Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30215
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         25   0.63 
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    23   1.9  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   1.9  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          22   5.9  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    21   7.8  

>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 9/24 (37%), Positives = 13/24 (54%), Gaps = 4/24 (16%)
 Frame = +2

Query: 260 AGCALSCSGR----GDCMNGTCLC 319
           + CA+ C  +    G C NG C+C
Sbjct: 79  SACAIRCLAQRRKGGSCRNGVCIC 102


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 574 RXMGDQSSIGLLSPVDVWIVADRV 645
           +  GD  S+G L P + +IV+ RV
Sbjct: 85  KDFGDVDSLGNLDPANEFIVSTRV 108


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 574 RXMGDQSSIGLLSPVDVWIVADRV 645
           +  GD  S+G L P + +IV+ RV
Sbjct: 101 KDFGDVDSLGNLDPANEFIVSTRV 124


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/50 (24%), Positives = 22/50 (44%)
 Frame = +2

Query: 377 IGGVFLVVAFVCAVQLMICVVTEYRKLKAPTFLRACKVTTQKMLYLVAFL 526
           +G +  V   V +   ++  + + RK    +  R  K+T    L + AFL
Sbjct: 72  LGLIVPVFTIVSSYAAIVLTLKKVRKRAGASGRREAKITKMVALMITAFL 121


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/24 (33%), Positives = 10/24 (41%)
 Frame = +2

Query: 248 AAKGAGCALSCSGRGDCMNGTCLC 319
           +A  A C       G C  G C+C
Sbjct: 58  SACAANCLSLGKAGGHCEKGVCIC 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,236
Number of Sequences: 438
Number of extensions: 3069
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)