Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30212
         (560 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IMJ8 Cluster: CG7920-PB, isoform B; n=1; Drosophila m...    38   0.16 
UniRef50_Q9VAC1 Cluster: CG7920-PA, isoform A; n=29; cellular or...    38   0.21 
UniRef50_Q9C0I3 Cluster: KIAA1680 protein; n=30; Euteleostomi|Re...    33   3.4  
UniRef50_Q24DC6 Cluster: Putative uncharacterized protein; n=9; ...    33   6.0  
UniRef50_UPI000155C1EA Cluster: PREDICTED: similar to glutamate-...    32   8.0  
UniRef50_A2DYX1 Cluster: Putative uncharacterized protein; n=1; ...    32   8.0  

>UniRef50_Q8IMJ8 Cluster: CG7920-PB, isoform B; n=1; Drosophila
           melanogaster|Rep: CG7920-PB, isoform B - Drosophila
           melanogaster (Fruit fly)
          Length = 104

 Score = 37.9 bits (84), Expect = 0.16
 Identities = 22/61 (36%), Positives = 36/61 (59%)
 Frame = +1

Query: 94  ITKIVPQVSSLHFGKLSSAFLSVKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSG 273
           + + V Q++SL   K ++   SV +  +YFTY + LS P+ R+P     +EA   C+KSG
Sbjct: 5   LARHVGQLNSLL--KTAATASSVSAHNNYFTYVRELSHPIAREPPIVKPEEAV-ACVKSG 61

Query: 274 K 276
           +
Sbjct: 62  E 62


>UniRef50_Q9VAC1 Cluster: CG7920-PA, isoform A; n=29; cellular
           organisms|Rep: CG7920-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 477

 Score = 37.5 bits (83), Expect = 0.21
 Identities = 22/60 (36%), Positives = 35/60 (58%)
 Frame = +1

Query: 94  ITKIVPQVSSLHFGKLSSAFLSVKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSG 273
           + + V Q++SL   K ++   SV +  +YFTY + LS P+ R+P     +EA   C+KSG
Sbjct: 5   LARHVGQLNSLL--KTAATASSVSAHNNYFTYVRELSHPIAREPPIVKPEEAV-ACVKSG 61


>UniRef50_Q9C0I3 Cluster: KIAA1680 protein; n=30; Euteleostomi|Rep:
           KIAA1680 protein - Homo sapiens (Human)
          Length = 902

 Score = 33.5 bits (73), Expect = 3.4
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +1

Query: 190 TQSLSQPLDRKPEYSTAKEAFEKCLKSGK 276
           T+SL++  +R+ E+ST K  F  CL SGK
Sbjct: 130 TRSLTEDFEREKEHSTNKNVFINCLSSGK 158


>UniRef50_Q24DC6 Cluster: Putative uncharacterized protein; n=9;
           Eukaryota|Rep: Putative uncharacterized protein -
           Tetrahymena thermophila SB210
          Length = 2228

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
 Frame = +1

Query: 76  FNRMSVITKIVPQVSS-LHFGKLSSAFLSVKSDRSYFTYTQSLSQPL--DRKPEYSTAKE 246
           +N+  +IT I+ + +  L +G++   F S+K ++ +FT TQ ++      R P Y + K 
Sbjct: 16  YNQDDIITLIMQRNNKILGYGEIQHLFESIKREKPHFTVTQYITAEFKPQRVPSYISQKS 75

Query: 247 AFEKCLKSG 273
           A      SG
Sbjct: 76  ALINKTVSG 84


>UniRef50_UPI000155C1EA Cluster: PREDICTED: similar to
           glutamate-rich 1; n=1; Ornithorhynchus anatinus|Rep:
           PREDICTED: similar to glutamate-rich 1 - Ornithorhynchus
           anatinus
          Length = 450

 Score = 32.3 bits (70), Expect = 8.0
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -3

Query: 219 PVQGLRQRLCIRKVTSIRFNTKESRT*LPEMKTRDLRNNFRNHRHPVKFS 70
           P+   R  LC+ K+T     T ESR    E   R +++ FR++R P   S
Sbjct: 59  PLGSFRSELCLNKITK----TSESRNVFSETPRRQMKHVFRDNRLPTSVS 104


>UniRef50_A2DYX1 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 3020

 Score = 32.3 bits (70), Expect = 8.0
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 162  NTKESRT*LPEMKTRDLRNNFRNHRHP 82
            N     T +P+ +TR++RNN RN RHP
Sbjct: 2515 NLPSKMTNIPQERTRNIRNNQRNVRHP 2541


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,329,899
Number of Sequences: 1657284
Number of extensions: 8545046
Number of successful extensions: 18778
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18775
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)