Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30216
         (573 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           24   3.1  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   5.3  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   5.3  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           23   7.1  

>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 198 SSTNADSTATVYSPGLGTLTSCWAEKKSRTGATVCTAVST 317
           ++T A +T T  +PG  T T+  +   + TG+T  T  S+
Sbjct: 48  TTTVAPTTTTTVAPGQTTTTTVASGPVTTTGSTDTTTPSS 87


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 489  EMHYYSAGLGNSTTVL 442
            +M Y S+G+G ST+VL
Sbjct: 1786 QMQYSSSGVGGSTSVL 1801


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 489  EMHYYSAGLGNSTTVL 442
            +M Y S+G+G ST+VL
Sbjct: 1787 QMQYSSSGVGGSTSVL 1802


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +3

Query: 198 SSTNADSTATVYSPGLGTLTSCWAEKKSRTGATVCTAVSTGGTLVSSTVCGRP 356
           ++T A +T T  +PG  T T+  A  ++ T       V+T G+  ++T    P
Sbjct: 48  TTTVAPTTTTTVAPGQTTTTTV-APGQTTTTTVASGPVTTTGSTDTTTPSSAP 99


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,455
Number of Sequences: 2352
Number of extensions: 7678
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)