Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30208
(553 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 41 1e-04
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 36 0.004
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 31 0.15
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 30 0.20
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 29 0.34
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 29 0.46
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 29 0.46
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 29 0.60
SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces... 28 0.80
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 0.80
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 28 1.1
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 27 1.4
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 27 1.4
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 27 2.4
SPCC1393.13 |||DUF89 family protein|Schizosaccharomyces pombe|ch... 27 2.4
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 26 3.2
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 26 3.2
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 3.2
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 26 3.2
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 26 3.2
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 26 3.2
SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/ diacylg... 26 4.2
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 26 4.2
SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA syntheta... 25 5.6
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 25 5.6
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 25 5.6
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 25 5.6
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 25 7.4
SPAC1952.14c |mrpl25||mitochondrial ribosomal protein subunit L2... 25 7.4
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 25 7.4
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei... 25 7.4
SPAC1782.06c |||prohibitin Phb1|Schizosaccharomyces pombe|chr 1|... 25 7.4
SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone... 25 7.4
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 25 7.4
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.8
SPAC23C4.13 |bet1||SNARE Bet1|Schizosaccharomyces pombe|chr 1|||... 25 9.8
SPAC22F8.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 9.8
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 25 9.8
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 25 9.8
SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyce... 25 9.8
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 25 9.8
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 40.7 bits (91), Expect = 1e-04
Identities = 27/117 (23%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Frame = +3
Query: 204 DDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQM 383
+D + + + + +E+ + L K LEH++D TS++ L EK++ + +
Sbjct: 1410 EDVLKEKESLIISLEESLSNQRQKESSLLDAKNELEHMLDDTSRKNSSLMEKIESINSSL 1469
Query: 384 LSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRR----DVTIQQLQNKI 542
+ E A EKL +++L + ++ + L+E K + + TIQ+L ++I
Sbjct: 1470 DDKSFELASAVEKLG-ALQKLHSESLSLMENIKSQLQEAKEKIQVDESTIQELDHEI 1525
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 35.9 bits (79), Expect = 0.004
Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 8/175 (4%)
Frame = +3
Query: 36 KEKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFVSAPDD--- 206
KE+FE+ K ER +E K +++HL S A+G S + + + +
Sbjct: 1483 KEQFEQLKSEKERTEKELADSKNELEHL-QSEAVDADGKTEISNLEKEIHELRSDKEGLV 1541
Query: 207 DTMNKLTAQL-ALVEKQRRQVIVEN-EKLTWQKESLEHIVDATSKERDDLKEKLKRVELQ 380
+ L+A+L AL E Q +EN +++ + LE KE+ + + R EL
Sbjct: 1542 QQVQNLSAELAALREHSPTQGSLENADEIARLRSQLESTKQYYEKEK-ETEILAARSELV 1600
Query: 381 MLSRETEHALETE--KLSFTIKQLKDQLQAVSGD-TSVSLEEVKRRDVTIQQLQN 536
+T+ LE + + S IK+L++Q Q S + T +++++ ++ V + +N
Sbjct: 1601 AEKEKTKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVEEKLKEN 1655
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +3
Query: 9 DMMKTHMLHKEKFEETKELVERLRQ 83
D+ + +K+K+E+T + VERL++
Sbjct: 407 DLYSERLYYKQKYEQTCQEVERLQR 431
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 30.7 bits (66), Expect = 0.15
Identities = 29/112 (25%), Positives = 55/112 (49%)
Frame = +3
Query: 201 DDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQ 380
D D++N+L A+ L KQR V L+ K+ L ++ A ++ E +K +
Sbjct: 424 DSDSINRLYAEAQLELKQRDGV------LSSTKQQLSDLMTALGDAQERYVELVKNHRVN 477
Query: 381 MLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRDVTIQQLQN 536
S T + +K FTI+Q KD+ +++ + + L+++ D ++ L N
Sbjct: 478 --SNLTANNSLNDKPGFTIEQ-KDKNFSINNERNNFLQKLSTLDSSLAALVN 526
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 30.3 bits (65), Expect = 0.20
Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 2/157 (1%)
Frame = +3
Query: 42 KFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFVSAPDDDTMNK 221
+FEE ++ V L EN+K++ ++ P A S ++ +A + ++
Sbjct: 283 RFEEYRDKVATLELENEKIQTELNSWKSLITNELPTPEAVSNKLVFLQNTNANLGERVSS 342
Query: 222 LTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRETE 401
L +QL+ K Q + NEK HI +L+ KLK + Q + +
Sbjct: 343 LESQLS--NKPANQPLGANEK------DAAHIT--------ELETKLKELHEQNRRLQRQ 386
Query: 402 HALETEKLSFTIKQLK--DQLQAVSGDTSVSLEEVKR 506
+L T+++ + LK D +A+ + + +++++R
Sbjct: 387 KSLATQEIDLLRENLKSYDDEEAILSEKNTDMKKLER 423
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 29.5 bits (63), Expect = 0.34
Identities = 16/74 (21%), Positives = 43/74 (58%)
Frame = +3
Query: 282 KLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQ 461
++ W ++ HI+ ATS ++ + K + + + + ++TEHA + + +I++ K+ ++
Sbjct: 108 EVCWSQQG--HIL-ATSWKQISIYVKDEGLRTETIVKKTEHADSNHQPAVSIEESKEAVE 164
Query: 462 AVSGDTSVSLEEVK 503
+ S + +S + +K
Sbjct: 165 STSQSSEISFKLIK 178
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 29.1 bits (62), Expect = 0.46
Identities = 36/185 (19%), Positives = 75/185 (40%), Gaps = 7/185 (3%)
Frame = +3
Query: 6 EDMMKTHMLHKEKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVE 185
ED+ K H EK +E +EL + L ++ L+ ++ + ++ G ++E
Sbjct: 299 EDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLEKLTGDLGKIQGEIESLE 358
Query: 186 FVSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLK---- 353
+ +N++ + + E ++ E K I KER
Sbjct: 359 KLKVKKSTMINEIVHRYNINEINEEGIMTEVSKYASLVNKNYEISSGKLKERQVAVRARI 418
Query: 354 EKLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQ---AVSGDTSVSLEEVKRRDVTIQ 524
E +K E+ + +R +E EK T K+L+ + + V ++V++ D+ I+
Sbjct: 419 EGIKAHEMFLNNRVSEINSSLEKQLTTQKELRSRFEILFPVKLQREDFTKDVEKSDLWIK 478
Query: 525 QLQNK 539
L+ +
Sbjct: 479 SLRQE 483
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 29.1 bits (62), Expect = 0.46
Identities = 23/103 (22%), Positives = 48/103 (46%)
Frame = +3
Query: 243 VEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRETEHALETEK 422
+EK ++ + + + +LE ++ + +L EKL R++ ++L ++ + + ++
Sbjct: 970 LEKDYLNIMADYQHSSQHLSNLEKAINEKNLNIRELNEKLMRLDDELLLKQRSYDTKVQE 1029
Query: 423 LSFTIKQLKDQLQAVSGDTSVSLEEVKRRDVTIQQLQNKIAML 551
L LKDQ + + SL V + T +L K A L
Sbjct: 1030 LREENASLKDQCRTYESQLA-SL--VSKYSETESELNKKEAEL 1069
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 28.7 bits (61), Expect = 0.60
Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 6/137 (4%)
Frame = +3
Query: 36 KEKFEETKELVERLRQENKKLKFDIQH------LDDSRPRVAEGPPARSGPPSAVEFVSA 197
KE + L ++L++ NKK K +Q D S+ E G E
Sbjct: 37 KELQSKITNLRKQLKEGNKKQKRALQQKISQMEADLSQKHATERQKLDKGDEETNE---T 93
Query: 198 PDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVEL 377
+D +N L Q+ + + E + + E+ K R+ KE+L+R +
Sbjct: 94 QQEDLLNTLLQQM----EDTKITTAEKSSVQSSLNTKENTPQQPKKSRNRQKERLERRKA 149
Query: 378 QMLSRETEHALETEKLS 428
+M + LE+EK++
Sbjct: 150 EMKKMSEQAELESEKMA 166
>SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 28.3 bits (60), Expect = 0.80
Identities = 30/139 (21%), Positives = 54/139 (38%), Gaps = 1/139 (0%)
Frame = +3
Query: 120 DDSRPRVAEGPPARSGPPSAVEFVSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQK 299
D +R R + +RS P + + N + A+ E++R + E ++ + +
Sbjct: 9 DFNRSRPEKRHASRSSSPRSFRPSNQNARANYNLPRVRDAMKEEERSRETKEMQEREFLR 68
Query: 300 -ESLEHIVDATSKERDDLKEKLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGD 476
+ L + +R +KL M E E E + F + D L +
Sbjct: 69 LQQLRRAIIRLKNDRSKPIDKLLVSVYLMPGPEWEENGEKNSIDFGTVDMFDPLSVIQSY 128
Query: 477 TSVSLEEVKRRDVTIQQLQ 533
+ LEE+ R IQQL+
Sbjct: 129 KAEDLEEISRNIGDIQQLE 147
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 28.3 bits (60), Expect = 0.80
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = -1
Query: 322 STICSRDSFCQVSFSFSTITCRLCFSTSASWAVSLFMVSSSGADTNSTA 176
+TI S S + +FS+++ L STS+ + SL + SSS + T S+A
Sbjct: 558 TTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSA 606
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 27.9 bits (59), Expect = 1.1
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +3
Query: 177 AVEFVSAPDDDTMN--KLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATS-KERDD 347
A EF D ++ K T +LA ++ ++V+ N E + + +DA+S +R D
Sbjct: 248 AAEFKEKYKIDVLSNPKATFRLATAVERLKKVLSANANAPLNVEMIMNDIDASSFIKRSD 307
Query: 348 LKEKLKRVELQMLSRETEHALE 413
+E +K + L+ L+ E ALE
Sbjct: 308 FEELIKPL-LERLTPPIEKALE 328
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 27.5 bits (58), Expect = 1.4
Identities = 24/110 (21%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Frame = +3
Query: 213 MNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSR 392
+ +L + A E Q E+L QK E + KE++DL+ K++ +
Sbjct: 80 LKRLDEKQATPELQVSDSKEMEEQLELQKSQFEKRISILEKEKEDLQRKMEEL------- 132
Query: 393 ETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRDV-TIQQLQNK 539
T ++E +L+ ++ L Q ++ V +E K++++ +++L K
Sbjct: 133 -TVESMEVVRLTRQVETLSTQ-YSIQRSQWVREDEKKKKEIQDLKELYEK 180
Score = 27.1 bits (57), Expect = 1.8
Identities = 25/111 (22%), Positives = 49/111 (44%)
Frame = +3
Query: 213 MNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSR 392
M +LT + V + RQV + + + Q+ + KE DLKE ++ E +
Sbjct: 129 MEELTVESMEVVRLTRQVETLSTQYSIQRSQWVREDEKKKKEIQDLKELYEKSEHGAKNW 188
Query: 393 ETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRDVTIQQLQNKIA 545
E E ++S KQL D L+ + + + ++T+++ + +A
Sbjct: 189 ERERETFQNQVSQMSKQL-DSLEKLCERKDEEIRSSQAFNMTLREENDTLA 238
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 27.5 bits (58), Expect = 1.4
Identities = 16/83 (19%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +3
Query: 222 LTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDA-------TSKERDDLKEKLKRVELQ 380
+ ++ ++ QRRQV+ + K W ++ + D S+E + E+L ++ ++
Sbjct: 958 IETRIEVINGQRRQVLTQRMKRYWNQDLWHRLFDLLLNPTLHVSEENLPMTEELSKIRIE 1017
Query: 381 MLSRETEHALETEKLSFTIKQLK 449
M H+ L +K ++
Sbjct: 1018 MEEWLVNHSTGGSGLKGLLKSIE 1040
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 26.6 bits (56), Expect = 2.4
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +3
Query: 357 KLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRDVTIQQLQN 536
KLK VELQ+ +E E+ + K QL ++L+ + + + + +QL
Sbjct: 28 KLKEVELQLSLKEQEYESLSRKSEAAESQL-EELEEETKQLRLKADNEDIQKTEAEQLSR 86
Query: 537 KIAML 551
K+ +L
Sbjct: 87 KVELL 91
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +3
Query: 222 LTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRV 371
L +L +K R+ + + + E E V + +ERDD+++KL+ +
Sbjct: 91 LEEELETNDKLLRETTEKMRQTDVKAEHFERRVQSLERERDDMEQKLEEM 140
>SPCC1393.13 |||DUF89 family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 442
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 57 KELVERLRQENKKLKFDIQHLDDSRPRVAEGP 152
KE++ L Q LK+D+QH +P V +GP
Sbjct: 64 KEIISLLNQ----LKYDLQHNRPLKPLVGQGP 91
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 26.2 bits (55), Expect = 3.2
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +3
Query: 204 DDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQM 383
D + +T + LVEK + + + + W K L I+ ++ + D L EKLK +
Sbjct: 581 DGRITSVTLE-TLVEKYSE--LSKQQIVEWFKSKLYEILRDSASKIDSLTEKLKVANAEK 637
Query: 384 LSRETEHALETEKLS 428
+ E ALE L+
Sbjct: 638 NAALCEAALEKVPLA 652
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 6 EDMMK-THMLHKEKFEETKELVERLRQENK 92
ED+++ + K FE T VERLRQ+ K
Sbjct: 84 EDVLQHLQTIEKIPFESTSAFVERLRQDEK 113
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 270 VENEKLTWQKESLEHIVDATSKE-RDDLKEKLKRVELQMLSRETEHAL 410
+ ++KL +E L + +A+ + +DD +E ++R+ + +L HAL
Sbjct: 1103 ITSKKLPVNQEILRNAWEASQRSTKDDWQEWIRRLGVALLRESPSHAL 1150
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 26.2 bits (55), Expect = 3.2
Identities = 29/137 (21%), Positives = 58/137 (42%)
Frame = +3
Query: 12 MMKTHMLHKEKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFV 191
M + H + + + ++ L++EN LK I+ L + +A + S+++
Sbjct: 344 MQRVQNKHDLEKKRLQSAIQPLQEENNSLKQQIEQL---QRELASETVVKENLKSSLDQQ 400
Query: 192 SAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRV 371
SA + A + ++ V K+ LE I+ + + ERD L EKL +
Sbjct: 401 SANVQKLESTNRALESTIKTLEEDVYTMKNKII----ELEGILKSANVERDGLVEKL--I 454
Query: 372 ELQMLSRETEHALETEK 422
+ L R+ + ++ K
Sbjct: 455 AEETLRRKLHNTIQELK 471
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 26.2 bits (55), Expect = 3.2
Identities = 35/178 (19%), Positives = 72/178 (40%)
Frame = +3
Query: 9 DMMKTHMLHKEKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEF 188
+ +K+ +L +T+ ++ N +LK +I L + V+E R S+ +
Sbjct: 424 ESLKSRLLQSRTQMQTE--LDSYITSNSQLKDEITSLKQT---VSESEAERKRLFSSAQE 478
Query: 189 VSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKR 368
+T+NKLT+ + RQ+ + E L ++E L + ++ D ++
Sbjct: 479 KQLQMKETVNKLTSLQEQNNEFDRQLKEQEEDLQNKEEELTELRKLLREQTQDSQKLRLL 538
Query: 369 VELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRDVTIQQLQNKI 542
VE L R+ S + Q++++ + S E I +L ++I
Sbjct: 539 VEQLELERQDLKQAGENHYSNLSSDYETQIKSLESSLTNSQAECVSFQEKINELNSQI 596
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 26.2 bits (55), Expect = 3.2
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +3
Query: 210 TMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLS 389
T+N L Q + QV+ E+E ES + E D ++ L ++ LQ L
Sbjct: 581 TLNALQKQNKQKGEVLEQVVAESEAAKNMVESSNASIQQLKSEVADKEQTLAQLHLQ-LD 639
Query: 390 RETEHALETEKLSFTIKQLKDQLQ 461
T+ + ++ S + Q K L+
Sbjct: 640 EMTQRLVSLDEESKAVSQRKLDLE 663
>SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/
diacylglycerol ethanolaminesphotranferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 386
Score = 25.8 bits (54), Expect = 4.2
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 238 ASWAVSLFMVSSSGADTNSTADGGPDRAGGPSATLGLL 125
ASWA+ LF+ S A DG R G S+ LG L
Sbjct: 83 ASWAIGLFLYQSFDA-----IDGSQARRTGTSSPLGQL 115
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 25.8 bits (54), Expect = 4.2
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 204 DDTMN--KLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKER 341
DDT N K L + K+ R+ E +K+T + + + ++ A KE+
Sbjct: 437 DDTTNFKKRKKDLPYLTKKARKNYKETKKITQEMKEADAVITAQDKEK 484
>SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA synthetases
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 450
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 81 QENKKLKFDIQHLDDSRPRVAEGPPARSGP-PSAVEF 188
++NKK K D + D + + + PP + P PS ++F
Sbjct: 248 KQNKKEKKDKKDKKDKKEKAPKEPPKAATPVPSMIDF 284
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 417 EKLSFTIKQLKDQLQAVS-GDTSVSLEEVKRRDVTIQQLQNKI 542
E L I L++ + V+ GD ++ E++K++ IQQL K+
Sbjct: 606 EDLRSKITDLRETVAKVNAGDEGITSEDMKKKIDEIQQLSLKV 648
>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1024
Score = 25.4 bits (53), Expect = 5.6
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +3
Query: 288 TWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAV 467
TW S H++ T+ DL+ LK V L ++ E + E+L K+ + +++A
Sbjct: 906 TWSAISSIHVLTITNDRDMDLEHSLK-VLLDNVTVEKSPFAQLEELEVVRKKREAEIEAS 964
Query: 468 S 470
S
Sbjct: 965 S 965
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 25.4 bits (53), Expect = 5.6
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Frame = +3
Query: 42 KFEETKELVERLRQ--ENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFVSAPDDDTM 215
K+ E E V+ L E KF+ +++ P A S PP+A VS D +
Sbjct: 858 KYNELNEQVKTLEGYVETVLEKFNDLKIENKVPETAPDVVPSSYPPAAESNVSVSSDTST 917
Query: 216 NKLTAQLALVEKQRRQVIVEN 278
+ Q +Q Q I E+
Sbjct: 918 KDVEKQEPSSAEQPAQGIAES 938
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 25.0 bits (52), Expect = 7.4
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = +3
Query: 276 NEKLTWQKESLEHIVDATSKERD-------DLKEKLKRVELQMLSRETEHALETEKLSFT 434
N L ++ ++L + TS+ +D DL+ K+K + + S +TE A K++
Sbjct: 394 NSNLLFKLQTLNRNIKVTSQSKDSLTSIVGDLESKIKSLHESVSSLDTERADLLAKINEK 453
Query: 435 IKQLK 449
I+ L+
Sbjct: 454 IESLE 458
>SPAC1952.14c |mrpl25||mitochondrial ribosomal protein subunit
L25|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 279 EKLTWQKESLEHIVDATSKERDDLKEKLKRVEL 377
++++WQK+S HI+ + + E+ KR E+
Sbjct: 80 QQMSWQKDSTRHILKGLLNPKGKISER-KRDEI 111
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 90 CSLDGVSRPVPWSLRTSPCAAYGSSSCPPD 1
C + V SL T+PC YGS C D
Sbjct: 81 CGSTLTATEVSSSLCTTPCPGYGSLMCGGD 110
>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 25.0 bits (52), Expect = 7.4
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +3
Query: 270 VENEKLTWQKESL--EHIVDATSKERDDLKEKLKRVELQMLSRETEHALETEKL-SFTIK 440
V ++ + +QK + + I+DA ERD + L+ L+ E E L EKL S T++
Sbjct: 47 VSDKTIQFQKLQMTAKEIIDAF--ERDSTQRTLQIESLESKIGEQERDLNNEKLASETLR 104
Query: 441 QLKDQLQAVSGDTSV 485
+ L+ +G V
Sbjct: 105 EKTQLLEKENGALKV 119
>SPAC1782.06c |||prohibitin Phb1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 282
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +3
Query: 6 EDMMKTHMLHKEKFEETKELVERLRQENKKLKFDIQHLDDSR 131
ED+ THM ++F + E + +QE ++ +F ++ + R
Sbjct: 165 EDVSITHMTFGKEFTKAVERKQIAQQEAERARFLVEQSEQER 206
>SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone
regulator|Schizosaccharomyces pombe|chr 2|||Manual
Length = 195
Score = 25.0 bits (52), Expect = 7.4
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 351 KEKLKRVEL---QMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEV 500
K+KL EL Q+L + L +EKL F KQL ++Q + + +EV
Sbjct: 141 KQKLMISELLLQQLLKLDGVDVLGSEKLRFERKQLVSKIQKMLDHVDQTSQEV 193
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 2386
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 3 QEDMMKTHMLHKEKFEETKELVE 71
+ ++ TH++ EKFE TK+ E
Sbjct: 1638 KHQILSTHLVGYEKFENTKKTAE 1660
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 24.6 bits (51), Expect = 9.8
Identities = 36/181 (19%), Positives = 75/181 (41%), Gaps = 1/181 (0%)
Frame = +3
Query: 6 EDMMKT-HMLHKEKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAV 182
E +KT H L+++K ++ KEL ER+ + + DDS G + V
Sbjct: 150 EKQVKTLHDLNEQKDKKIKELKERINDLTYDYETLKANADDS-----------EGKQTLV 198
Query: 183 EFVSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKL 362
A ++ +KL + + K+ ++ + + L +++ LE+ + + L E+
Sbjct: 199 SKREAALEEFQSKLLIRENEINKRELKMNGKEDDLKKREKDLENRLLKVEEHEKSLNERA 258
Query: 363 KRVELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRDVTIQQLQNKI 542
++ + E+ IKQ K+Q S + S + + + I L+ K+
Sbjct: 259 TKLSEANENFNNRFKEFEEREKSAIKQNKEQ----SSEGSKTANQTHEQKELINSLEKKV 314
Query: 543 A 545
+
Sbjct: 315 S 315
>SPAC23C4.13 |bet1||SNARE Bet1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 117
Score = 24.6 bits (51), Expect = 9.8
Identities = 16/74 (21%), Positives = 32/74 (43%)
Frame = +3
Query: 150 PPARSGPPSAVEFVSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDAT 329
P S P ++ + +D+ ++KLT ++ +++ + E T ES+ D+T
Sbjct: 17 PLYESQSPQHLDSLENENDERISKLTGKVKSLKELTMNIGTEITSSTKLMESMNDSFDST 76
Query: 330 SKERDDLKEKLKRV 371
+LK V
Sbjct: 77 KSLLSGTMTRLKNV 90
>SPAC22F8.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 133
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -1
Query: 286 SFSFSTITCRLCF 248
SFSFS++ C LCF
Sbjct: 20 SFSFSSLLCILCF 32
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 333 KERDDLKEKLKRVELQMLSRETEHALETEK 422
+E +++K++ KR QML E ALE EK
Sbjct: 172 RELENIKQERKRE--QMLQEEKNRALEQEK 199
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 38 GEVRRDQGTGRETPSREQEVK 100
G+VRRD G+ + TPS +Q+ K
Sbjct: 125 GKVRRDFGSCQITPSAKQQRK 145
>SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 218
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +3
Query: 246 EKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQM 383
E +Q +++ +K Q + E +D+T K+ D+L + + +VE ++
Sbjct: 130 EIMEKQFVLQKKKNELQSSTEE--IDSTEKDFDELHKVILKVEREL 173
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/69 (20%), Positives = 33/69 (47%)
Frame = +3
Query: 243 VEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRETEHALETEK 422
+EK + +V N+K+ W E +D+ ++++ K E +L + + + +K
Sbjct: 619 IEKSHKIRLVRNDKIIWSGE-----IDSLKHLKEEVTSIKKGRECGILLKNFDEIVTGDK 673
Query: 423 LSFTIKQLK 449
L +++ K
Sbjct: 674 LQTFVEEYK 682
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,572,907
Number of Sequences: 5004
Number of extensions: 25199
Number of successful extensions: 181
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 229961028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -