Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30209
(655 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g09300.1 68414.m01041 metallopeptidase M24 family protein sim... 73 2e-13
At3g18850.2 68416.m02394 phospholipid/glycerol acyltransferase f... 30 1.2
At3g18850.1 68416.m02393 phospholipid/glycerol acyltransferase f... 30 1.2
At1g17680.2 68414.m02189 transcription factor-related low simila... 30 1.2
At1g17680.1 68414.m02188 transcription factor-related low simila... 30 1.2
At4g30520.1 68417.m04333 leucine-rich repeat family protein / pr... 29 2.0
At1g09290.1 68414.m09506 expressed protein This gene is continue... 29 2.7
At1g53700.1 68414.m06110 protein kinase, putative similar to cuc... 29 3.6
At3g27473.1 68416.m03434 DC1 domain-containing protein contains ... 27 8.2
At3g14370.1 68416.m01818 protein kinase family protein contains ... 27 8.2
At2g14120.2 68415.m01573 dynamin-like protein 2b (ADL2b) identic... 27 8.2
At2g14120.1 68415.m01572 dynamin-like protein 2b (ADL2b) identic... 27 8.2
>At1g09300.1 68414.m01041 metallopeptidase M24 family protein
similar to SP|P15034 Xaa-Pro aminopeptidase (EC
3.4.11.9) (X-Pro aminopeptidase) (Aminopeptidase P II)
(Aminoacylproline aminopeptidase) {Escherichia coli};
contains Pfam profiles PF00557: metallopeptidase family
M24, PF05195: Aminopeptidase P, N-terminal domain
Length = 493
Score = 72.5 bits (170), Expect = 2e-13
Identities = 34/89 (38%), Positives = 54/89 (60%)
Frame = +2
Query: 242 GQATCHTHPHLIQQGHLTCGITQKEYAERRETLISRLVSEAPNVHKTHIVVIPAARKQFM 421
GQ T +HPHL+ +G +T GI +EY RR+ L+ L + + +I +A + M
Sbjct: 32 GQPTPASHPHLMAEGEVTPGIRIEEYIGRRKKLVELLPENS-------LAIISSAPVKMM 84
Query: 422 SDKIPYVFRQNSDFFYLTGCLEPSAILVM 508
+D +PY FRQ++D+ YLTGC +P + V+
Sbjct: 85 TDVVPYTFRQDADYLYLTGCQQPGGVAVL 113
>At3g18850.2 68416.m02394 phospholipid/glycerol acyltransferase
family protein contains Pfam profile: PF01553
Acyltransferase
Length = 375
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2
Query: 420 MNCLRAAGITTICVLCTFGASLTSLLIKVSLLSAY 316
+NCL TTIC TF +S+ I VSL Y
Sbjct: 314 INCLAVIAFTTICTHLTFFSSMIWFRIYVSLACVY 348
>At3g18850.1 68416.m02393 phospholipid/glycerol acyltransferase
family protein contains Pfam profile: PF01553
Acyltransferase
Length = 375
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2
Query: 420 MNCLRAAGITTICVLCTFGASLTSLLIKVSLLSAY 316
+NCL TTIC TF +S+ I VSL Y
Sbjct: 314 INCLAVIAFTTICTHLTFFSSMIWFRIYVSLACVY 348
>At1g17680.2 68414.m02189 transcription factor-related low
similarity to SP|P33339 Transcription factor tau 131 kDa
subunit (TFIIIC 131 kDa subunit) Saccharomyces
cerevisiae, transcription factor IIIC102 short isoform
[Homo sapiens] GI:18481637
Length = 896
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +2
Query: 245 QATCHTHPHLIQQGHLTCGITQKEYAERRETLISRLVSEAPNVHKTH 385
QA CH H ++Q I +E LI+ L E N+ H
Sbjct: 369 QAICHVHLEEMEQAESVLSILPQEAVSEHPELITNLADELTNIGNFH 415
>At1g17680.1 68414.m02188 transcription factor-related low
similarity to SP|P33339 Transcription factor tau 131 kDa
subunit (TFIIIC 131 kDa subunit) Saccharomyces
cerevisiae, transcription factor IIIC102 short isoform
[Homo sapiens] GI:18481637
Length = 896
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +2
Query: 245 QATCHTHPHLIQQGHLTCGITQKEYAERRETLISRLVSEAPNVHKTH 385
QA CH H ++Q I +E LI+ L E N+ H
Sbjct: 369 QAICHVHLEEMEQAESVLSILPQEAVSEHPELITNLADELTNIGNFH 415
>At4g30520.1 68417.m04333 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 648
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = +2
Query: 452 NSDFFYLTGCLEPSAILVMIKPAHSDTFKSVLFVHEKDSHAELWGGSSNWLHGCHTAV 625
N D + L+ + + PAH V+ + E D AE W S N H H +
Sbjct: 538 NYDKIEVGEMLQVALLCTQYLPAHRPKMSEVVLMLEGDGLAERWAASHNHSHFYHANI 595
>At1g09290.1 68414.m09506 expressed protein This gene is continued
on the 5' end of BAC T12M14
Length = 348
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 269 HLIQQGHLTCGITQKEYAERRETLISRLVSEAPN 370
H I TCG+T+KE E L+ R V++ N
Sbjct: 197 HRIFPVQATCGLTEKELRETVSKLVQRFVNDKDN 230
>At1g53700.1 68414.m06110 protein kinase, putative similar to
cucumber protein kinase CsPK3 [Cucumis sativus]
gi|7416109|dbj|BAA93704
Length = 476
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 210 DLHSLYHKAPSAKQPVTPIR 269
DLHSL K P+ + P++P+R
Sbjct: 178 DLHSLLRKQPNNRLPISPVR 197
>At3g27473.1 68416.m03434 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 662
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1
Query: 244 PSNLSHPSALDPTGA-SYLRDHTKRICREE 330
PS+LSHP L GA Y D + IC +E
Sbjct: 174 PSHLSHPLKLITNGAPDYTEDRSCHICGKE 203
>At3g14370.1 68416.m01818 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 480
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 210 DLHSLYHKAPSAKQPVTPIR 269
DLHSL K P + P+ P+R
Sbjct: 172 DLHSLLRKQPGNRLPIQPVR 191
>At2g14120.2 68415.m01573 dynamin-like protein 2b (ADL2b) identical
to dynamin like protein 2b (ADL2b) [Arabidopsis
thaliana] GI:19032339
Length = 780
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 362 APNVHKTHIVVIPAARKQFMSDKIPYVFRQNSDFFYLTGCLEPSAILVMIKPAHSDTFKS 541
+PNV +V +P K + D+ P LT EPS +++ + PA++D S
Sbjct: 147 SPNVLDISLVDLPGITKVPVGDQ-PSDIEARIRTMILTYIKEPSCLILAVSPANTDLANS 205
>At2g14120.1 68415.m01572 dynamin-like protein 2b (ADL2b) identical
to dynamin like protein 2b (ADL2b) [Arabidopsis
thaliana] GI:19032339
Length = 780
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 362 APNVHKTHIVVIPAARKQFMSDKIPYVFRQNSDFFYLTGCLEPSAILVMIKPAHSDTFKS 541
+PNV +V +P K + D+ P LT EPS +++ + PA++D S
Sbjct: 147 SPNVLDISLVDLPGITKVPVGDQ-PSDIEARIRTMILTYIKEPSCLILAVSPANTDLANS 205
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,279,279
Number of Sequences: 28952
Number of extensions: 291950
Number of successful extensions: 762
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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