Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30214
(733 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D83692-1|BAA12059.1| 118|Homo sapiens IgM protein. 32 1.8
CR456403-1|CAG30289.1| 357|Homo sapiens bK268H5.4 protein. 32 1.8
BC013696-1|AAH13696.1| 357|Homo sapiens family with sequence si... 32 1.8
AL008718-6|CAI17949.1| 357|Homo sapiens protein ( Human DNA seq... 32 1.8
AK000642-1|BAA91301.1| 357|Homo sapiens protein ( Homo sapiens ... 32 1.8
DQ926649-1|ABI50508.1| 110|Homo sapiens immunoglobulin heavy ch... 31 4.3
AF174079-1|AAD53825.1| 127|Homo sapiens immunoglobulin heavy ch... 31 4.3
AM080163-1|CAL04309.1| 97|Homo sapiens immunoglobulin heavy ch... 31 5.6
BC104867-1|AAI04868.1| 367|Homo sapiens hypothetical protein DK... 30 9.8
BC104865-1|AAI04866.1| 367|Homo sapiens hypothetical protein DK... 30 9.8
BC044570-1|AAH44570.1| 367|Homo sapiens hypothetical protein DK... 30 9.8
BC033561-1|AAH33561.1| 373|Homo sapiens Unknown (protein for IM... 30 9.8
>D83692-1|BAA12059.1| 118|Homo sapiens IgM protein.
Length = 118
Score = 32.3 bits (70), Expect = 1.8
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +2
Query: 305 CDALGATVGNFCMDVAIRKAQEAGVGWVAARRSNHYGMAGYWALKAEKQGLIGLSFTNSS 484
C A G T G++ M +R+A G+ WV RSN YG G A +G +S +S
Sbjct: 22 CTASGFTFGDYAMSW-VRQAPGKGLEWVGFIRSNAYG--GTTEYAASVKGRFTISRDDSK 78
Query: 485 PI 490
I
Sbjct: 79 SI 80
>CR456403-1|CAG30289.1| 357|Homo sapiens bK268H5.4 protein.
Length = 357
Score = 32.3 bits (70), Expect = 1.8
Identities = 26/80 (32%), Positives = 37/80 (46%)
Frame = +2
Query: 140 KAQADLLIHADTVGHYSHGLNRLEFYINDILSKATDPCAKPVILKESAATALVDGCDALG 319
K QAD+L+H V Y + Y+ D+ AT C K+ + A D D+
Sbjct: 273 KHQADMLLHGIKVVSYGDCFDHFPGYVQDL---ATQIC------KQQSPDA--DRVDST- 320
Query: 320 ATVGNFCMDVAIRKAQEAGV 379
+GN C D A RK +E G+
Sbjct: 321 TLLGNACQDCAKRKLEENGI 340
>BC013696-1|AAH13696.1| 357|Homo sapiens family with sequence
similarity 118, member A protein.
Length = 357
Score = 32.3 bits (70), Expect = 1.8
Identities = 26/80 (32%), Positives = 37/80 (46%)
Frame = +2
Query: 140 KAQADLLIHADTVGHYSHGLNRLEFYINDILSKATDPCAKPVILKESAATALVDGCDALG 319
K QAD+L+H V Y + Y+ D+ AT C K+ + A D D+
Sbjct: 273 KHQADMLLHGIKVVSYGDCFDHFPGYVQDL---ATQIC------KQQSPDA--DRVDST- 320
Query: 320 ATVGNFCMDVAIRKAQEAGV 379
+GN C D A RK +E G+
Sbjct: 321 TLLGNACQDCAKRKLEENGI 340
>AL008718-6|CAI17949.1| 357|Homo sapiens protein ( Human DNA
sequence from clone CTA-268H5 on chromosome
22q13.2-13.3. ).
Length = 357
Score = 32.3 bits (70), Expect = 1.8
Identities = 26/80 (32%), Positives = 37/80 (46%)
Frame = +2
Query: 140 KAQADLLIHADTVGHYSHGLNRLEFYINDILSKATDPCAKPVILKESAATALVDGCDALG 319
K QAD+L+H V Y + Y+ D+ AT C K+ + A D D+
Sbjct: 273 KHQADMLLHGIKVVSYGDCFDHFPGYVQDL---ATQIC------KQQSPDA--DRVDST- 320
Query: 320 ATVGNFCMDVAIRKAQEAGV 379
+GN C D A RK +E G+
Sbjct: 321 TLLGNACQDCAKRKLEENGI 340
>AK000642-1|BAA91301.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ20635 fis, clone KAT03466. ).
Length = 357
Score = 32.3 bits (70), Expect = 1.8
Identities = 26/80 (32%), Positives = 37/80 (46%)
Frame = +2
Query: 140 KAQADLLIHADTVGHYSHGLNRLEFYINDILSKATDPCAKPVILKESAATALVDGCDALG 319
K QAD+L+H V Y + Y+ D+ AT C K+ + A D D+
Sbjct: 273 KHQADMLLHGIKVVSYGDCFDHFPGYVQDL---ATQIC------KQQSPDA--DRVDST- 320
Query: 320 ATVGNFCMDVAIRKAQEAGV 379
+GN C D A RK +E G+
Sbjct: 321 TLLGNACQDCAKRKLEENGI 340
>DQ926649-1|ABI50508.1| 110|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 110
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 305 CDALGATVGNFCMDVAIRKAQEAGVGWVAARRSNHYG 415
C A G T G++ ++ +R+A G+ WV RSN YG
Sbjct: 22 CTASGFTFGDYVINW-VRQAPGKGLEWVGIIRSNSYG 57
>AF174079-1|AAD53825.1| 127|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 127
Score = 31.1 bits (67), Expect = 4.3
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 305 CDALGATVGNFCMDVAIRKAQEAGVGWVAARRSNHYGMAGYWALKAEKQGLIGLSFTNSS 484
C A G T ++ + R+A G+ WVA +S YG G++A A +G +S +S
Sbjct: 22 CSASGFTFDDYTVGW-FRQAPGQGLQWVAFIKSKRYGETGHYA--ASVKGRFSISRDDSK 78
Query: 485 PI 490
I
Sbjct: 79 SI 80
>AM080163-1|CAL04309.1| 97|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 97
Score = 30.7 bits (66), Expect = 5.6
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 305 CDALGATVGNFCMDVAIRKAQEAGVGWVAARRSNHY 412
C A G GN+ M +R+A G+GWVA S +Y
Sbjct: 25 CAASGFVFGNYAMSW-VRQAPGKGLGWVATGGSPYY 59
>BC104867-1|AAI04868.1| 367|Homo sapiens hypothetical protein
DKFZp564O0523 protein.
Length = 367
Score = 29.9 bits (64), Expect = 9.8
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +2
Query: 92 FMEDSLTAVGAPVSEAK-AQADLLIHADTVGHYSHGLNRLEFYINDILSKATDPCAKPVI 268
F + + G PV A + D H T+GHY+H + + IN + + P A+ I
Sbjct: 206 FSSKCMCSSGGPVDRAPDSSKDGRNHHKTMGHYNHNDSLRKTQINSLKNSVACPGAQKAI 265
Query: 269 LKESA 283
A
Sbjct: 266 TSSEA 270
>BC104865-1|AAI04866.1| 367|Homo sapiens hypothetical protein
DKFZp564O0523 protein.
Length = 367
Score = 29.9 bits (64), Expect = 9.8
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +2
Query: 92 FMEDSLTAVGAPVSEAK-AQADLLIHADTVGHYSHGLNRLEFYINDILSKATDPCAKPVI 268
F + + G PV A + D H T+GHY+H + + IN + + P A+ I
Sbjct: 206 FSSKCMCSSGGPVDRAPDSSKDGRNHHKTMGHYNHNDSLRKTQINSLKNSVACPGAQKAI 265
Query: 269 LKESA 283
A
Sbjct: 266 TSSEA 270
>BC044570-1|AAH44570.1| 367|Homo sapiens hypothetical protein
DKFZp564O0523 protein.
Length = 367
Score = 29.9 bits (64), Expect = 9.8
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +2
Query: 92 FMEDSLTAVGAPVSEAK-AQADLLIHADTVGHYSHGLNRLEFYINDILSKATDPCAKPVI 268
F + + G PV A + D H T+GHY+H + + IN + + P A+ I
Sbjct: 206 FSSKCMCSSGGPVDRAPDSSKDGRNHHKTMGHYNHNDSLRKTQINSLKNSVACPGAQKAI 265
Query: 269 LKESA 283
A
Sbjct: 266 TSSEA 270
>BC033561-1|AAH33561.1| 373|Homo sapiens Unknown (protein for
IMAGE:4825968) protein.
Length = 373
Score = 29.9 bits (64), Expect = 9.8
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +2
Query: 92 FMEDSLTAVGAPVSEAK-AQADLLIHADTVGHYSHGLNRLEFYINDILSKATDPCAKPVI 268
F + + G PV A + D H T+GHY+H + + IN + + P A+ I
Sbjct: 212 FSSKCMCSSGGPVDRAPDSSKDGRNHHKTMGHYNHNDSLRKTQINSLKNSVACPGAQKAI 271
Query: 269 LKESA 283
A
Sbjct: 272 TSSEA 276
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,789,448
Number of Sequences: 237096
Number of extensions: 2192957
Number of successful extensions: 9784
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 9589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9780
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -