Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30215
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   2.2  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   6.7  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   8.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.8  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -1

Query: 113 FVSLNTISQTVTASLY*PNENYFG 42
           F  ++ +   + +S+  PN NY+G
Sbjct: 337 FEGIDVLGNIIESSILSPNRNYYG 360


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 448 QETKGSDFPEGLQGHDPED 504
           +ETK S+   G    DP+D
Sbjct: 128 RETKSSESDSGASSADPDD 146


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 216 NNERMLRPATETAA 175
           N ER+L P+TE +A
Sbjct: 249 NMERLLAPSTEVSA 262


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 94  IVFSETKLWIFQ 129
           +VFSETKL +F+
Sbjct: 707 LVFSETKLLLFK 718


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,770
Number of Sequences: 336
Number of extensions: 2599
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)