Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30209
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   2.9  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    22   3.8  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   5.1  
U61152-1|AAB41307.1|   45|Tribolium castaneum TATH2 protein.           21   6.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.9  

>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +3

Query: 222 LYHKAPSAKQPVTPIRT*SNRG 287
           L  KAP A QP T IR   N G
Sbjct: 42  LRFKAPQAPQPWTGIRDALNEG 63


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -2

Query: 405 AAGITTICVLCTFGASLTSLLIKVSLLSA 319
           A G+TT+  + T  +S  + L K+S + +
Sbjct: 101 ALGVTTVLTMTTLMSSTNAALPKISYVKS 129


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 569 HAELWGGSSNWLHGCHTA 622
           H    GGS+N + GC T+
Sbjct: 334 HCAAVGGSANIMSGCSTS 351


>U61152-1|AAB41307.1|   45|Tribolium castaneum TATH2 protein.
          Length = 45

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 80  KTMQRLRKVLPSLAVKHHKLLK 145
           +   RLR+V+PSL    HKL K
Sbjct: 15  EAFDRLRQVIPSLDA-DHKLSK 35


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 176 STIDHPPGAVERSTFSIPQGTFG 244
           ST   PPG++     S+P GT G
Sbjct: 210 STPYPPPGSLGSMGVSVPCGTSG 232


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,129
Number of Sequences: 336
Number of extensions: 3430
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)