Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30215
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_22624| Best HMM Match : EGF (HMM E-Value=0.0029) 40 0.002
SB_1631| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_52865| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_29891| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_57634| Best HMM Match : EGF_2 (HMM E-Value=0.0014) 36 0.022
SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.066
SB_33401| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 35 0.066
SB_23038| Best HMM Match : EGF_2 (HMM E-Value=2.8e-11) 33 0.20
SB_59103| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_1367| Best HMM Match : EGF_2 (HMM E-Value=5.3e-06) 33 0.20
SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_31771| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_3772| Best HMM Match : EGF (HMM E-Value=6.3e-06) 32 0.47
SB_40488| Best HMM Match : HEAT (HMM E-Value=6.3e-08) 31 0.62
SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23) 31 0.62
SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11) 31 0.62
SB_36893| Best HMM Match : Fibrinogen_C (HMM E-Value=2.4e-24) 31 0.81
SB_31963| Best HMM Match : Integrin_beta (HMM E-Value=0) 31 0.81
SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_52863| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_28991| Best HMM Match : EGF_2 (HMM E-Value=2.9e-06) 30 1.4
SB_36177| Best HMM Match : Integrin_beta (HMM E-Value=0) 30 1.9
SB_36157| Best HMM Match : 7tm_1 (HMM E-Value=4.8e-18) 30 1.9
SB_29802| Best HMM Match : Laminin_EGF (HMM E-Value=0) 30 1.9
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 29 2.5
SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_7506| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05) 29 4.3
SB_47717| Best HMM Match : EGF (HMM E-Value=1.9e-29) 28 5.7
SB_58330| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_38994| Best HMM Match : Integrin_beta (HMM E-Value=0) 28 7.6
SB_26028| Best HMM Match : EGF (HMM E-Value=0.00014) 28 7.6
SB_21858| Best HMM Match : DUF983 (HMM E-Value=1.5) 28 7.6
SB_6581| Best HMM Match : HEAT (HMM E-Value=3e-05) 28 7.6
SB_737| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-35) 28 7.6
>SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 227 ADAVMSVAAKGAGCALSCSGRGDCMNGTCLC--EIRYSGEGCAGPNLP 364
+D V G+GC CSG G C +G C+C ++ Y G CA P+ P
Sbjct: 1636 SDCVCDACYSGSGCNEECSGHGKCEDGKCVCDKDLGYKGPVCAIPSCP 1683
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 257 GAGCALSCSGRGDCMNGTCLCEIRYSGEGCAGPNLPYHACIG 382
G+GC CSG G+C+ G C C +G+ G N C G
Sbjct: 1517 GSGCQSECSGHGECVEGKCKCN-EAAGDAYVGVNCELPGCPG 1557
Score = 38.3 bits (85), Expect = 0.005
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 257 GAGCALSCSGRGDCMNGTCLCE 322
G GC + CSG G C+NG C C+
Sbjct: 1388 GRGCNVECSGHGQCVNGACACD 1409
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +2
Query: 263 GCALSCSGRGDCMNGT--CLCEIRYSGEGCAGPNLP 364
G CSG G+C + T C+CE ++G+GC P+ P
Sbjct: 1296 GHRTDCSGHGECNSATHVCVCENGWTGDGCEIPDCP 1331
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +2
Query: 278 CSGRGDC--MNGTCLCEIRYSGEGC 346
CSG G C N C+C+ +SG GC
Sbjct: 1432 CSGHGTCDSANHKCICDPGWSGIGC 1456
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +2
Query: 278 CSGRGDCMNGT---CLCEIRYSGEGCAGPNL 361
CSG+G+C N C C ++ GE C P L
Sbjct: 1597 CSGQGECSNTNPRRCQCFPKWGGEKCEIPCL 1627
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 257 GAGCALSCSGRGDCMNGTCLCEIRYSGEGCAGPNLPYHACIGG 385
G C C G + G+C+C+ Y+G GC + C+ G
Sbjct: 1492 GPACNDPCV-HGREVAGSCVCDPCYTGSGCQSECSGHGECVEG 1533
>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1530
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 266 CALSCSGRGDCMNGTCLCEIRYSGEGCA-GPNLPYHACI 379
C C G C NGTC+C +Y+G+ C G NL +C+
Sbjct: 305 CDPPCQNSGTCNNGTCICTKQYTGKSCEHGINLVLSSCV 343
Score = 38.3 bits (85), Expect = 0.005
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 260 AGCALSCSGRGDCMNGTCLCEIRYSGEGC 346
AGC C G C+NG C+C + ++G C
Sbjct: 272 AGCLYPCMNGGSCINGKCVCAVGFTGNTC 300
>SB_22624| Best HMM Match : EGF (HMM E-Value=0.0029)
Length = 115
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +2
Query: 266 CALSCSGRGDCMNGTCLCEIRYSGEGCAGPNLPYHACIGGVFLVVAFVCAVQLMICVV 439
C CS G+C N TC+C+ Y+ C+ ++ + G+F+++ V V + + V+
Sbjct: 34 CPNECSNHGNCSNSTCICDKGYTAADCS-MSINTIPELMGLFIIIIIVVVVVVFVVVI 90
>SB_1631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 884
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 266 CALSCSGRGDCMNGTCLCEIRYSGEGCA 349
C CSG G+C N TC CE ++G C+
Sbjct: 724 CPNDCSGNGNCTNRTCTCEEGFTGADCS 751
>SB_52865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 260 AGCALSCSGRGDCMNGTCLCEIRYSGEGCAGPNLPY 367
A C CSG G C +G C C+ ++ G C NLP+
Sbjct: 141 ANCTNGCSGHGACDSGVCQCQSQWHGVSC---NLPW 173
>SB_29891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 36.7 bits (81), Expect = 0.016
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 272 LSCSGRGDCMNGTCLCEIRYSGEGC 346
L C+GRG C G C+C+ ++G GC
Sbjct: 338 LDCNGRGTCQMGECVCDHPWTGPGC 362
>SB_57634| Best HMM Match : EGF_2 (HMM E-Value=0.0014)
Length = 198
Score = 36.3 bits (80), Expect = 0.022
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 266 CALSCSGRGDCMNGTCLCEIRYSGEGCA 349
C CSG G+C N TC+C Y+G C+
Sbjct: 62 CPNDCSGLGNCTNRTCICLDGYTGADCS 89
>SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1017
Score = 36.3 bits (80), Expect = 0.022
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 266 CALSCSGRGDCMNGTCLCEIRYSGEGCA 349
C CSG G+C N TC+C Y+G C+
Sbjct: 380 CPNDCSGLGNCTNRTCICLDGYTGADCS 407
>SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5834
Score = 34.7 bits (76), Expect = 0.066
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 263 GCALSCSGRGDCM-NGTCLCEIRYSGEGCAGPNLP 364
G CSG G C+ +G C C+ + G GC P+ P
Sbjct: 82 GYKTDCSGHGSCLADGKCYCDPGWKGVGCHIPHCP 116
Score = 33.5 bits (73), Expect = 0.15
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 254 KGAGCALSCSGRGDCMNGTCLCEIRYSGEGC 346
+G C + CSG G C C+C+ + G C
Sbjct: 302 QGLACDVECSGHGKCNGSHCICDEGHKGVTC 332
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Frame = +2
Query: 230 DAVMSVAAKGAGCALSCSGRGDCMNGTCLCEIRYSGEGCAGPNLPYH--ACIG-GVFLVV 400
+ V S G C C G C +G C C+ Y G C P + C G GV L V
Sbjct: 166 ECVCSDCFTGVFCDKECDSHGVCRDGKCSCDKGYRGAKCETIGCPGNNVDCSGHGVCLSV 225
Query: 401 AFVC 412
C
Sbjct: 226 TQEC 229
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +2
Query: 263 GCALSCSGRGDCMNGT--CLCEIRYSGEGCAGPN 358
G + CSG G C++ T C C + G+GC P+
Sbjct: 211 GNNVDCSGHGVCLSVTQECDCYRGWKGDGCHVPD 244
>SB_33401| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4277
Score = 34.7 bits (76), Expect = 0.066
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 266 CALSCSGRGDCMNGTCLCEIRYSGEGCA 349
C CSGRG C+ TC C ++G C+
Sbjct: 360 CPNQCSGRGRCVKNTCKCRGGWAGSDCS 387
>SB_23038| Best HMM Match : EGF_2 (HMM E-Value=2.8e-11)
Length = 1477
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 227 ADAVMSVAAKGAGCALSCSGRGDCM-NGTCLCEIRYSGEGCA 349
++A +++ C +CS G C+ TC+C+ ++SG C+
Sbjct: 1335 SNATITITTCTYTCENNCSNHGQCVARDTCVCDQKFSGNDCS 1376
Score = 32.3 bits (70), Expect = 0.35
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 266 CALSCSGRGDCM-NGTCLCEIRYSGEGCA 349
C +CS G C+ TC+C+ ++SG C+
Sbjct: 1380 CENNCSNHGQCVARDTCVCDQKFSGNDCS 1408
>SB_59103| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 33.1 bits (72), Expect = 0.20
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +2
Query: 584 ATSLLSAYYPLLMSGSSLIVCF 649
A +L S YYP+++SG S+++CF
Sbjct: 8 APNLFSVYYPMIISGFSILICF 29
>SB_1367| Best HMM Match : EGF_2 (HMM E-Value=5.3e-06)
Length = 776
Score = 33.1 bits (72), Expect = 0.20
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 266 CALSCSGRGDCMNGTCLCEIRYSGEGCA 349
C C+G G C C C++ Y+G C+
Sbjct: 720 CPDDCNGHGKCRERICTCDVGYTGADCS 747
>SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 32.7 bits (71), Expect = 0.27
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +2
Query: 275 SCSGRGDCM-NGTCLCEIRYSGEGCA 349
+CS RG+C +G C C++ Y+G C+
Sbjct: 156 NCSNRGECFESGFCKCDVGYTGPDCS 181
Score = 31.9 bits (69), Expect = 0.47
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 278 CSGRGDCMNG-TCLCEIRYSGEGCAGPN 358
CSGRG C+N C C ++G CA P+
Sbjct: 50 CSGRGSCVNAYRCECNSGWTGISCAVPD 77
>SB_31771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1963
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 353 PNLPYHACIGGVFLVVAFVCAVQLMICVVTEYRKLKAPTFLRACKVT 493
P + A IG L++AF C + L +C+ + + P F AC VT
Sbjct: 670 PRWTWVAIIGAGTLILAFTCMLLLAVCLKSAVLEALHPIFDTACAVT 716
>SB_3772| Best HMM Match : EGF (HMM E-Value=6.3e-06)
Length = 519
Score = 31.9 bits (69), Expect = 0.47
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 260 AGCALSCSGRGDCMN-GTCLCEIRYSGEGC 346
A C L C G C++ TC C+ Y+GE C
Sbjct: 487 AQCGLPCLNGGSCVSRNTCACKKGYTGERC 516
>SB_40488| Best HMM Match : HEAT (HMM E-Value=6.3e-08)
Length = 1185
Score = 31.5 bits (68), Expect = 0.62
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 422 LMICVVTEYRKLKAPTFLRACKVTTQKMLYLVAFLASLIRGAYFVSPSAFQXGWATSLLS 601
L+I +V + ++AP F A +++ L+L+ AS +R YF A++ L+S
Sbjct: 779 LLISLVLQASAVRAPYFSCASGISSTCSLFLLCIQASAVRAPYF--SCAYRHQQYVLLIS 836
Query: 602 AYYPLLMSGSSL-IVCF 649
+ + S SL ++CF
Sbjct: 837 LVHTGISSTCSLFLLCF 853
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 422 LMICVVTEYRKLKAPTFLRACKVTTQKMLYLVAFLASLIRGAYF 553
L+I +V + ++AP F A +++ L+L+ AS +R YF
Sbjct: 725 LLISLVLQASAVRAPYFSCASGISSTCSLFLLCIQASAVRAPYF 768
>SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23)
Length = 300
Score = 31.5 bits (68), Expect = 0.62
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = +2
Query: 257 GAGCALSCSG--RG---DCMNGTCLCEIRYSGEGC 346
G GC+ CS G D +NGTC C+ ++GE C
Sbjct: 95 GYGCSKKCSNCQHGATCDPVNGTCSCQTGWTGENC 129
>SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11)
Length = 3369
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +2
Query: 266 CALSCSGRGDCMNGTCLCEIRYSGEGCAGPNL-PYHACIGGVFLVVAFVC 412
C C GDC+ TC C ++G C+ + H C G V VC
Sbjct: 2254 CPNGCFHNGDCIGSTCFCYRGWTGHDCSQFHCRDVHECSGFGTCVGPNVC 2303
>SB_36893| Best HMM Match : Fibrinogen_C (HMM E-Value=2.4e-24)
Length = 411
Score = 31.1 bits (67), Expect = 0.81
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 275 SCSGRGDCMNGTCLCEIRYSGEGC 346
SC+ + D +N TC C + Y GE C
Sbjct: 159 SCTDKSDGLNYTCACRMGYEGEIC 182
>SB_31963| Best HMM Match : Integrin_beta (HMM E-Value=0)
Length = 628
Score = 31.1 bits (67), Expect = 0.81
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +2
Query: 176 AAVSVAGRNMRSLLAYYADAVMSVAAKGAGCALSCSGRGDCMNGTCLCEIRYSGEGCAGP 355
A+ S GR + SL A ++ + A G S G C G C C +YSG+ C
Sbjct: 445 ASPSSLGRTVESLTARESNTDATAQAARGG-----SDHGTCTCGQCTCTRKYSGKYC--E 497
Query: 356 NLPYHACIGGV 388
P +C GG+
Sbjct: 498 ECP--SCEGGI 506
>SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1387
Score = 31.1 bits (67), Expect = 0.81
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +2
Query: 266 CALSCSGRGDCMNGTCLCEIR--YSGEGCAGPNLPYHAC 376
C CS G C+ G C+C+ ++G CA + + C
Sbjct: 806 CVNGCSKHGKCIRGFCICDHSHYFNGAECAPYKISHRPC 844
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -2
Query: 553 EVSSPYQGGEESDQIQHLLGRDLASPQES 467
E SSPYQG + SDQ G AS Q S
Sbjct: 231 EQSSPYQGDQTSDQSSPFQGDQTASYQGS 259
>SB_52863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +2
Query: 266 CALSCSGRGDC--MNGTCLCEIRYSGEGCA 349
C +CSG G C +G C C Y+G C+
Sbjct: 364 CPNNCSGHGSCNSASGLCTCAPGYAGTDCS 393
>SB_28991| Best HMM Match : EGF_2 (HMM E-Value=2.9e-06)
Length = 263
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +2
Query: 242 SVAAKGAGCALSCSGRGDC--MNGTCLCEIRYSGEGCAGPNLP 364
++A + C CS G C + G C CE Y CA P P
Sbjct: 80 ALAEQRISCPKDCSHHGVCDKLTGVCSCEKGYLPPDCAAPVNP 122
>SB_36177| Best HMM Match : Integrin_beta (HMM E-Value=0)
Length = 722
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +2
Query: 257 GAGCALSCSGRGDCMNGTCLCEIR--YSGEGC 346
G G + CSGRG C G C+C Y G C
Sbjct: 526 GQGGKVLCSGRGTCECGQCVCNATSGYVGAFC 557
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +2
Query: 257 GAGCALSCSGRGDCMNGTCLC-EIRYSGE 340
G A CSGRG C G C+C E + GE
Sbjct: 429 GNSTAQVCSGRGVCDCGECICTESKTKGE 457
>SB_36157| Best HMM Match : 7tm_1 (HMM E-Value=4.8e-18)
Length = 474
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +2
Query: 407 VCAVQLMICVVTEYRKLKAPTFLRACKVTTQKMLYLVAFLASLIRGAYFV 556
VCA+ L+ + YR L P TT M+ + ++ L +Y +
Sbjct: 127 VCAITLLFISIERYRALSKPLIAAPITRTTLSMMIAITWVLGLATNSYIL 176
>SB_29802| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 546
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 266 CALSCSGRGDC-MNGTCLCEIRYSGEGC 346
CA S SG G C G C+C Y+G C
Sbjct: 93 CACSNSGFGTCGQYGECICRPGYTGRSC 120
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 29.5 bits (63), Expect = 2.5
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 260 AGCALSCSGRGDCMNGTCLCEIRYSGEGC 346
A + +C G C++G C C ++G C
Sbjct: 2335 AAASCNCENGGKCVDGVCQCPAGHTGANC 2363
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 7/40 (17%)
Frame = +2
Query: 257 GAGCALSCSGRGDCMNGT-------CLCEIRYSGEGCAGP 355
G ++CS + DC+NG+ C+C R +G+ C P
Sbjct: 496 GGSWGVNCSSKCDCINGSCDPVTGACVCNRRVTGQRCDKP 535
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +2
Query: 257 GAGCALSCS----GRGDCMNGTCLCEIRYSGEGC 346
G GC +C+ + D + GTC C + Y G+ C
Sbjct: 862 GPGCHNNCTCLNGAQCDHVTGTCTCPVGYKGKYC 895
>SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1286
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 254 KGAGCALSCSGRGDCMNGTCLCEIRYSGEGCAGPN 358
K A C C G C+N C C Y+ E C N
Sbjct: 468 KQAECVPECLNGGVCVNRQCQCPQGYTMEACQKVN 502
>SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 278 CSGRGDCMNGTCLCEIRYSGEG 343
CS DC+ G C+C+ Y G+G
Sbjct: 251 CSVNADCILGHCVCKDGYHGDG 272
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 266 CALSCSGRGDCMNGTCLCEIRYSGEG 343
CA C C NG C+C Y G+G
Sbjct: 390 CA-KCDMHATCRNGKCVCMEGYEGDG 414
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Frame = +2
Query: 278 CSGRGDCMNGTCLCEIRYSGEG--CAGPNLP-YHA---CIGG 385
C+ C+ G C+C Y G G C P P HA C+ G
Sbjct: 542 CNPNAHCLKGVCVCFDHYIGNGYNCQPPCTPTCHAPSTCVSG 583
>SB_7506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +2
Query: 278 CSGRGDCMNGTCLC--EIRYSGEGC 346
CSGRG+C G C+C + Y G C
Sbjct: 2 CSGRGECECGKCVCNASLPYIGVYC 26
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Frame = +2
Query: 230 DAVMSVAAKGAGCALS-CSGRGDCMNG-----TCLCEIRYSGEGC 346
D ++A G C+ + C G C +C C +R+SGE C
Sbjct: 1296 DVRQAIADAGTPCSSNPCQNGGTCTEAAAGRYSCACPVRFSGEHC 1340
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = +2
Query: 275 SCSGRGDCMNGT----CLCEIRYSGEGC 346
+CSGRG+C++ C C YSG+ C
Sbjct: 2667 TCSGRGNCISQVSSYLCNCTTDYSGKDC 2694
>SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05)
Length = 117
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +2
Query: 266 CALSCSGRGDCMNGTCLCEIR--YSGEGCA 349
C CS G C+ G C+C+ ++G CA
Sbjct: 39 CVNGCSKHGKCIRGFCICDHSHYFNGAECA 68
>SB_47717| Best HMM Match : EGF (HMM E-Value=1.9e-29)
Length = 214
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = +2
Query: 278 CSGRGDCMNG----TCLCEIRYSGEGCAGPNLPYHACI 379
CS G C++G TC C + Y+G C N+ + CI
Sbjct: 95 CSEHGACIDGVNSYTCACNLGYTGSTC---NVTVNDCI 129
>SB_58330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -3
Query: 540 RIREARKATRYSIFWVVTLQALRKVGAFSFLYSVTTHIISWTAHTKATTRKTP 382
RIREA + T FW V + K G + ++ H++S TRK P
Sbjct: 175 RIREAAQTTDKETFW-VGANDMEKYGTYQWI-DGRAHVVSEVMWGSRKTRKQP 225
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = +2
Query: 278 CSGRGDCMNG----TCLCEIRYSGEGCAGPNLPYHACI 379
CS G C++G TC C + Y+G C N+ + CI
Sbjct: 674 CSEHGACIDGVNSYTCACNLGYTGSTC---NVTVNDCI 708
>SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 848
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +2
Query: 275 SCSGRGDCMNGTCLCEIRY--SGEGCAGPN 358
SC CM G C+C Y G+ C G N
Sbjct: 815 SCPPNSHCMRGVCVCGKGYYFDGKHCVGKN 844
>SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 278 CSGRGDCMNGTCLCEIRYSGEG 343
C +C+NGTC C + G G
Sbjct: 386 CDLNAECLNGTCECRSGFVGNG 407
>SB_38994| Best HMM Match : Integrin_beta (HMM E-Value=0)
Length = 467
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 278 CSG--RGDCMNGTCLCEIRYSGEGCAGPNLPYHACIGGV 388
C G RG C G C C +Y+G+ C P +C GG+
Sbjct: 275 CGGPDRGTCECGKCKCNRKYTGQYC--EECP--SCEGGI 309
>SB_26028| Best HMM Match : EGF (HMM E-Value=0.00014)
Length = 416
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 266 CALSCSGRGDCMNGTCLCEIRYSGEGC 346
C ++ + R D ++G+CLC+ + G+ C
Sbjct: 187 CHMTNTDRCDHVDGSCLCKAGFQGDRC 213
>SB_21858| Best HMM Match : DUF983 (HMM E-Value=1.5)
Length = 238
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +2
Query: 284 GRGDCMNGTCLCEIRYSGEGCAGPNLPYHACIGGVFLVVAFVCAVQLMICVV 439
G D +N C+ +GC G + + C+ + +++ V LM+ V+
Sbjct: 54 GDSDFINNDRSCDGCGGDDGCGGDYIDGYGCVVVMIMIIVAVVVTLLMMTVI 105
>SB_6581| Best HMM Match : HEAT (HMM E-Value=3e-05)
Length = 1188
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -1
Query: 650 KSTRSATIQTSTGDNKPIEDWSPIXLEKQTAKRSKLPVSG 531
K+ +S +QT T DN P D P+ + + +R K+ ++G
Sbjct: 778 KNKKSNQLQTPTDDNSP--DQRPVPSQPERDRRRKVVIAG 815
>SB_737| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-35)
Length = 432
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +2
Query: 374 CIGGVFLVVAFVCAVQLMICVVTEYRKLKAPTFLRACKVTTQKMLYLVAFLASLIRGAYF 553
C FL+ + A L ICV++ R LK C V K + ++ L ++ +
Sbjct: 161 CKVNAFLITELLLASMLTICVISVNRYLKIVKPRVYCSVFNSKTISVIILLIWVLPLLFS 220
Query: 554 VSP 562
V P
Sbjct: 221 VPP 223
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,622,744
Number of Sequences: 59808
Number of extensions: 325914
Number of successful extensions: 1347
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1342
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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