Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30209
(655 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069164-1|AAL39309.1| 545|Drosophila melanogaster GH19483p pro... 112 3e-25
AE014298-2972|AAF45368.1| 545|Drosophila melanogaster CG9581-PA... 112 3e-25
BT001331-1|AAN71086.1| 559|Drosophila melanogaster AT18731p pro... 36 0.036
AY061085-1|AAL28633.1| 491|Drosophila melanogaster LD07362p pro... 36 0.036
AE014297-1514|AAF54806.2| 491|Drosophila melanogaster CG5663-PA... 36 0.036
AE014296-3710|AAN12200.1| 534|Drosophila melanogaster CG32454-P... 36 0.036
AY118979-1|AAM50839.1| 334|Drosophila melanogaster LP01850p pro... 31 1.0
AE014297-2488|AAF55527.1| 334|Drosophila melanogaster CG7142-PA... 31 1.0
AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p pro... 29 5.5
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio... 29 5.5
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein. 29 7.3
AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA... 29 7.3
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD... 29 7.3
AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB... 29 7.3
AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC... 29 7.3
>AY069164-1|AAL39309.1| 545|Drosophila melanogaster GH19483p
protein.
Length = 545
Score = 112 bits (270), Expect = 3e-25
Identities = 60/128 (46%), Positives = 79/128 (61%), Gaps = 8/128 (6%)
Frame = +2
Query: 230 QGTFGQATCHTHPHLIQQGHLTCGITQKEYAERRETLISRLVSEAP------NVHKT--H 385
+G GQ T +HPHLIQ L G+ E ERR L+ + + A N H + H
Sbjct: 64 KGNLGQPTSVSHPHLIQPDELVPGVELTEIKERRSQLMQNIRAYARSFGGEFNGHSSSCH 123
Query: 386 IVVIPAARKQFMSDKIPYVFRQNSDFFYLTGCLEPSAILVMIKPAHSDTFKSVLFVHEKD 565
++V+ AA K++MS KIPYVFRQNSDF+YLTGCLEP A+L ++ + +S LF+ KD
Sbjct: 124 MLVLGAASKKYMSGKIPYVFRQNSDFYYLTGCLEPDAVL-LLTIDEAQNVQSELFMRPKD 182
Query: 566 SHAELWGG 589
HAELW G
Sbjct: 183 PHAELWDG 190
>AE014298-2972|AAF45368.1| 545|Drosophila melanogaster CG9581-PA
protein.
Length = 545
Score = 112 bits (270), Expect = 3e-25
Identities = 60/128 (46%), Positives = 79/128 (61%), Gaps = 8/128 (6%)
Frame = +2
Query: 230 QGTFGQATCHTHPHLIQQGHLTCGITQKEYAERRETLISRLVSEAP------NVHKT--H 385
+G GQ T +HPHLIQ L G+ E ERR L+ + + A N H + H
Sbjct: 64 KGNLGQPTSVSHPHLIQPDELVPGVELTEIKERRSQLMQNIRAYARSFGGEFNGHSSSCH 123
Query: 386 IVVIPAARKQFMSDKIPYVFRQNSDFFYLTGCLEPSAILVMIKPAHSDTFKSVLFVHEKD 565
++V+ AA K++MS KIPYVFRQNSDF+YLTGCLEP A+L ++ + +S LF+ KD
Sbjct: 124 MLVLGAASKKYMSGKIPYVFRQNSDFYYLTGCLEPDAVL-LLTIDEAQNVQSELFMRPKD 182
Query: 566 SHAELWGG 589
HAELW G
Sbjct: 183 PHAELWDG 190
>BT001331-1|AAN71086.1| 559|Drosophila melanogaster AT18731p
protein.
Length = 559
Score = 36.3 bits (80), Expect = 0.036
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2
Query: 437 YVFRQNSDFFYLTGCLEPSAILVMIKPAHSDTFKSVLFVHEKDS 568
Y FRQ DF YL CL P A LV+ + +T + + DS
Sbjct: 161 YPFRQRPDFLYLCDCLRPGAALVLTRSRKRNTGALLFLSQDVDS 204
>AY061085-1|AAL28633.1| 491|Drosophila melanogaster LD07362p
protein.
Length = 491
Score = 36.3 bits (80), Expect = 0.036
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 386 IVVIPAARKQFM-SDKIPYVFRQNSDFFYLTGCLEPSAILVMIKPAHSDTFKSVLFVHEK 562
+V++ + Q + + + YVFRQ S F YL G EP ++ + KSVLFV
Sbjct: 44 LVLLEGGKDQSLYNTDVDYVFRQESYFQYLFGVKEPGCYGILTIDVKTGAQKSVLFVPRF 103
Query: 563 DSHAELWGG 589
W G
Sbjct: 104 PDEYGTWMG 112
>AE014297-1514|AAF54806.2| 491|Drosophila melanogaster CG5663-PA
protein.
Length = 491
Score = 36.3 bits (80), Expect = 0.036
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 386 IVVIPAARKQFM-SDKIPYVFRQNSDFFYLTGCLEPSAILVMIKPAHSDTFKSVLFVHEK 562
+V++ + Q + + + YVFRQ S F YL G EP ++ + KSVLFV
Sbjct: 44 LVLLEGGKDQSLYNTDVDYVFRQESYFQYLFGVKEPGCYGILTIDVKTGAQKSVLFVPRF 103
Query: 563 DSHAELWGG 589
W G
Sbjct: 104 PDEYGTWMG 112
>AE014296-3710|AAN12200.1| 534|Drosophila melanogaster CG32454-PA
protein.
Length = 534
Score = 36.3 bits (80), Expect = 0.036
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2
Query: 437 YVFRQNSDFFYLTGCLEPSAILVMIKPAHSDTFKSVLFVHEKDS 568
Y FRQ DF YL CL P A LV+ + +T + + DS
Sbjct: 136 YPFRQRPDFLYLCDCLRPGAALVLTRSRKRNTGALLFLSQDVDS 179
>AY118979-1|AAM50839.1| 334|Drosophila melanogaster LP01850p
protein.
Length = 334
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -1
Query: 472 KIEKVRILSKHIRYFIRHELFAGSWDYYNMCFVH 371
K E I +HI Y++RHEL+ G + Y++ ++
Sbjct: 149 KGEASNIQMRHIDYYVRHELYLGGVNPYDIALIY 182
>AE014297-2488|AAF55527.1| 334|Drosophila melanogaster CG7142-PA
protein.
Length = 334
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -1
Query: 472 KIEKVRILSKHIRYFIRHELFAGSWDYYNMCFVH 371
K E I +HI Y++RHEL+ G + Y++ ++
Sbjct: 149 KGEASNIQMRHIDYYVRHELYLGGVNPYDIALIY 182
>AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p
protein.
Length = 1153
Score = 29.1 bits (62), Expect = 5.5
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +2
Query: 131 HKLLKSHIRNQLRCLSTIDHPPGAVERSTFSIPQGTFGQATCHTHPHLIQQGHL 292
H L H +QL S+I PP S+ IP A H HPHL HL
Sbjct: 205 HGLHPGHQHSQLSAASSI--PP-----SSIGIPPTLSTMAPSHMHPHLHPHAHL 251
>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
corepressor Atro protein.
Length = 1985
Score = 29.1 bits (62), Expect = 5.5
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +2
Query: 131 HKLLKSHIRNQLRCLSTIDHPPGAVERSTFSIPQGTFGQATCHTHPHLIQQGHL 292
H L H +QL S+I PP S+ IP A H HPHL HL
Sbjct: 1037 HGLHPGHQHSQLSAASSI--PP-----SSIGIPPTLSTMAPSHMHPHLHPHAHL 1083
>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
Length = 1966
Score = 28.7 bits (61), Expect = 7.3
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +2
Query: 131 HKLLKSHIRNQLRCLSTIDHPPGAVERSTFSIPQGTFGQATCHTHPHLIQQGHL 292
H L H +QL S+I PP S+ IP A H HPHL HL
Sbjct: 1037 HGLHPGHQHSQLSVASSI--PP-----SSIGIPPTLSTMAPSHMHPHLHPHAHL 1083
>AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA,
isoform A protein.
Length = 1966
Score = 28.7 bits (61), Expect = 7.3
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +2
Query: 131 HKLLKSHIRNQLRCLSTIDHPPGAVERSTFSIPQGTFGQATCHTHPHLIQQGHL 292
H L H +QL S+I PP S+ IP A H HPHL HL
Sbjct: 1037 HGLHPGHQHSQLSVASSI--PP-----SSIGIPPTLSTMAPSHMHPHLHPHAHL 1083
>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
isoform D protein.
Length = 1985
Score = 28.7 bits (61), Expect = 7.3
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +2
Query: 131 HKLLKSHIRNQLRCLSTIDHPPGAVERSTFSIPQGTFGQATCHTHPHLIQQGHL 292
H L H +QL S+I PP S+ IP A H HPHL HL
Sbjct: 1037 HGLHPGHQHSQLSVASSI--PP-----SSIGIPPTLSTMAPSHMHPHLHPHAHL 1083
>AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB,
isoform B protein.
Length = 1985
Score = 28.7 bits (61), Expect = 7.3
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +2
Query: 131 HKLLKSHIRNQLRCLSTIDHPPGAVERSTFSIPQGTFGQATCHTHPHLIQQGHL 292
H L H +QL S+I PP S+ IP A H HPHL HL
Sbjct: 1037 HGLHPGHQHSQLSVASSI--PP-----SSIGIPPTLSTMAPSHMHPHLHPHAHL 1083
>AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC,
isoform C protein.
Length = 1988
Score = 28.7 bits (61), Expect = 7.3
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +2
Query: 131 HKLLKSHIRNQLRCLSTIDHPPGAVERSTFSIPQGTFGQATCHTHPHLIQQGHL 292
H L H +QL S+I PP S+ IP A H HPHL HL
Sbjct: 1037 HGLHPGHQHSQLSVASSI--PP-----SSIGIPPTLSTMAPSHMHPHLHPHAHL 1083
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,897,494
Number of Sequences: 53049
Number of extensions: 634507
Number of successful extensions: 1640
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1636
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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