Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30215
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    33   0.010
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    32   0.014
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        28   0.22 
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        28   0.22 
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        28   0.22 
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        28   0.22 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    26   1.2  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   3.6  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    23   6.3  
Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase pr...    23   8.4  
DQ370047-1|ABD18608.1|   89|Anopheles gambiae putative secreted ...    23   8.4  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           23   8.4  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           23   8.4  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   8.4  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 32.7 bits (71), Expect = 0.010
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 248 AAKGAGCALSCSGRGDCMNGTCLCEIR 328
           A + +  +  CSGRG C+ G C+CE R
Sbjct: 550 ACRMSNASEECSGRGQCVCGVCVCERR 576



 Score = 30.3 bits (65), Expect = 0.055
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 4/27 (14%)
 Frame = +2

Query: 278 CSGRGDCMNGTCLCEI----RYSGEGC 346
           CSG G C  GTC C +    RY+G  C
Sbjct: 645 CSGHGTCECGTCRCTVTEDGRYTGRYC 671



 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
 Frame = +2

Query: 272 LSCSG--RGDCMNGTCLCEIRYSGEGC 346
           L CSG   G C+ G C C   ++G  C
Sbjct: 601 LLCSGPDHGRCVCGQCECREGWTGPAC 627



 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 278 CSGRGDCMNGTCLCEIRYSGEGC 346
           CS  G    G C C+  Y G+ C
Sbjct: 512 CSNAGTYKCGICECDGTYHGQRC 534


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 32.3 bits (70), Expect = 0.014
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 278 CSGRGDCMNGTCLCEIRYSGEGC 346
           CS RG+C+ G C C   + GE C
Sbjct: 535 CSDRGECICGQCYCNPGFEGEHC 557



 Score = 28.3 bits (60), Expect = 0.22
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 278 CSGRGDCMNGTCLCEIRYSGEGC 346
           CSG G C  G C C+  + G  C
Sbjct: 612 CSGHGQCNCGRCSCDESFFGPFC 634



 Score = 25.4 bits (53), Expect = 1.6
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
 Frame = +2

Query: 278 CSG--RGDCMNGTCLCEIRYSGEGC 346
           C G   G C  GTC C   +SG+ C
Sbjct: 570 CGGPDHGICTCGTCSCFDSWSGDNC 594



 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 278 CSGRGDCMNGTCLCEIRYSGEGC 346
           C+  GD + G C C + + G+ C
Sbjct: 481 CNFNGDYVCGQCQCYVGWIGKTC 503


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 28.3 bits (60), Expect = 0.22
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 278 CSGRGDCMNGTCLCEIRYSGEGC 346
           CSG G C  G C C+  + G  C
Sbjct: 36  CSGHGQCNCGRCSCDESFFGPFC 58



 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 296 CMNGTCLCEIRYSGEGC 346
           C  GTC C   +SG+ C
Sbjct: 2   CTCGTCSCFDSWSGDNC 18


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 28.3 bits (60), Expect = 0.22
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 278 CSGRGDCMNGTCLCEIRYSGEGC 346
           CSG G C  G C C+  + G  C
Sbjct: 36  CSGHGQCNCGRCSCDESFFGPFC 58



 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 296 CMNGTCLCEIRYSGEGC 346
           C  GTC C   +SG+ C
Sbjct: 2   CTCGTCSCFDSWSGDNC 18


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 28.3 bits (60), Expect = 0.22
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 278 CSGRGDCMNGTCLCEIRYSGEGC 346
           CSG G C  G C C+  + G  C
Sbjct: 36  CSGHGQCNCGRCSCDESFFGPFC 58



 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 296 CMNGTCLCEIRYSGEGC 346
           C  GTC C   +SG+ C
Sbjct: 2   CTCGTCSCFDSWSGDNC 18


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 28.3 bits (60), Expect = 0.22
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 278 CSGRGDCMNGTCLCEIRYSGEGC 346
           CSG G C  G C C+  + G  C
Sbjct: 36  CSGHGQCNCGRCSCDESFFGPFC 58



 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 296 CMNGTCLCEIRYSGEGC 346
           C  GTC C   +SG+ C
Sbjct: 2   CTCGTCSCFDSWSGDNC 18


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +2

Query: 257 GAGCALSCSGRGDCMNGTCLCEIRYSGEGCAGP 355
           G  C   C      MNGTC+     +  GC GP
Sbjct: 547 GRFCVAECPTTKHAMNGTCI-NCHKTCVGCRGP 578


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 426 ISWTAHTKATTRKTPPIHA*YGRLGPAQPSPE 331
           +SW  H  A T++   I    GRL P    P+
Sbjct: 761 LSWIPHVTAVTQRAVQIAQAVGRLMPNHRGPK 792


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +2

Query: 515 VAFLASLIRGAYFVSPSAFQXGWATSLLSAYYPLLMSGSSLIVC 646
           +A +  LIR    + P+AF+  + T L     P  +  S + VC
Sbjct: 237 LALVIILIRAGLEMDPTAFKKIYKTILKLGLIPWFVECSLIAVC 280


>Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase
           protein.
          Length = 237

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 335 GEGCAGPNLP 364
           GEGCA PN P
Sbjct: 200 GEGCARPNYP 209


>DQ370047-1|ABD18608.1|   89|Anopheles gambiae putative secreted
           peptide protein.
          Length = 89

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = +2

Query: 263 GCALSCSGRGDCMNGTCLCEIRYSGEGCAGPNLPYHAC 376
           GC  +C G    M   C C I Y  +  +G  +    C
Sbjct: 39  GCDDNCQGSCIPMKDFCACRIGYKRDLTSGKCIAADQC 76


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 218 PTTNACYDQRRRPPLFTTVAV 156
           PTT   +  + RPP  TT  V
Sbjct: 168 PTTTTTWSDQPRPPTTTTTTV 188


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 218 PTTNACYDQRRRPPLFTTVAV 156
           PTT   +  + RPP  TT  V
Sbjct: 168 PTTTTTWSDQPRPPTTTTTTV 188


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 137 SRCWNIHNFVSLNTISQTVTASLY*PNE 54
           SRC N+ +++     S T+  S+Y  NE
Sbjct: 62  SRCDNVISYIKNGKDSATIRISIYRNNE 89


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,923
Number of Sequences: 2352
Number of extensions: 11209
Number of successful extensions: 41
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)