Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30214
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   1.9  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   5.9  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   7.8  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 51  LKKCIIFFNHFYSYDL 4
           LK C+I+FN  + +++
Sbjct: 144 LKNCVIYFNRIFGWNI 159


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +2

Query: 74  VEEARRFMEDSLTAVGAPVSEAKAQADLL 160
           V++ RRF+ED    +    +  K   D++
Sbjct: 150 VDDLRRFLEDHTEEIDVKTAMKKYSVDII 178


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 75  TSTSGMTVLKKCIIFFNHFY 16
           T   GMTV K  + FFN  +
Sbjct: 175 TVAHGMTVQKTTLFFFNRTF 194


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 179 GHYSHGLNRLEFYINDIL 232
           GHY + L+++E   N+IL
Sbjct: 211 GHYKNFLSQVEIIHNEIL 228


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 179 GHYSHGLNRLEFYINDIL 232
           GHY + L+++E   N+IL
Sbjct: 36  GHYKNFLSQVEIIHNEIL 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,071
Number of Sequences: 336
Number of extensions: 3682
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)