Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30208
(553 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 36 0.001
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 29 0.077
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 27 0.41
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 26 0.72
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 25 2.2
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr... 25 2.2
AY659931-1|AAT51799.1| 167|Anopheles gambiae lysozyme i-1 protein. 23 6.7
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 23 6.7
AY146723-1|AAO12083.1| 155|Anopheles gambiae odorant-binding pr... 23 8.8
AY146721-1|AAO12081.1| 144|Anopheles gambiae odorant-binding pr... 23 8.8
AF437884-1|AAL84179.1| 144|Anopheles gambiae odorant binding pr... 23 8.8
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 35.5 bits (78), Expect = 0.001
Identities = 38/182 (20%), Positives = 78/182 (42%), Gaps = 17/182 (9%)
Frame = +3
Query: 48 EETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFVSAPDDDTMNKLT 227
E K+ +E++ E K+L ++Q + + E A+ +E ++ + KLT
Sbjct: 397 ERRKKTLEQIAAEEKRL-LELQDVPKKNKKEIEESEAK------IESLTRQKTEVEAKLT 449
Query: 228 AQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSK------------ERDDLKEKLKRV 371
A LA ++ + + ++ E EKL + L+ VD + + D++ E+ K
Sbjct: 450 ANLATLKDETKVLLEEKEKLQTELIELKRAVDESKSALSIAESELKICQHDEVTERRKLE 509
Query: 372 ELQMLSRETEHALETEK-----LSFTIKQLKDQLQAVSGDTSVSLEEVKRRDVTIQQLQN 536
L+ ETE LE ++ L + + +L+ + E + T++ +Q
Sbjct: 510 SLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKLQENANEERELTQTLRAVQG 569
Query: 537 KI 542
K+
Sbjct: 570 KL 571
Score = 26.6 bits (56), Expect = 0.54
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 4/165 (2%)
Frame = +3
Query: 60 ELVERLRQENKKLKFDIQ----HLDDSRPRVAEGPPARSGPPSAVEFVSAPDDDTMNKLT 227
E VE L+QEN + Q +L + + ++ E R + A D+T + L
Sbjct: 292 EAVEYLKQENTLTRTRNQQIQKYLCEQKRKIGEFEVERDQAAG----ILAKHDETYDALK 347
Query: 228 AQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRETEHA 407
A+ EK ++ I + ++L KES E +T K D K +V+ M +
Sbjct: 348 AERVEKEKLVKEEIKQYDELVSAKESKE----STLKNSLD---KFAKVQANMRATNERRK 400
Query: 408 LETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRDVTIQQLQNKI 542
E+++ K+L +LQ V +EE + + ++ + + ++
Sbjct: 401 KTLEQIAAEEKRLL-ELQDVPKKNKKEIEESEAKIESLTRQKTEV 444
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 29.5 bits (63), Expect = 0.077
Identities = 13/81 (16%), Positives = 45/81 (55%)
Frame = +3
Query: 297 KESLEHIVDATSKERDDLKEKLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGD 476
++SLE A +++R ++++ +++EL M + H +++ + + + ++QA++ +
Sbjct: 856 EDSLETFKQAEARQRQEIEKDKEKIEL-MKQEKAAHKTLVDQMEEEMAKARREVQALAKE 914
Query: 477 TSVSLEEVKRRDVTIQQLQNK 539
+ + + + I+ +++K
Sbjct: 915 LAAIHQSIANIESRIESMKSK 935
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 27.1 bits (57), Expect = 0.41
Identities = 13/54 (24%), Positives = 33/54 (61%)
Frame = +3
Query: 84 ENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFVSAPDDDTMNKLTAQLALV 245
++++L+ + + S+P +G P R ++ + V+ PD++ +N+ + Q+A+V
Sbjct: 1134 KSEELQLTVPYYAQSQP---QGSPLRLYFFASKQIVTFPDEERLNRASNQIAIV 1184
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 26.2 bits (55), Expect = 0.72
Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 5/145 (3%)
Frame = +3
Query: 126 SRPRVAEGPPARSGPPSAVEFVSAPDDDTMNKLTAQLALVEKQRRQVIVENEKL--TWQK 299
+RP + PP S PP+ + +A+ A V+ R + KL +
Sbjct: 9 NRPPGSHRPPGLSNPPTCTSAKMMASSGMSTRASARSASVD--CRSSLASGSKLFAPEPR 66
Query: 300 ESLEHI-VDATSKERDDLKEKLKRVELQMLSRETEHALETEKLSFTIK--QLKDQLQAVS 470
+L + V +K K EL++L + T LE + L + +L +Q+ +
Sbjct: 67 VALPRVSVTGINKPTVATKAASTTPELELL-KATIQQLEEQNLEMKEQNFRLAEQITRMC 125
Query: 471 GDTSVSLEEVKRRDVTIQQLQNKIA 545
EE KRR+ ++ K+A
Sbjct: 126 QLLQEEKEEAKRREEKLKAQMEKLA 150
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 24.6 bits (51), Expect = 2.2
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = -1
Query: 301 SFCQVSFSFSTITCRLCFSTSASWAVSLFMV 209
SFC++ + + CF SW +MV
Sbjct: 146 SFCEIDVEYFPFDEQTCFMKFGSWTYDGYMV 176
>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
protein.
Length = 1253
Score = 24.6 bits (51), Expect = 2.2
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Frame = +3
Query: 105 DIQHLDDSRPRVAEGPPARSGPPSAVEFVSAPDDDTMNKLTAQLALVEKQRRQVIVEN-- 278
DI LD RP GP + S A + +D++ + Q+ + V ++N
Sbjct: 821 DIGSLDMHRPEGNRGPSSPSSTSGAASPIQTVKNDSLEEPEKQINYLPDWLYDVDLKNGD 880
Query: 279 -EKLTWQKES--LEHI------VDATSKERDDLKEKLK 365
E ++ +E +E I +D + K+++++K +LK
Sbjct: 881 TETISASEEQFWIELIEKYLKPLDLSEKQKEEMKSQLK 918
>AY659931-1|AAT51799.1| 167|Anopheles gambiae lysozyme i-1 protein.
Length = 167
Score = 23.0 bits (47), Expect = 6.7
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 322 STICSRDSFCQVSFSFSTITCRLCFSTSASWA 227
S IC S C S S C + T A WA
Sbjct: 43 SCICEASSGCDASLRCSGDVCGMFAITWAYWA 74
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 23.0 bits (47), Expect = 6.7
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +3
Query: 291 WQKESLEHIVDATS 332
W +E +H++DAT+
Sbjct: 41 WMEEQAQHLIDATT 54
>AY146723-1|AAO12083.1| 155|Anopheles gambiae odorant-binding
protein AgamOBP17 protein.
Length = 155
Score = 22.6 bits (46), Expect = 8.8
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = +3
Query: 117 LDDSRPRV-AEGPPARSGPPSAVEFVSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTW 293
L D+ PR AE PP P +E + D + K ++K + I E+EKL
Sbjct: 18 LGDTTPRRDAEYPP-----PELLEALKPLHDICLGKTGVTEEAIKKFSDEEIHEDEKLKC 72
Query: 294 QKESLEHIVDATSKERDDLKEKL 362
L H D EKL
Sbjct: 73 YMNCLFHEAKVVDDNGDVHLEKL 95
>AY146721-1|AAO12081.1| 144|Anopheles gambiae odorant-binding
protein AgamOBP1 protein.
Length = 144
Score = 22.6 bits (46), Expect = 8.8
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = +3
Query: 117 LDDSRPRV-AEGPPARSGPPSAVEFVSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTW 293
L D+ PR AE PP P +E + D + K ++K + I E+EKL
Sbjct: 18 LGDTTPRRDAEYPP-----PELLEALKPLHDICLGKTGVTEEAIKKFSDEEIHEDEKLKC 72
Query: 294 QKESLEHIVDATSKERDDLKEKL 362
L H D EKL
Sbjct: 73 YMNCLFHEAKVVDDNGDVHLEKL 95
>AF437884-1|AAL84179.1| 144|Anopheles gambiae odorant binding
protein protein.
Length = 144
Score = 22.6 bits (46), Expect = 8.8
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = +3
Query: 117 LDDSRPRV-AEGPPARSGPPSAVEFVSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTW 293
L D+ PR AE PP P +E + D + K ++K + I E+EKL
Sbjct: 18 LGDTTPRRDAEYPP-----PELLEALKPLHDICLGKTGVTEEAIKKFSDEEIHEDEKLKC 72
Query: 294 QKESLEHIVDATSKERDDLKEKL 362
L H D EKL
Sbjct: 73 YMNCLFHEAKVVDDNGDVHLEKL 95
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 405,796
Number of Sequences: 2352
Number of extensions: 6284
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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