Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30214
         (733 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49127-10|CAA88951.1|  400|Caenorhabditis elegans Hypothetical p...   221   5e-58
AL033535-3|CAA22133.1|  400|Caenorhabditis elegans Hypothetical ...   221   5e-58
Z96047-9|CAB09417.1|  372|Caenorhabditis elegans Hypothetical pr...   188   5e-48
Z81077-16|CAB03073.1|  372|Caenorhabditis elegans Hypothetical p...   188   5e-48
U40945-5|AAS80344.1|  617|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z81124-8|CAD56599.1|  426|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z81039-4|CAB02776.1|  361|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z49127-10|CAA88951.1|  400|Caenorhabditis elegans Hypothetical
           protein VF13D12L.3 protein.
          Length = 400

 Score =  221 bits (539), Expect = 5e-58
 Identities = 106/197 (53%), Positives = 137/197 (69%), Gaps = 1/197 (0%)
 Frame = +2

Query: 68  VLVEEARRFMEDSLTAVGAPVSEAKAQADLLIHADTVGHYSHGLNRLEFYINDILSKATD 247
           V  +E +RFM + +T VGA  S A   A +L+  D  GHYSHGLNRL+ Y+ DI      
Sbjct: 49  VAKDEMKRFMVECMTKVGATESHATQLALVLLEGDIRGHYSHGLNRLDMYVRDIEQNVCK 108

Query: 248 PCAKPVILKESAATALVDGCDALGATVGNFCMDVAIRKAQEAGVGWVAARRSNHYGMAGY 427
              +P+ILKE A TA VDG + LG  VGNFCMD+AI KA+ AG+GWV A+ SNHYG+AG+
Sbjct: 109 GDGEPIILKEKAGTAWVDGNNLLGPVVGNFCMDLAIEKAKNAGIGWVVAKGSNHYGIAGW 168

Query: 428 WALKAEKQGLIGLSFTNSSPILVPTRSKTSALGTNPIALAAPAKNGDNLVVDLATTAVAM 607
           +AL+A K+G++G+S TN+SPI  PTRS   ALGTNPI+LAAP    D+ V+D+A+T VA+
Sbjct: 169 YALRAMKKGMLGMSMTNTSPISFPTRSAVPALGTNPISLAAPGTGDDSFVLDMASTTVAI 228

Query: 608 GKVEIQVHKRGAV-ASW 655
           GKVE+   K   V  SW
Sbjct: 229 GKVELAARKENPVPLSW 245



 Score = 31.5 bits (68), Expect = 0.64
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 612 KLKYKYTKEEPLPAGWALGPDGKTTTD 692
           K++    KE P+P  W +G  GK TTD
Sbjct: 230 KVELAARKENPVPLSWGVGEGGKETTD 256


>AL033535-3|CAA22133.1|  400|Caenorhabditis elegans Hypothetical
           protein VF13D12L.3 protein.
          Length = 400

 Score =  221 bits (539), Expect = 5e-58
 Identities = 106/197 (53%), Positives = 137/197 (69%), Gaps = 1/197 (0%)
 Frame = +2

Query: 68  VLVEEARRFMEDSLTAVGAPVSEAKAQADLLIHADTVGHYSHGLNRLEFYINDILSKATD 247
           V  +E +RFM + +T VGA  S A   A +L+  D  GHYSHGLNRL+ Y+ DI      
Sbjct: 49  VAKDEMKRFMVECMTKVGATESHATQLALVLLEGDIRGHYSHGLNRLDMYVRDIEQNVCK 108

Query: 248 PCAKPVILKESAATALVDGCDALGATVGNFCMDVAIRKAQEAGVGWVAARRSNHYGMAGY 427
              +P+ILKE A TA VDG + LG  VGNFCMD+AI KA+ AG+GWV A+ SNHYG+AG+
Sbjct: 109 GDGEPIILKEKAGTAWVDGNNLLGPVVGNFCMDLAIEKAKNAGIGWVVAKGSNHYGIAGW 168

Query: 428 WALKAEKQGLIGLSFTNSSPILVPTRSKTSALGTNPIALAAPAKNGDNLVVDLATTAVAM 607
           +AL+A K+G++G+S TN+SPI  PTRS   ALGTNPI+LAAP    D+ V+D+A+T VA+
Sbjct: 169 YALRAMKKGMLGMSMTNTSPISFPTRSAVPALGTNPISLAAPGTGDDSFVLDMASTTVAI 228

Query: 608 GKVEIQVHKRGAV-ASW 655
           GKVE+   K   V  SW
Sbjct: 229 GKVELAARKENPVPLSW 245



 Score = 31.5 bits (68), Expect = 0.64
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 612 KLKYKYTKEEPLPAGWALGPDGKTTTD 692
           K++    KE P+P  W +G  GK TTD
Sbjct: 230 KVELAARKENPVPLSWGVGEGGKETTD 256


>Z96047-9|CAB09417.1|  372|Caenorhabditis elegans Hypothetical
           protein F36A2.3 protein.
          Length = 372

 Score =  188 bits (457), Expect = 5e-48
 Identities = 85/188 (45%), Positives = 127/188 (67%)
 Frame = +2

Query: 77  EEARRFMEDSLTAVGAPVSEAKAQADLLIHADTVGHYSHGLNRLEFYINDILSKATDPCA 256
           E+   F+ + L   G     A+  A+ L+ +D  GHYSHG+NRL  Y++D++ K+T    
Sbjct: 20  EKLDSFVLECLAKAGCTGDHAQQLAETLLCSDYRGHYSHGINRLHIYVHDLMMKSTAVTG 79

Query: 257 KPVILKESAATALVDGCDALGATVGNFCMDVAIRKAQEAGVGWVAARRSNHYGMAGYWAL 436
            P +LK   +TA VDG + LG  VGNFCM +A+ KA+E G+GWV  R SNH+G+AG++A 
Sbjct: 80  TPQVLKSKGSTAWVDGNNLLGPVVGNFCMQLAVEKAKEFGIGWVVCRNSNHFGIAGWYAD 139

Query: 437 KAEKQGLIGLSFTNSSPILVPTRSKTSALGTNPIALAAPAKNGDNLVVDLATTAVAMGKV 616
            A + GL+G++FTN+SP + PT S+  +LG+NPI +AAP   GD+  +D+A+T VA GK+
Sbjct: 140 FACRNGLVGMAFTNTSPCVFPTGSREKSLGSNPICMAAPGMEGDSFFLDMASTTVAYGKI 199

Query: 617 EIQVHKRG 640
           E+ V ++G
Sbjct: 200 EV-VDRKG 206


>Z81077-16|CAB03073.1|  372|Caenorhabditis elegans Hypothetical
           protein F36A2.3 protein.
          Length = 372

 Score =  188 bits (457), Expect = 5e-48
 Identities = 85/188 (45%), Positives = 127/188 (67%)
 Frame = +2

Query: 77  EEARRFMEDSLTAVGAPVSEAKAQADLLIHADTVGHYSHGLNRLEFYINDILSKATDPCA 256
           E+   F+ + L   G     A+  A+ L+ +D  GHYSHG+NRL  Y++D++ K+T    
Sbjct: 20  EKLDSFVLECLAKAGCTGDHAQQLAETLLCSDYRGHYSHGINRLHIYVHDLMMKSTAVTG 79

Query: 257 KPVILKESAATALVDGCDALGATVGNFCMDVAIRKAQEAGVGWVAARRSNHYGMAGYWAL 436
            P +LK   +TA VDG + LG  VGNFCM +A+ KA+E G+GWV  R SNH+G+AG++A 
Sbjct: 80  TPQVLKSKGSTAWVDGNNLLGPVVGNFCMQLAVEKAKEFGIGWVVCRNSNHFGIAGWYAD 139

Query: 437 KAEKQGLIGLSFTNSSPILVPTRSKTSALGTNPIALAAPAKNGDNLVVDLATTAVAMGKV 616
            A + GL+G++FTN+SP + PT S+  +LG+NPI +AAP   GD+  +D+A+T VA GK+
Sbjct: 140 FACRNGLVGMAFTNTSPCVFPTGSREKSLGSNPICMAAPGMEGDSFFLDMASTTVAYGKI 199

Query: 617 EIQVHKRG 640
           E+ V ++G
Sbjct: 200 EV-VDRKG 206


>U40945-5|AAS80344.1|  617|Caenorhabditis elegans Hypothetical
           protein F10D7.5a protein.
          Length = 617

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 21/78 (26%), Positives = 32/78 (41%)
 Frame = -2

Query: 525 PNALVLDLVGTNIGEEFVNDSPMRPCFSAFNAQYPAIPXXXXXLAATHPTPASCAFLIAT 346
           P  L+LD+ G ++G E ++ S  RP     NA  P I       A    +PA  A  +  
Sbjct: 174 PMWLILDIYGNSVGVEIIDASEFRP---RRNAPPPPIIAVPPRPAPARTSPAITAIALTP 230

Query: 345 SIQKFPTVAPKASQPSTR 292
           S     ++A +      R
Sbjct: 231 SSASESSMASRTDDSGKR 248


>Z81124-8|CAD56599.1|  426|Caenorhabditis elegans Hypothetical
           protein T21B4.14 protein.
          Length = 426

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -2

Query: 171 SAWIRRSACAFASDTGAPTAVRLSSMNLLASSTSTSGMTVLK 46
           S ++   +  F SD G PTA++L +M  ++S    S + + K
Sbjct: 170 SPYMASFSAGFCSDLGVPTAIQLFTMFTISSVVQVSIIMLFK 211


>Z81039-4|CAB02776.1|  361|Caenorhabditis elegans Hypothetical
           protein C25D7.5 protein.
          Length = 361

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 177 TVSAWIRRSACAFASDTGAPTAVRLSSMNL 88
           T S  +R  AC F  DTG P+  +  S NL
Sbjct: 118 TNSVLVRDGACVFVVDTGLPSQKKQISKNL 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,707,421
Number of Sequences: 27780
Number of extensions: 340157
Number of successful extensions: 1010
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)