPGRISPGRE 369
K L+ + ++++ +D + + Q KSQVQ S V S+T TPGR + +
Sbjct: 255 KSLIRYDARQKEKALDSITEVVQTIRHRKSQVQESVSNDTMVKPDSSTTPTPGRQTRQSD 314
Query: 370 TPDRNLPHYGPRFPPKGSK 426
++ G P GSK
Sbjct: 315 EASKSFRTPGRVSTPTGSK 333
>At5g58140.2 68418.m07276 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 915
Score = 28.7 bits (61), Expect = 1.8
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +1
Query: 205 KELMEH-TQKRQNEVDRVCKAYQV----KSQVQGRESTPRKVSXKSATKGTPGRISPGRE 369
K L+ + ++++ +D + + Q KSQVQ S V S+T TPGR + +
Sbjct: 255 KSLIRYDARQKEKALDSITEVVQTIRHRKSQVQESVSNDTMVKPDSSTTPTPGRQTRQSD 314
Query: 370 TPDRNLPHYGPRFPPKGSK 426
++ G P GSK
Sbjct: 315 EASKSFRTPGRVSTPTGSK 333
>At5g58140.1 68418.m07275 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 915
Score = 28.7 bits (61), Expect = 1.8
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +1
Query: 205 KELMEH-TQKRQNEVDRVCKAYQV----KSQVQGRESTPRKVSXKSATKGTPGRISPGRE 369
K L+ + ++++ +D + + Q KSQVQ S V S+T TPGR + +
Sbjct: 255 KSLIRYDARQKEKALDSITEVVQTIRHRKSQVQESVSNDTMVKPDSSTTPTPGRQTRQSD 314
Query: 370 TPDRNLPHYGPRFPPKGSK 426
++ G P GSK
Sbjct: 315 EASKSFRTPGRVSTPTGSK 333
>At5g27220.1 68418.m03247 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1181
Score = 28.7 bits (61), Expect = 1.8
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = +1
Query: 166 ESIELLEGLIEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQGRESTPRKVSXKSATKGT 342
ESI+LL +E+H E + ++R NE+ + ++ ++ +E T +++S K +K T
Sbjct: 437 ESIKLL---LEEHSEELAIKEERHNEIAEAVR--KLSLEIVSKEKTIQQLSEKQHSKQT 490
>At2g46680.1 68415.m05825 homeobox-leucine zipper protein 7 (HB-7) /
HD-ZIP transcription factor 7 identical to
homeobox-leucine zipper protein ATHB-7 (HD-ZIP protein
ATHB-7) (SP:P46897) [Arabidopsis thaliana];
Length = 258
Score = 28.7 bits (61), Expect = 1.8
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Frame = +1
Query: 133 NLLSMETEPLPESIELL----EGLIEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQGRES 300
N+L + L E L + L+ + + L E TQK+ E +R C Q V S
Sbjct: 94 NILRQNYDNLASQFESLKKEKQALVSELQRLKEATQKKTQEEERQCSGDQA---VVALSS 150
Query: 301 TPRKVSXKSATKGTPGRISPGRETPDRNLPHYG 399
T + + + P + P E D + H+G
Sbjct: 151 THHESENEENRRRKPEEVRPEMEMKD-DKGHHG 182
>At1g34300.1 68414.m04256 lectin protein kinase family protein
contains Pfam domains, PF01453: Lectin (probable mannose
binding) and PF00069: Protein kinase domain
Length = 829
Score = 28.3 bits (60), Expect = 2.3
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 23 GNGPCSGAASWTRTCRASETWTSCSRSCCSGSPDSRTTCYQW 148
G+ PC + C AS + + S +C P S T YQW
Sbjct: 346 GSSPCRANCLSSVLCLASVSMSDGSGNCWQKHPGSFFTGYQW 387
>At1g50790.1 68414.m05712 hypothetical protein
Length = 812
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 392 WGRFRSGVSRPGLIRPGVPFVALFXD 315
W RFR+ S+P L+ G P +AL+ D
Sbjct: 275 WERFRALQSKPNLLLKGEPRLALWND 300
>At3g04960.1 68416.m00538 expressed protein low similarity to
SP|P32380 NUF1 protein (Spindle poly body spacer protein
SPC110) {Saccharomyces cerevisiae}
Length = 556
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 178 LLEGLIEDHKELMEHTQKRQNEVDRVCKAYQVKS 279
L + +++ H+ELM + R+NEV + K K+
Sbjct: 134 LHDSMMKKHEELMTELEARKNEVALISKTIDAKT 167
>At5g16630.1 68418.m01947 DNA repair protein Rad4 family low
similarity to SP|Q01831 DNA-repair protein complementing
XP-C cells (Xeroderma pigmentosum group C complementing
protein) {Homo sapiens}; contains Pfam profile PF03835:
DNA repair protein Rad4
Length = 865
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 178 LLEGLIEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQGRESTPRKVSXKS 327
+LE E+ +E E ++R+NE + YQ+ S + RE + + S
Sbjct: 736 ILEAYAEE-QEKKEEEERRRNEAQAASRWYQLLSSILTRERLKNRYANNS 784
>At4g09520.1 68417.m01565 2,3-biphosphoglycerate-independent
phosphoglycerate mutase family protein /
phosphoglyceromutase family protein contains similarity
to 2,3-bisphosphoglycerate-independent phosphoglycerate
mutase 1 (EC 5.4.2.1) (Phosphoglyceromutase 1)
(BPG-independent PGAM 1) (aPGAM 1) (aPGAM-Mj1).
(Swiss-Prot:Q59007) [Methanococcus jannaschii]; contains
weak hit to Pfam profile PF01676: Metalloenzyme
superfamily
Length = 492
Score = 26.6 bits (56), Expect = 7.1
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +1
Query: 151 TEPLPESIELLEGLIEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQGRESTPRK 312
T+PL ++ LLE D E HT K NE+ R V V + + K
Sbjct: 172 TDPLKDNRLLLEAKPLDESEEANHTAKVVNELSREISRILVSHPVNVKRAAQGK 225
>At3g30841.1 68416.m03967 2,3-biphosphoglycerate-independent
phosphoglycerate mutase-related /
phosphoglyceromutase-related contains weak similarity to
2,3-bisphosphoglycerate-independent phosphoglycerate
mutase 1 (EC 5.4.2.1) (Phosphoglyceromutase 1)
(BPG-independent PGAM 1) (aPGAM 1) (aPGAM-Mj1).
(Swiss-Prot:Q59007) [Methanococcus jannaschii]
Length = 495
Score = 26.6 bits (56), Expect = 7.1
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +1
Query: 151 TEPLPESIELLEGLIEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQGRESTPRK 312
T+PL ++ LLE D E HT K NE+ R V V + K
Sbjct: 176 TDPLKDNRLLLEAKPLDESEEATHTAKVVNELSREISRILVSHPVNAERAAQGK 229
>At1g15240.1 68414.m01824 phox (PX) domain-containing protein weak
similarity to SP|Q9Y5W8 Sorting nexin 13 {Homo sapiens};
contains Pfam profiles PF00787: PX domain, PF02194: PXA
domain
Length = 706
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 201 PQRTDGAYSEETERSRPRLQSVPGEESGPRKR 296
P G ++T + R Q VPG +SG RKR
Sbjct: 523 PLENSGRSLKKTSKGHERYQQVPGHQSG-RKR 553
>At3g47270.1 68416.m05135 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At3g30450, At4g03990,
At5g34895, At2g02200
Length = 671
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +1
Query: 154 EPLPESIELLEGLIEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQGRESTPRKVSXK 324
E L + + LEG + + +T++ Q E D + + K + +G+E KV +
Sbjct: 268 EVLKKKVGRLEGYLGIQRVPASYTREEQKEEDEKKEQEEEKQEEEGKEEELEKVEYR 324
>At3g20090.1 68416.m02548 cytochrome P450 family protein similar to
Cytochrome P450 93A3 (P450 CP5) (SP:O81973) {Glycine
max}; contains Pfam profile: PF00067 cytochrome P450
Length = 386
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 175 ELLEGLIEDHKELMEHTQKRQNEVDRVCKAYQVKS 279
ELLE +I +HK+ +E + + +D + AY+ K+
Sbjct: 121 ELLERIIVEHKDKLEKEHQVMDMMDVLLAAYRDKN 155
>At2g04970.1 68415.m00518 hypothetical protein similar to At2g15200,
At1g32830, At2g14140, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 808
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +1
Query: 154 EPLPESIELLEGLIEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQGRESTPRKVSXK 324
E L + + LEG + + +T++ Q E D + + K + +G+E KV +
Sbjct: 394 EVLKKKVGRLEGYLGIERVPASYTREEQKEEDEKKEQEEEKQEEEGKEEELEKVEYR 450
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.310 0.128 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,256,531
Number of Sequences: 28952
Number of extensions: 182960
Number of successful extensions: 562
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 675111616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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