Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30212
         (560 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    26   0.25 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    24   1.0  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   7.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.6  

>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -1

Query: 308 NCFLIKCFWQNLPDLRHFSNASFAV-EYSGFLSRGCDNDCVY 186
           NC ++  + +N+PD  H S     V  + G+   G  ND +Y
Sbjct: 53  NCLVLNVYTRNIPDGIHTSLYPVLVWIHGGYFIFGSGNDDIY 94


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 194 NRCRSPWTGSLNIRPQRRRLR 256
           N C  P T   NIR  R+RLR
Sbjct: 271 NDCAKPLTQIRNIRGPRKRLR 291


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 413 FRLELHYNFNKFSI 454
           F L  +YNF KFS+
Sbjct: 21  FALVPYYNFEKFSL 34


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 398 QLLLTTINSFYSN 360
           QL+   IN+FYSN
Sbjct: 21  QLMSLIINTFYSN 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,655
Number of Sequences: 336
Number of extensions: 2504
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)