Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30211
         (784 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   6.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   6.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   6.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   6.4  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   6.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.4  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 329 LYQYPHLLLYFGFSCPFSL 273
           L  YPHL  +F FS P ++
Sbjct: 351 LNTYPHLFNFFEFSVPLAI 369


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 542  TKDVAQKNLFDKLNILGVN 598
            T DVA K  F KLN  G N
Sbjct: 1433 TLDVAFKKRFAKLNANGTN 1451


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 542  TKDVAQKNLFDKLNILGVN 598
            T DVA K  F KLN  G N
Sbjct: 1433 TLDVAFKKRFAKLNANGTN 1451


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 542  TKDVAQKNLFDKLNILGVN 598
            T DVA K  F KLN  G N
Sbjct: 1433 TLDVAFKKRFAKLNANGTN 1451


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 542  TKDVAQKNLFDKLNILGVN 598
            T DVA K  F KLN  G N
Sbjct: 1433 TLDVAFKKRFAKLNANGTN 1451


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 489 SSIVLFALIPNSTSRNFCKAIFFSMS 412
           + I +F  I +++ RNF  A FF ++
Sbjct: 290 NEIKMFVKIVDASCRNFTAARFFELN 315


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 428 FSFLCQYSNQLNRSHCRFFQQ 366
           F FLC+++ +  +++  FF Q
Sbjct: 144 FDFLCRHTVEYFQNYIHFFYQ 164


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 694 SLIDCIYQRVSNFIKFI*SKLNDFIF*LFQY 602
           S ID  Y +   +IK + S L DFI   F +
Sbjct: 41  SSIDRPYLKSYTYIKLVVSVLMDFIAYFFNF 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,533
Number of Sequences: 336
Number of extensions: 2298
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)