Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30208
(553 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g61570.1 68416.m06896 intracellular protein transport protein... 43 2e-04
At2g46180.1 68415.m05742 intracellular protein transport protein... 42 4e-04
At2g34730.1 68415.m04265 myosin heavy chain-related low similari... 40 8e-04
At4g38070.1 68417.m05377 bHLH family protein contains Pfam profi... 40 0.001
At1g68790.1 68414.m07863 expressed protein 39 0.002
At5g27330.1 68418.m03263 expressed protein 39 0.003
At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyo... 38 0.004
At1g17140.2 68414.m02089 tropomyosin-related similar to Tropomyo... 37 0.008
At1g17140.1 68414.m02088 tropomyosin-related similar to Tropomyo... 37 0.008
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 36 0.014
At5g61550.1 68418.m07724 protein kinase family protein contains ... 36 0.018
At5g13020.1 68418.m01492 emsy N terminus domain-containing prote... 35 0.042
At1g06530.1 68414.m00692 myosin heavy chain-related similar to m... 35 0.042
At5g67240.1 68418.m08475 exonuclease family protein contains exo... 34 0.073
At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 33 0.13
At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)... 33 0.13
At5g61560.1 68418.m07725 protein kinase family protein contains ... 33 0.17
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 33 0.17
At5g12150.1 68418.m01426 pleckstrin homology (PH) domain-contain... 32 0.22
At2g21380.1 68415.m02544 kinesin motor protein-related 32 0.22
At3g50240.1 68416.m05494 kinesin motor protein-related KINESIN-L... 32 0.29
At1g77580.2 68414.m09032 myosin heavy chain-related low similari... 32 0.29
At1g77580.1 68414.m09033 myosin heavy chain-related low similari... 32 0.29
At5g67270.1 68418.m08480 microtubule-associated EB1 family prote... 31 0.39
At4g40020.1 68417.m05666 hypothetical protein 31 0.39
At4g33390.1 68417.m04746 hypothetical protein contains Pfam prof... 31 0.39
At4g14480.1 68417.m02233 protein kinase family protein contains ... 31 0.39
At3g11820.2 68416.m01448 syntaxin 121 (SYP121) / syntaxin-relate... 31 0.39
At3g11820.1 68416.m01449 syntaxin 121 (SYP121) / syntaxin-relate... 31 0.39
At2g36610.1 68415.m04488 homeobox-leucine zipper family protein ... 31 0.39
At1g52430.1 68414.m05919 ubiquitin carboxyl-terminal hydrolase-r... 31 0.39
At1g24560.1 68414.m03090 expressed protein 31 0.39
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 31 0.51
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 31 0.51
At2g31370.2 68415.m03834 bZIP transcription factor (POSF21) iden... 31 0.51
At2g31370.1 68415.m03833 bZIP transcription factor (POSF21) iden... 31 0.51
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 31 0.51
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 31 0.51
At4g04400.1 68417.m00634 hypothetical protein contains Pfam prof... 31 0.68
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 31 0.68
At5g60930.1 68418.m07643 chromosome-associated kinesin, putative... 30 0.89
At5g49930.1 68418.m06182 zinc knuckle (CCHC-type) family protein... 30 0.89
At3g55060.1 68416.m06115 expressed protein contains weak similar... 30 0.89
At1g06070.1 68414.m00636 bZIP transcription factor, putative (bZ... 30 0.89
At4g27595.1 68417.m03964 protein transport protein-related low s... 30 1.2
At2g22795.1 68415.m02704 expressed protein 30 1.2
At5g19390.2 68418.m02311 pleckstrin homology (PH) domain-contain... 29 1.6
At5g19390.1 68418.m02310 pleckstrin homology (PH) domain-contain... 29 1.6
At4g26020.1 68417.m03747 expressed protein weak similarity to ca... 29 1.6
At3g22440.1 68416.m02836 hydroxyproline-rich glycoprotein family... 29 1.6
At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profi... 29 1.6
At3g07190.1 68416.m00857 expressed protein 29 1.6
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 29 1.6
At1g52080.1 68414.m05875 actin binding protein family contains P... 29 1.6
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 29 1.6
At1g03080.1 68414.m00282 kinase interacting family protein simil... 29 1.6
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 29 2.1
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 29 2.1
At5g52410.2 68418.m06502 expressed protein 29 2.1
At5g52410.1 68418.m06503 expressed protein 29 2.1
At3g47770.1 68416.m05204 ABC transporter family protein AbcA, Di... 29 2.1
At3g04960.1 68416.m00538 expressed protein low similarity to SP|... 29 2.1
At5g53020.1 68418.m06585 expressed protein 29 2.7
At1g69810.1 68414.m08032 WRKY family transcription factor 29 2.7
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 29 2.7
At1g04160.1 68414.m00406 myosin family protein contains Pfam pro... 29 2.7
At5g60030.1 68418.m07527 expressed protein 28 3.6
At5g55820.1 68418.m06956 expressed protein 28 3.6
At5g13560.1 68418.m01566 expressed protein weak similarity to SP... 28 3.6
At4g27980.1 68417.m04014 expressed protein 28 3.6
At4g18820.1 68417.m02778 expressed protein 28 3.6
At1g09470.1 68414.m01059 expressed protein ; expression supporte... 28 3.6
At5g61460.1 68418.m07712 structural maintenance of chromosomes (... 28 4.8
At5g61150.2 68418.m07672 leo1-like family protein weak similarit... 28 4.8
At5g61150.1 68418.m07671 leo1-like family protein weak similarit... 28 4.8
At5g45720.1 68418.m05621 hypothetical protein 28 4.8
At5g27220.1 68418.m03247 protein transport protein-related low s... 28 4.8
At4g35720.1 68417.m05069 expressed protein contains Pfam profile... 28 4.8
At4g13885.1 68417.m02151 3'-5' exonuclease-related contains weak... 28 4.8
At4g01780.1 68417.m00233 XH/XS domain-containing protein contain... 28 4.8
At3g45380.1 68416.m04899 hypothetical protein contains Pfam prof... 28 4.8
At1g67130.1 68414.m07637 F-box family protein contains Pfam PF00... 28 4.8
At4g31570.1 68417.m04483 expressed protein 27 6.3
At4g18950.1 68417.m02792 ankyrin protein kinase, putative simila... 27 6.3
At3g21150.1 68416.m02672 zinc finger (B-box type) family protein... 27 6.3
At2g27170.1 68415.m06029 structural maintenance of chromosomes (... 27 6.3
At2g20290.1 68415.m02370 myosin, putative similar to myosin (GI:... 27 6.3
At1g58100.1 68414.m06585 TCP family transcription factor, putati... 27 6.3
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 27 8.3
At5g66660.1 68418.m08403 hypothetical protein 27 8.3
At5g26350.1 68418.m03150 hypothetical protein 27 8.3
At5g25450.1 68418.m03023 ubiquinol-cytochrome C reductase comple... 27 8.3
At3g45850.1 68416.m04962 kinesin motor protein-related kinesin-r... 27 8.3
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 27 8.3
At3g02930.1 68416.m00288 expressed protein ; expression support... 27 8.3
At2g32230.1 68415.m03938 pentatricopeptide (PPR) repeat-containi... 27 8.3
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 27 8.3
At1g18370.1 68414.m02295 kinesin motor family protein (NACK1) si... 27 8.3
>At3g61570.1 68416.m06896 intracellular protein transport protein
USO1-related contains weak similarity to intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]
Length = 712
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/81 (25%), Positives = 46/81 (56%)
Frame = +3
Query: 207 DTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQML 386
D LT + ++K++ + E++ + LE + T +ERD +++LKR++ +L
Sbjct: 318 DATESLTRHPSTLDKEKPESFPGKEEMEQSLQRLEMDLKETQRERDKARQELKRLKQHLL 377
Query: 387 SRETEHALETEKLSFTIKQLK 449
+ETE + + ++ S I++L+
Sbjct: 378 EKETEESEKMDEDSRLIEELR 398
Score = 40.3 bits (90), Expect = 8e-04
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 14/192 (7%)
Frame = +3
Query: 15 MKTHMLHKE-----KFEETKELVERLRQENKKLKFDIQHLDDS-RPRVAEGPPARSGPPS 176
+K H+L KE K +E L+E LRQ N+ + I HL+ S + ++ R +
Sbjct: 372 LKQHLLEKETEESEKMDEDSRLIEELRQTNEYQRSQISHLEKSLKQAISNQEDNRLSNDN 431
Query: 177 AVEFVSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTW---QKESLEHIVDATSKERDD 347
+ + DD KLT L +E + +++ L + E+ EH + +D+
Sbjct: 432 QIRKLKDTVDDLNQKLTNCLRTIESKNVELLNLQTALGQYYAEIEAKEHFERELAMAKDE 491
Query: 348 LKE---KLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRDVT 518
L + +LK + ++ S E T KL K + V T V + K R V
Sbjct: 492 LMKLSARLKDSDERLESSNKEKEDVTSKLLHAEKVAAEWKNRV---TKVEEDNAKVRRVL 548
Query: 519 IQQLQ--NKIAM 548
Q + N+++M
Sbjct: 549 EQSMTRLNRMSM 560
>At2g46180.1 68415.m05742 intracellular protein transport protein
USO1-related similar to Intracellular protein transport
protein USO1 (Swiss-Prot:P25386) [Saccharomyces
cerevisiae]
Length = 725
Score = 41.5 bits (93), Expect = 4e-04
Identities = 33/153 (21%), Positives = 71/153 (46%)
Frame = +3
Query: 69 ERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFVSAPDDDTMNKLTAQLALVE 248
E L++ NK L+ + L R + A S F + +D L+ L+ ++
Sbjct: 282 ENLKEVNKALEKENNELKLKRSELEAALEASQKSTSRKLFPKSTED-----LSRHLSSLD 336
Query: 249 KQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRETEHALETEKLS 428
+++ E + + LE ++ +E+D +++LKR++ +L +ETE + + ++ S
Sbjct: 337 EEKAGTFPGKEDMEKSLQRLEKELEEARREKDKARQELKRLKQHLLEKETEESEKMDEDS 396
Query: 429 FTIKQLKDQLQAVSGDTSVSLEEVKRRDVTIQQ 527
I +L+ Q + LE+ R+ + Q+
Sbjct: 397 RLIDELR-QTNEYQRSQILGLEKALRQTMANQE 428
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 3 QEDMMKTHMLHKEKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAE 146
+EDM K+ +++ EE + ++ RQE K+LK QHL + +E
Sbjct: 346 KEDMEKSLQRLEKELEEARREKDKARQELKRLK---QHLLEKETEESE 390
>At2g34730.1 68415.m04265 myosin heavy chain-related low similarity to
SP|P14105 Myosin heavy chain, nonmuscle (Cellular myosin
heavy chain) {Gallus gallus}
Length = 825
Score = 40.3 bits (90), Expect = 8e-04
Identities = 40/184 (21%), Positives = 82/184 (44%), Gaps = 5/184 (2%)
Frame = +3
Query: 3 QEDMMKTHMLHKEKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAV 182
+E++ + L KEK + L E KK++ Q ++D + +V A+
Sbjct: 577 KEEIHRLGCLVKEKENLVQTAENNLATERKKIEVVSQQINDLQSQVERQETEIQDKIEAL 636
Query: 183 EFVSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKL 362
VSA + + + +++ + ++ +++ +K E + T E++ LK++L
Sbjct: 637 SVVSARELEKVKGYETKISSLREELELARESLKEMKDEKRKTEEKLSETKAEKETLKKQL 696
Query: 363 KRVEL----QMLSR-ETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRDVTIQQ 527
++L Q++ + L EK T +LK+ +Q+ D S + EVK + T +Q
Sbjct: 697 VSLDLVVPPQLIKGFDILEGLIAEKTQKTNSRLKN-MQSQLSDLSHQINEVKGKASTYKQ 755
Query: 528 LQNK 539
K
Sbjct: 756 RLEK 759
>At4g38070.1 68417.m05377 bHLH family protein contains Pfam profile:
PF00010 helix-loop-helix DNA-binding domain; PMID:
12679534; putative bHLH131 transcription factor
Length = 1513
Score = 39.5 bits (88), Expect = 0.001
Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 3/167 (1%)
Frame = +3
Query: 33 HKEKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFVSAPDDDT 212
++E EE + ++ L + ++K D++ ++ EG +
Sbjct: 103 YREFEEEKRNMMSGLDEASEK-NIDLEQKNNVYRAEIEGLKGLLAVAETKRIEAEKTVKG 161
Query: 213 MNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSR 392
M ++ + +V K + EKL W+KE +H+ +A K ++ K+ K E +
Sbjct: 162 MKEMRGRDDVVVKMEEEKSQVEEKLKWKKEQFKHLEEAYEKLKNLFKDSKKEWEEEKSKL 221
Query: 393 ETE-HALETEKLSFT--IKQLKDQLQAVSGDTSVSLEEVKRRDVTIQ 524
E ++L+T+ S T + L+ +LQ +G +++ EE +R+ + IQ
Sbjct: 222 LDEIYSLQTKLDSVTRISEDLQKKLQMCNG--ALTQEETRRKHLEIQ 266
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 39.1 bits (87), Expect = 0.002
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
Frame = +3
Query: 18 KTHMLHKEKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFVSA 197
K + KE E + L+ER + E KL D + + DSR R E +E +
Sbjct: 326 KVDIKEKELHEFEENLIEREQMEIGKLLDDQKAVLDSRRREFE---------MELEQMRR 376
Query: 198 PDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRV-- 371
D+ +L + A +E+ + ++ + EKL ++ +LE + K+ DL +LK V
Sbjct: 377 SLDE---ELEGKKAEIEQLQVEISHKEEKLAKREAALEKKEEGVKKKEKDLDARLKTVKE 433
Query: 372 -ELQMLSRETEHALETEKL---SFTIKQLKDQLQAVSGDTSVSLEEVKRRDVTIQ 524
E + + E + +E E+L +++LKD+++ + +T+ ++ +++
Sbjct: 434 KEKALKAEEKKLHMENERLLEDKECLRKLKDEIEEIGTETTKQESRIREEHESLR 488
>At5g27330.1 68418.m03263 expressed protein
Length = 628
Score = 38.7 bits (86), Expect = 0.003
Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 13/177 (7%)
Frame = +3
Query: 36 KEKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFVSAPDDDTM 215
++K + E+VE L +E + L+ + L+ S V E AR+ + + + +
Sbjct: 283 EKKLGDMNEIVESLTKEREGLRGQVVGLEKSLDEVTEEAKARAEQINELVKEKTVKESEL 342
Query: 216 NKLTAQLALVEKQRRQVIVE---NEKLTWQ-----KESLEHIVDATSK--ERDDLKEKLK 365
L + ++K+ +V+ EKL Q E ++ +V+ ++ E L + K
Sbjct: 343 EGLMVENNSIKKEIEMAMVQFSDKEKLVEQLLREKNELVQRVVNQEAEIVELSKLAGEQK 402
Query: 366 RVELQMLSRETEHALETEKLSFTIKQLKDQLQAVS---GDTSVSLEEVKRRDVTIQQ 527
Q+ + EKL+ + QLKD L V + +L+E KR V +++
Sbjct: 403 HAVAQLRKDYNDQIKNGEKLNCNVSQLKDALALVEVERDNAGKALDEEKRNMVALKE 459
>At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyosin
1 [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae};
similar to enterophilin-2L (GI:12718845) [Cavia
porcellus]; similar to latent nuclear antigen
(GI:5669894) [Human herpesvirus 8]; similar to multiple
ligand-binding protein 1 (GI:1403575) [Streptococcus
sp.]
Length = 326
Score = 37.9 bits (84), Expect = 0.004
Identities = 24/104 (23%), Positives = 51/104 (49%)
Frame = +3
Query: 195 APDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVE 374
A +D +N L A+L +EK+R + ENE L Q + + + + D++ K+ ++
Sbjct: 155 ASKEDQINVLKARLYDLEKERVSLSEENETLKDQLKKTDTEMSCAKAKEDEIASKVSQIG 214
Query: 375 LQMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKR 506
+ L E + +K ++++ K+ L+A V E+ ++
Sbjct: 215 -EELEESNETTAKLKKKLESVEEAKETLEAEMKKLKVQTEQWRK 257
>At1g17140.2 68414.m02089 tropomyosin-related similar to Tropomyosin
1. [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae}
Length = 344
Score = 37.1 bits (82), Expect = 0.008
Identities = 30/116 (25%), Positives = 53/116 (45%)
Frame = +3
Query: 159 RSGPPSAVEFVSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKE 338
RSG A + V+ D+ M L A+L +EK+ + ENE L Q +
Sbjct: 156 RSGNDEAEKLVAKEDEIKM--LKARLYDMEKEHESLGKENESLKNQLSDSASEISNVKAN 213
Query: 339 RDDLKEKLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKR 506
D++ K+ R+ ++ + A EKL ++++ KD L+A V E+ ++
Sbjct: 214 EDEMVSKVSRIGEELEESRAKTAHLKEKLE-SMEEAKDALEAEMKKLRVQTEQWRK 268
>At1g17140.1 68414.m02088 tropomyosin-related similar to Tropomyosin
1. [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae}
Length = 344
Score = 37.1 bits (82), Expect = 0.008
Identities = 30/116 (25%), Positives = 53/116 (45%)
Frame = +3
Query: 159 RSGPPSAVEFVSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKE 338
RSG A + V+ D+ M L A+L +EK+ + ENE L Q +
Sbjct: 156 RSGNDEAEKLVAKEDEIKM--LKARLYDMEKEHESLGKENESLKNQLSDSASEISNVKAN 213
Query: 339 RDDLKEKLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKR 506
D++ K+ R+ ++ + A EKL ++++ KD L+A V E+ ++
Sbjct: 214 EDEMVSKVSRIGEELEESRAKTAHLKEKLE-SMEEAKDALEAEMKKLRVQTEQWRK 268
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle myosin
II heavy chain (GI:19879404) [Loligo pealei]; ESTs
gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 36.3 bits (80), Expect = 0.014
Identities = 41/198 (20%), Positives = 89/198 (44%), Gaps = 21/198 (10%)
Frame = +3
Query: 18 KTHMLHKEKFEETKE-------LVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGP-- 170
K +L EK+++ KE L ++L E ++L+ I L++ + +V E +
Sbjct: 511 KLSVLEAEKYQQAKELQITIEDLTKQLTSERERLRSQISSLEEEKNQVNEIYQSTKNELV 570
Query: 171 --PSAVEFVSAPDDDTMNKLTAQLALV-EKQRRQVIVENEKLTWQKESLEHIVDATSK-- 335
+ ++ + DD ++++ ALV EK + E ++ KE +E + + TSK
Sbjct: 571 KLQAQLQVDKSKSDDMVSQIEKLSALVAEKSVLESKFEQVEI-HLKEEVEKVAELTSKLQ 629
Query: 336 -------ERDDLKEKLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLE 494
+RD L+EK ++ ++ + T + + E LS +L+ L+ +
Sbjct: 630 EHKHKASDRDVLEEKAIQLHKELQASHTAISEQKEALSHKHSELEATLKKSQEELDAKKS 689
Query: 495 EVKRRDVTIQQLQNKIAM 548
+ + + +L+ K+ +
Sbjct: 690 VIVHLESKLNELEQKVKL 707
>At5g61550.1 68418.m07724 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain;
protein kinase 1, PnPK1, Populus nigra, EMBL:AB041503
Length = 845
Score = 35.9 bits (79), Expect = 0.018
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +3
Query: 228 AQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVE--LQMLSRETE 401
A L E +R+ E+EKL KE E D SKE+ +E +K E +++ +E
Sbjct: 387 ASKKLTELNQRR-FEESEKLVELKEKEEVAKDTASKEKQRYEEAMKEAEKVKELMMKEAL 445
Query: 402 HALETEKLSFTIKQLKDQLQA 464
H E E + + KD+LQA
Sbjct: 446 HRREAEFKAERDAREKDKLQA 466
>At5g13020.1 68418.m01492 emsy N terminus domain-containing protein
/ ENT domain-containing protein contains Pfam profile
PF03735: ENT domain
Length = 397
Score = 34.7 bits (76), Expect = 0.042
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Frame = +3
Query: 153 PARSGPPSAVEFVSAPDDDTMNKLTAQLALVEKQRRQVIV-----ENEKLTWQKESL-EH 314
P +G PS + SAP N++ Q+ L+E++ I+ +++ +TW+KESL
Sbjct: 29 PTGNGRPSVLN--SAPLSRVHNEMETQIHLIEQEAYSSILRAFKAQSDAITWEKESLITE 86
Query: 315 IVDATSKERDDLKEKLKRVELQMLSRETEHALETEKLSFTIKQL 446
+ ++ +E L RV + R + L ++ QL
Sbjct: 87 LRKELRVSDEEHRELLSRVNADEMIRRIREWRKANSLQSSVPQL 130
>At1g06530.1 68414.m00692 myosin heavy chain-related similar to
myosin heavy chain (GI:1408194) {Placopecten
magellanicus}; similar to Myosin heavy chain, clone 203
(Fragment) (SP:P39922){Hydra attenuata}; contains one
transmembrane domain
Length = 323
Score = 34.7 bits (76), Expect = 0.042
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Frame = +3
Query: 189 VSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKR 368
V ++ M +L ++L +E +++ +N+K ++E E I D KE DLKEK+K
Sbjct: 159 VKEENEKRMKELESKLGALEV--KELDEKNKKFRAEEEMREKI-DNKEKEVHDLKEKIKS 215
Query: 369 VELQMLSRETE-HALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRD 512
+E + +TE TEK+ LKD + V S +E K+ D
Sbjct: 216 LESDVAKGKTELQKWITEKM-VVEDSLKDSEKKVVALESEIVELQKQLD 263
>At5g67240.1 68418.m08475 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 745
Score = 33.9 bits (74), Expect = 0.073
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = +3
Query: 267 IVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRETEHALETEKLSFTIKQL 446
+V++E ++ + H D KE ++LKEKLK +E +S E H+ E E+L +
Sbjct: 661 MVQDESEETKEANANHCEDDHLKEMEELKEKLKAMEF-AISCE-GHSKEIEELKQKLNAK 718
Query: 447 KDQLQA 464
+ Q+QA
Sbjct: 719 EHQIQA 724
>At5g48600.1 68418.m06011 structural maintenance of chromosomes (SMC)
family protein similar to SP|P50532 Chromosome assembly
protein XCAP-C {Xenopus laevis}; contains Pfam profiles
PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1241
Score = 33.1 bits (72), Expect = 0.13
Identities = 32/113 (28%), Positives = 58/113 (51%)
Frame = +3
Query: 204 DDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQM 383
++ ++ L +LA +++ + E+ L Q SLE + E D LKE LK++
Sbjct: 753 ENEVSGLEMELAKSQREIESLNSEHNYLEKQLASLEAASQPKTDEIDRLKE-LKKI---- 807
Query: 384 LSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRDVTIQQLQNKI 542
+S+E + E E L KQLKD+LQ + + E++K + ++++Q I
Sbjct: 808 ISKEEK---EIENLEKGSKQLKDKLQ--TNIENAGGEKLKGQKAKVEKIQTDI 855
>At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)
(FAS1) identical to FAS1 [Arabidopsis thaliana]
GI:4887626
Length = 815
Score = 33.1 bits (72), Expect = 0.13
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Frame = +3
Query: 246 EKQRRQVIVENEKLTWQKES---LEHIVDATSKERDDLKEKLKRVELQMLSRETEHALET 416
++ RQV+ EKL +KE + IVD +KE+++ E KR++ Q E E
Sbjct: 264 KRMERQVL--KEKLQQEKEQKLLQKAIVDENNKEKEE-TESRKRIKKQQDESEKEQKRRE 320
Query: 417 EKLSFTIKQLKDQLQA--------VSGDTSVSLEEVKRRDVTIQQL 530
++ + KQL+ Q QA S D+S++ ++ +VT Q+L
Sbjct: 321 KEQAELKKQLQVQKQASIMERFLKKSKDSSLTQPKLPSSEVTAQEL 366
>At5g61560.1 68418.m07725 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 796
Score = 32.7 bits (71), Expect = 0.17
Identities = 16/73 (21%), Positives = 40/73 (54%)
Frame = +3
Query: 243 VEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRETEHALETEK 422
+ ++R + + LT ++E + +V+ + ++D + + + V + + RETE LE E
Sbjct: 330 LNQRRSEEATRLKNLTIREEEADEVVEMERERQEDAENEAELVR-ECIERETEERLEAEA 388
Query: 423 LSFTIKQLKDQLQ 461
+ +++ K +L+
Sbjct: 389 RAEEVRKEKQRLE 401
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 32.7 bits (71), Expect = 0.17
Identities = 30/176 (17%), Positives = 71/176 (40%), Gaps = 1/176 (0%)
Frame = +3
Query: 9 DMMKTHMLHKEKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEF 188
D+++ H+ + EE K+L K +++ + +E
Sbjct: 385 DLVEKLKTHENQIEEYKKLAHEASGVADTRKVELEDALSKLKNLESTIEELGAKCQGLEK 444
Query: 189 VSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKR 368
S + KL +LA + ++ + L +KE + ++A+ +DL ++L
Sbjct: 445 ESGDLAEVNLKLNLELANHGSEANELQTKLSALEAEKEQTANELEASKTTIEDLTKQLTS 504
Query: 369 VELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLE-EVKRRDVTIQQLQ 533
++ S+ + H E +++ + K++LQ+V L E + D + +++
Sbjct: 505 EGEKLQSQISSHTEENNQVNAMFQSTKEELQSVIAKLEEQLTVESSKADTLVSEIE 560
Score = 31.1 bits (67), Expect = 0.51
Identities = 39/187 (20%), Positives = 80/187 (42%), Gaps = 8/187 (4%)
Frame = +3
Query: 3 QEDMMKTHMLHKEKFEETKELVERLRQENKKL-KFDIQHLDDSRPRVAEGPPARSGPPSA 179
+ D+ + E E+ K E L Q+ +++ + + ++ + + A
Sbjct: 194 ENDLKAAGLQESEVMEKLKSAEESLEQKGREIDEATTKRMELEALHQSLSIDSEHRLQKA 253
Query: 180 VEFVSAPDDDTMN---KLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDL 350
+E ++ D + + KL ++ Q+ + K + KE LE + + + +
Sbjct: 254 MEEFTSRDSEASSLTEKLRDLEGKIKSYEEQLAEASGKSSSLKEKLEQTLGRLAAA-ESV 312
Query: 351 KEKLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAVS---GDTSVSLE-EVKRRDVT 518
EKLK+ Q + + + E+E L+ T QLK ++Q + G SV E +KR +
Sbjct: 313 NEKLKQEFDQAQEKSLQSSSESELLAETNNQLKIKIQELEGLIGSGSVEKETALKRLEEA 372
Query: 519 IQQLQNK 539
I++ K
Sbjct: 373 IERFNQK 379
Score = 28.7 bits (61), Expect = 2.7
Identities = 39/177 (22%), Positives = 77/177 (43%), Gaps = 14/177 (7%)
Frame = +3
Query: 51 ETKELVERLRQENKKLKFDIQHLDDSRPR---VAEGPPARSGPPSAVEFVSAPDDDTMNK 221
E L E+LR K+K + L ++ + + E G +A E V+ ++
Sbjct: 263 EASSLTEKLRDLEGKIKSYEEQLAEASGKSSSLKEKLEQTLGRLAAAESVNEKLKQEFDQ 322
Query: 222 LTAQLALVEKQRRQVIVE-NEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRET 398
+ +L +++ E N +L + + LE ++ + S E++ ++L+ + +ET
Sbjct: 323 -AQEKSLQSSSESELLAETNNQLKIKIQELEGLIGSGSVEKETALKRLEEAIERFNQKET 381
Query: 399 EHALETEKLSF------TIKQLKDQLQAVSGDTSVSLEE----VKRRDVTIQQLQNK 539
E + EKL K+L + V+ V LE+ +K + TI++L K
Sbjct: 382 ESSDLVEKLKTHENQIEEYKKLAHEASGVADTRKVELEDALSKLKNLESTIEELGAK 438
Score = 27.5 bits (58), Expect = 6.3
Identities = 25/117 (21%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Frame = +3
Query: 204 DDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQM 383
+ T++++ AQL + V+ +LT + + EHI + ERD L E++ ++LQ
Sbjct: 580 EKTLSEVKAQLKENVENAATASVKVAELTSKLQEHEHI----AGERDVLNEQV--LQLQK 633
Query: 384 LSRETEHALETEKLSFTIKQ--LKDQLQAVSGDTSVSLEEVKRRDVTIQQLQNKIAM 548
+ + +++ +K + + KQ L+ L+ + + V + ++ L+ K+ +
Sbjct: 634 ELQAAQSSIDEQKQAHSQKQSELESALKKSQEEIEAKKKAVTEFESMVKDLEQKVQL 690
>At5g12150.1 68418.m01426 pleckstrin homology (PH) domain-containing
protein / RhoGAP domain-containing protein weak
similarity to glucocorticoid receptor DNA binding factor
1 [Canis familiaris] GI:23266717; contains Pfam profiles
PF00169: PH domain, PF00620: RhoGAP domain
Length = 827
Score = 32.3 bits (70), Expect = 0.22
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Frame = +3
Query: 171 PSAVEFVSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDL 350
P+ F S+ +D+ + + + ++ R+++ E + + SLE A + R L
Sbjct: 551 PAKGSFDSSGNDELLIQRLEHMK--DELRQRIAKEAKGNAALQASLERRKQALHERRLAL 608
Query: 351 KEKLKRVELQMLS-RETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRDVTIQQ 527
++ + R++ Q+ + R+ ALE LS + Q Q A T LEE+ + + +
Sbjct: 609 EQDVGRLQEQLQAERDLRSALEVG-LSISCGQFSSQ--AADSKTRAELEEIALAEADVAR 665
Query: 528 LQNKIAML 551
L+ K+A L
Sbjct: 666 LKQKVAEL 673
>At2g21380.1 68415.m02544 kinesin motor protein-related
Length = 1058
Score = 32.3 bits (70), Expect = 0.22
Identities = 26/124 (20%), Positives = 58/124 (46%)
Frame = +3
Query: 180 VEFVSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEK 359
+E +SA + +L + + +V + ++L+ QK +L T + D+LK+K
Sbjct: 683 LEIISADNRILQEQLQTKCTENNELHEKVHLLEQRLSSQKATLSCCDVVTEEYVDELKKK 742
Query: 360 LKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRDVTIQQLQNK 539
++ E++ + EH E+ S L+ Q Q ++ + S + E + ++ L ++
Sbjct: 743 VQSQEIENEKLKLEHVQSVEEKS----GLRVQNQKLAEEASYAKELASAAAIELKNLADE 798
Query: 540 IAML 551
+ L
Sbjct: 799 VTKL 802
>At3g50240.1 68416.m05494 kinesin motor protein-related KINESIN-LIKE
PROTEIN KIF4, Homo sapiens, EMBL:AF179308
Length = 1051
Score = 31.9 bits (69), Expect = 0.29
Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Frame = +3
Query: 243 VEKQRRQVIVENEKLTWQKESLEHIVDATSK-ERDDLKEKLKRVELQMLS--RETEHALE 413
+EK++R V E + L + E L D ++ RD+ KLK +E Q+L+ ++ E+ +E
Sbjct: 550 LEKEKRTVQDERDMLLAEVEELAASSDRQAQVARDNHAHKLKALETQILNLKKKQENQVE 609
Query: 414 T----EKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRD 512
+K K+LK ++Q + V L++ +++
Sbjct: 610 VLKQKQKSEDAAKRLKTEIQCIKAQ-KVQLQQKMKQE 645
>At1g77580.2 68414.m09032 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 779
Score = 31.9 bits (69), Expect = 0.29
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +3
Query: 219 KLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSR-E 395
K + A+V + + E E LT + + LE ++ E+ +L+ ++K + +++ E
Sbjct: 416 KCNREKAVVHVEN-SLAAEIEVLTSRTKELEEQLEKLEAEKVELESEVKCNREEAVAQVE 474
Query: 396 TEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVK 503
A E E L+ IKQL+++L+ + + EVK
Sbjct: 475 NSLATEIEVLTCRIKQLEEKLEKLEVEKDELKSEVK 510
>At1g77580.1 68414.m09033 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 629
Score = 31.9 bits (69), Expect = 0.29
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +3
Query: 219 KLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSR-E 395
K + A+V + + E E LT + + LE ++ E+ +L+ ++K + +++ E
Sbjct: 382 KCNREKAVVHVEN-SLAAEIEVLTSRTKELEEQLEKLEAEKVELESEVKCNREEAVAQVE 440
Query: 396 TEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVK 503
A E E L+ IKQL+++L+ + + EVK
Sbjct: 441 NSLATEIEVLTCRIKQLEEKLEKLEVEKDELKSEVK 476
>At5g67270.1 68418.m08480 microtubule-associated EB1 family protein
similar to SP|Q9UPY8 Microtubule-associated protein
RP/EB family member 3 (Protein EB3) {Homo sapiens};
contains Pfam profiles PF00307: Calponin homology (CH)
domain, PF03271: EB1 protein
Length = 329
Score = 31.5 bits (68), Expect = 0.39
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +3
Query: 249 KQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRETEH 404
KQ + V +EK+T L+ +D+ KERD KL+ VE+ + +TEH
Sbjct: 196 KQSKPVPAYDEKIT----ELKLYIDSLEKERDFYFSKLRDVEILCQNPDTEH 243
>At4g40020.1 68417.m05666 hypothetical protein
Length = 615
Score = 31.5 bits (68), Expect = 0.39
Identities = 40/154 (25%), Positives = 60/154 (38%), Gaps = 6/154 (3%)
Frame = +3
Query: 42 KFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFVSAPDDDTMNK 221
+ EETK LVE + E LK I +S+ E S +E + + T
Sbjct: 77 ELEETKALVEESKVEIASLKEKIDTSYNSQDSSEEDEDDSSVQDFDIESLKTEMESTKES 136
Query: 222 LTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDA---TSKERDDLKEKLKRVELQ-MLS 389
L + +V E++ K L+ DA K DDL LK V +
Sbjct: 137 LAQAHEAAQASSLKVSELLEEMKSVKNELKSATDAEMTNEKAMDDLALALKEVATDCSQT 196
Query: 390 RETEHALETEKLSFTI--KQLKDQLQAVSGDTSV 485
+E +ETE + I +Q KD+ + V D +
Sbjct: 197 KEKLVIVETELEAARIESQQWKDKYEEVRKDAEL 230
>At4g33390.1 68417.m04746 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 779
Score = 31.5 bits (68), Expect = 0.39
Identities = 37/145 (25%), Positives = 64/145 (44%)
Frame = +3
Query: 27 MLHKEKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFVSAPDD 206
ML E+ E TK L+E L+ +K + + Q +E R E D
Sbjct: 218 MLAVEELESTKRLIEELKLNLEKAETEEQQAKQD----SELAKLR-----VQEMEQGIAD 268
Query: 207 DTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQML 386
+ AQL + + + I E E + + ++L++ DA KE+ DL K + E +
Sbjct: 269 EASVASKAQLEVAQARHTSAISELESVKEELQTLQNEYDALVKEK-DLAVK-EAEEAVIA 326
Query: 387 SRETEHALETEKLSFTIKQLKDQLQ 461
S+E E + E+L+ + K+ L+
Sbjct: 327 SKEVER--KVEELTIELIATKESLE 349
>At4g14480.1 68417.m02233 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 487
Score = 31.5 bits (68), Expect = 0.39
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 18/159 (11%)
Frame = +3
Query: 36 KEKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFVSAPDDDTM 215
+E+ EE +E+V+ R + D L P E + S P + +DD +
Sbjct: 332 EEEEEEDEEIVKNRRISGWNFREDDLQLSPVFP-ATESDSSESSPREEDQSKDKKEDDNV 390
Query: 216 NKLTAQLAL------VEKQRRQVI-----VENEKLTWQKESLEH-------IVDATSKER 341
+L L + Q +V+ + EKL K+SLEH I++A S ++
Sbjct: 391 TITGYELGLGLSNEEAKNQEGEVVGFDKDLVLEKLKVLKKSLEHQRARVSIIIEALSGDK 450
Query: 342 DDLKEKLKRVELQMLSRETEHALETEKLSFTIKQLKDQL 458
+ EK + EL + + + LETEKL T++ KD +
Sbjct: 451 E---EKSREEELLEMVEKLKIELETEKLK-TLRADKDSV 485
>At3g11820.2 68416.m01448 syntaxin 121 (SYP121) / syntaxin-related
protein (SYR1) contains Pfam profiles: PF00804 syntaxin
and PF05739: SNARE domain; identical to cDNA
syntaxin-related protein At-SYR1 (At-Syr1) GI:4206788,
SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related
protein At-Syr1) {Arabidopsis thaliana}
Length = 315
Score = 31.5 bits (68), Expect = 0.39
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +3
Query: 318 VDATSKERDDLKEKLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEE 497
+D ++ + +KE+LK EL L+ E K K +KD + GD V+L++
Sbjct: 13 LDKFFEDVESVKEELK--ELDRLNETLSSCHEQSKTLHNAKAVKDLRSKMDGDVGVALKK 70
Query: 498 VKRRDVTIQQL 530
K V ++ L
Sbjct: 71 AKMIKVKLEAL 81
>At3g11820.1 68416.m01449 syntaxin 121 (SYP121) / syntaxin-related
protein (SYR1) contains Pfam profiles: PF00804 syntaxin
and PF05739: SNARE domain; identical to cDNA
syntaxin-related protein At-SYR1 (At-Syr1) GI:4206788,
SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related
protein At-Syr1) {Arabidopsis thaliana}
Length = 346
Score = 31.5 bits (68), Expect = 0.39
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +3
Query: 318 VDATSKERDDLKEKLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEE 497
+D ++ + +KE+LK EL L+ E K K +KD + GD V+L++
Sbjct: 44 LDKFFEDVESVKEELK--ELDRLNETLSSCHEQSKTLHNAKAVKDLRSKMDGDVGVALKK 101
Query: 498 VKRRDVTIQQL 530
K V ++ L
Sbjct: 102 AKMIKVKLEAL 112
>At2g36610.1 68415.m04488 homeobox-leucine zipper family protein
similar to homeobox protein PpHB8 (GP:7415628)
[Physcomitrella patens]; contains PfamPF00046: Homeobox
domain
Length = 185
Score = 31.5 bits (68), Expect = 0.39
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Frame = +3
Query: 207 DTMNKLTAQLALVEKQRRQVIV--ENEKLTWQKESLEHI-------VDATSKERDDLKEK 359
D KL+ +L L Q RQ+ V +N K W+ + LEH+ D S+E++ L+E+
Sbjct: 104 DRKMKLSKELGL---QPRQIAVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKELLQEE 160
Query: 360 LKRVELQMLSRE 395
L ++L+ + RE
Sbjct: 161 L--IQLKSMIRE 170
>At1g52430.1 68414.m05919 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1136
Score = 31.5 bits (68), Expect = 0.39
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +3
Query: 222 LTAQLALVEKQRRQVIVENEKLTWQKESLEHI--VDATSKERDDLKEKLKRVELQMLSRE 395
+ A LAL E+++ Q +N+K+ Q+ S+ +D T + + + +LK VE S E
Sbjct: 703 VAADLALEEEKKAQSKKKNDKINKQRASMSKFSPLDQTVEHKPPVNLELKTVEED--SME 760
Query: 396 TEHALETE 419
E+AL +E
Sbjct: 761 PENALASE 768
>At1g24560.1 68414.m03090 expressed protein
Length = 678
Score = 31.5 bits (68), Expect = 0.39
Identities = 30/125 (24%), Positives = 61/125 (48%), Gaps = 14/125 (11%)
Frame = +3
Query: 210 TMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKL-----KRVE 374
+ N+L A K+R + E ++ +KE+L + ++ +K +D++ +KL R
Sbjct: 64 SFNRLKALAVEAIKKRDESKRERDEALKEKENLTNELENVNKGKDEMSKKLDEALRSRDG 123
Query: 375 LQMLSRETEHALET--EKLSFTIKQLKD-------QLQAVSGDTSVSLEEVKRRDVTIQQ 527
L+ + H L + EK+S + K+ + Q +G TSV+ +KR + +++
Sbjct: 124 LKAEIENSSHMLVSGIEKISGKVSSFKNFSNGGLPKSQKYTGLTSVAYGVIKRTNEIVEE 183
Query: 528 LQNKI 542
L +I
Sbjct: 184 LVRQI 188
Score = 30.3 bits (65), Expect = 0.89
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Frame = +3
Query: 18 KTHMLHKEKFEETKELVERLRQ-ENKKLKFDI--QHLDDSRPRVAEGPPARSGPPSAVEF 188
+T L K+ +TKEL +R+RQ E K K I ++++ +A + A E
Sbjct: 488 ETSSLRKQLDTQTKELNQRMRQIEELKEKERIANENVEGLMTDIAAAEEEITRWKVAAEQ 547
Query: 189 VSAPDDDTMNKLTAQLALVE---KQRRQVIVENE-KLTWQKESLEHIVDA-TSKERD--- 344
+A T+QL +++ ++ +Q I+E+E KL +++E+ + A + ER
Sbjct: 548 EAAAGGAVEQDFTSQLYVLKEELEEAKQAIIESEKKLKFKEETAAAAMGARDAAERSLRL 607
Query: 345 -DLKEKLKRVELQMLSRETEHALETEK 422
D + R +Q L+R+ E LET +
Sbjct: 608 ADNRATKLRERIQELNRKVEE-LETHR 633
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 31.1 bits (67), Expect = 0.51
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 2/155 (1%)
Frame = +3
Query: 3 QEDM-MKTHMLHKEKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSA 179
+ED+ KT ML EK ERLR+ + +L+ + L+D R RV S
Sbjct: 468 EEDINRKTTMLEDEK--------ERLRKLDLELQQSLTSLEDKRKRVDSATQKLEALKSE 519
Query: 180 VEFVSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEK 359
+S + KL +L + Q+ +++ E ++L +K E E D+K +
Sbjct: 520 TSELSTLE----MKLKEELDDLRAQKLEMLAEADRLKVEKAKFE-----AEWEHIDVKRE 570
Query: 360 LKRVELQMLSRETE-HALETEKLSFTIKQLKDQLQ 461
R E + ++R+ E ++ + IK+ +D L+
Sbjct: 571 ELRKEAEYITRQREAFSMYLKDERDNIKEERDALR 605
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 31.1 bits (67), Expect = 0.51
Identities = 21/111 (18%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Frame = +3
Query: 219 KLTAQLALVEKQRRQVIVE----NEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQML 386
++T +L + + ++++ E + LT ++ L V+ + D ++K +E ++
Sbjct: 524 EITDELKQAQSKVQELVTELAESKDTLTQKENELSSFVEVHEAHKRDSSSQVKELEARVE 583
Query: 387 SRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRDVTIQQLQNK 539
S E + ++L+ + +++ + +S S ++KR + TIQ+L ++
Sbjct: 584 SAEEQ----VKELNQNLNSSEEEKKILSQQISEMSIKIKRAESTIQELSSE 630
Score = 29.1 bits (62), Expect = 2.1
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 7/156 (4%)
Frame = +3
Query: 51 ETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFVSAPDDDTMNKLTA 230
ET+ +ER +QE +L I + + + + + T+NK+T
Sbjct: 1002 ETEAELEREKQEKSELSNQITDVQKALVEQEAAYNTLEEEHKQINELFKETEATLNKVTV 1061
Query: 231 QLA----LVEKQRRQVIVENEKLTWQKESLEHI---VDATSKERDDLKEKLKRVELQMLS 389
L+E++ ++V + + +E++E + ++ E + L EK+ +E+++
Sbjct: 1062 DYKEAQRLLEERGKEVTSRDSTIGVHEETMESLRNELEMKGDEIETLMEKISNIEVKL-- 1119
Query: 390 RETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEE 497
L +KL T + L ++ +A + + LEE
Sbjct: 1120 -----RLSNQKLRVTEQVLTEKEEAFRKEEAKHLEE 1150
>At2g31370.2 68415.m03834 bZIP transcription factor (POSF21)
identical to GB:Q04088
Length = 398
Score = 31.1 bits (67), Expect = 0.51
Identities = 14/52 (26%), Positives = 32/52 (61%)
Frame = +3
Query: 222 LTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVEL 377
L+AQL L+++ + VEN +L + +++E V + + LKE+++ +++
Sbjct: 243 LSAQLTLLQRDTNGLTVENNELKLRLQTMEQQVHLQDELNEALKEEIQHLKV 294
>At2g31370.1 68415.m03833 bZIP transcription factor (POSF21)
identical to GB:Q04088
Length = 398
Score = 31.1 bits (67), Expect = 0.51
Identities = 14/52 (26%), Positives = 32/52 (61%)
Frame = +3
Query: 222 LTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVEL 377
L+AQL L+++ + VEN +L + +++E V + + LKE+++ +++
Sbjct: 243 LSAQLTLLQRDTNGLTVENNELKLRLQTMEQQVHLQDELNEALKEEIQHLKV 294
>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
myosin heavy chain (GI:1850913) [Entamoeba histolytica];
similar to Intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae]
Length = 555
Score = 31.1 bits (67), Expect = 0.51
Identities = 32/177 (18%), Positives = 78/177 (44%), Gaps = 4/177 (2%)
Frame = +3
Query: 30 LHKEKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFVSAPDDD 209
L +K T++++ E K++ + +HL++ + ++ +S D
Sbjct: 374 LSNQKLRVTEQVLTEKEGELKRI--EAKHLEEQALLEEKIATTHETYRGLIKEISERVDS 431
Query: 210 TM----NKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVEL 377
T+ L+ +L K + +VE K+ + + V KE+D++ ++ + VE
Sbjct: 432 TILNRFQSLSEKLEEKHKSYEKTVVEATKMLL---TAKKCVVEMKKEKDEMAKEKEEVEK 488
Query: 378 QMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRDVTIQQLQNKIAM 548
++ + E E EKL T+ L ++ + + +E + R ++++ +K+ +
Sbjct: 489 KLEGQVREEEKEKEKLKETLLGLGEEKREAIRQLCIWIEHHRDRCEYLEEVLSKMVV 545
Score = 28.3 bits (60), Expect = 3.6
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Frame = +3
Query: 270 VENEKLTWQKESLEHIVDATSKERDDLKEKLKRV-------ELQMLSRETEHALETEKLS 428
VE EKLT + + L ++ + DL +KL+ V E ++ S+ +H E++
Sbjct: 174 VETEKLTSENKELNEKLEVAGETESDLNQKLEDVKKERDGLEAELASKAKDHESTLEEV- 232
Query: 429 FTIKQLKDQLQAVSGDTSVSLEEVKR 506
++LQ +T LE K+
Sbjct: 233 -------NRLQGQKNETEAELEREKQ 251
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 31.1 bits (67), Expect = 0.51
Identities = 27/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Frame = +3
Query: 63 LVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFVSAPDDDTMNKLTAQLAL 242
L + + E + + F + +L D ++ A+E ++ L +L++
Sbjct: 669 LCKEMLGEGELISFQVSNLSDELKIASQELAFVKEEKIALEKDLERSEEKSALLRDKLSM 728
Query: 243 VEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLK--RVELQMLSRETEHALET 416
K+ + ++ + EK Q + + ++ E L + + ++ MLSR+ E E
Sbjct: 729 AIKKGKGLVQDREKFKTQLDEKKSEIEKLMLELQQLGGTVDGYKNQIDMLSRDLERTKEL 788
Query: 417 EKLSFTIKQLKDQLQ 461
E K+ +DQLQ
Sbjct: 789 ETELVATKEERDQLQ 803
Score = 29.9 bits (64), Expect = 1.2
Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 7/177 (3%)
Frame = +3
Query: 39 EKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFVSAPDDDTMN 218
E+ KE+ E +R E +KLK +++ E A+ ++
Sbjct: 288 EQVNREKEMCESMRTEFEKLKAELELEKTKCTNTKEKLSMAVTKGKALVQNRDALKHQLS 347
Query: 219 KLTAQLA--LVEKQRRQVIVE-NEKLTWQ-KESLEHIVDATSK---ERDDLKEKLKRVEL 377
+ T +LA L E Q +++ +E +E + Q ++SL D K E +D L+ EL
Sbjct: 348 EKTTELANRLTELQEKEIALESSEVMKGQLEQSLTEKTDELEKCYAELNDRSVSLEAYEL 407
Query: 378 QMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRDVTIQQLQNKIAM 548
E A +T++L + +L++ A+ + + E+ + D + Q +++
Sbjct: 408 TKKELEQSLAEKTKELEECLTKLQEMSTALD-QSELDKGELAKSDAMVASYQEMLSV 463
>At4g04400.1 68417.m00634 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 735
Score = 30.7 bits (66), Expect = 0.68
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 321 DATSKERDDLKEKLKRVELQMLS-RETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEE 497
D T + D + +++ +EL + +E EH +TE+ S D + S D V+
Sbjct: 594 DETKNKIDAIDVRVQSIELFVADLKEREHGKQTEEASQDGHATDDDVLFASPDGYVTTGN 653
Query: 498 VKRRDVTIQQLQNKIA 545
++RD+ I + ++A
Sbjct: 654 EQQRDIVISERSPEVA 669
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 30.7 bits (66), Expect = 0.68
Identities = 21/95 (22%), Positives = 49/95 (51%)
Frame = +3
Query: 219 KLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRET 398
+L ++ +E+Q+ ++ EKL + +++ D +++ DL+ KLK ++ RE
Sbjct: 403 ELQRKIEELERQKVEIDHSEEKLEKRNQAMNKKFDRVNEKEMDLEAKLKTIK----EREK 458
Query: 399 EHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVK 503
E ++LS +QL +++ D +E+++
Sbjct: 459 IIQAEEKRLSLEKQQLLSDKESLE-DLQQEIEKIR 492
>At5g60930.1 68418.m07643 chromosome-associated kinesin, putative
microtubule-associated motor KIF4 , Mus musculus,
PIR:A54803
Length = 1294
Score = 30.3 bits (65), Expect = 0.89
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +3
Query: 312 HIVDATSKERDDLKEKLKRV--ELQMLSRETEHALETEKLSFTIKQLKDQLQ 461
+++ +S E D ++K+ V EL+ +E EH EKL +K+L +L+
Sbjct: 515 NVLFPSSNESSDCEDKVMDVTDELEFQEKEIEHCSLQEKLDMELKELDKRLE 566
>At5g49930.1 68418.m06182 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 1080
Score = 30.3 bits (65), Expect = 0.89
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +3
Query: 321 DATSKERDDLKEKLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEV 500
D +DD++EK+K+ E + R+ + + E+ + Q + A G+T ++
Sbjct: 777 DTIETSKDDMEEKMKQEEKNAVVRDKPYMSKAERRKLKMGQSGN--TAADGNTGQEKQQR 834
Query: 501 KRRDVT 518
K +DV+
Sbjct: 835 KEKDVS 840
>At3g55060.1 68416.m06115 expressed protein contains weak similarity
to intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae];
expression supported by MPSS
Length = 896
Score = 30.3 bits (65), Expect = 0.89
Identities = 27/131 (20%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Frame = +3
Query: 174 SAVEFVSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDD-- 347
S V + +D+ ++ + L+ Q + E++ W K + + KE+ +
Sbjct: 342 SLVGAIRKLEDERLHLAFENVNLLRSQIVERASAREEIRWLKSDWDLHIQRLEKEKSELQ 401
Query: 348 --LKEKLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLE-EVKRRDVT 518
L+++L R + S+ + LE +KL +++L + ++ + S E E + +D+
Sbjct: 402 AGLEKELDRRSGEWTSKLEKFQLEEKKLRERVRELAEHNVSLQRELSAFHENETENKDM- 460
Query: 519 IQQLQNKIAML 551
I L+ ++A L
Sbjct: 461 ITHLERRVAEL 471
>At1g06070.1 68414.m00636 bZIP transcription factor, putative
(bZIP69) similar to transcriptional activator RF2a
GB:AF005492 GI:2253277 from [Oryza sativa]; contains
Pfam profile PF00170: bZIP transcription factor
Length = 423
Score = 30.3 bits (65), Expect = 0.89
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +3
Query: 222 LTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVEL 377
L+AQL L+++ + VEN +L + +++E V D LKE+++ +++
Sbjct: 252 LSAQLTLLQRDTNGLGVENNELKLRVQTMEQQVHLQDALNDALKEEVQHLKV 303
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 29.9 bits (64), Expect = 1.2
Identities = 33/130 (25%), Positives = 51/130 (39%)
Frame = +3
Query: 36 KEKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFVSAPDDDTM 215
K K ++ +E L NK L L D V E +S E +S + +
Sbjct: 864 KAKDSLAEKKIEELSNLNKSLLVKESELQDV---VFENEKLKSK-----EALSLKTTEEL 915
Query: 216 NKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRE 395
+ + LA EK+ + +VENEKL Q S ++ + L +K +E + E
Sbjct: 916 SDVKQTLADKEKELKTAVVENEKLKAQAASSFQKIEELKNLKQSLLDKENELEGVFQANE 975
Query: 396 TEHALETEKL 425
A E L
Sbjct: 976 ELKAKEASSL 985
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.9 bits (64), Expect = 1.2
Identities = 32/177 (18%), Positives = 76/177 (42%), Gaps = 7/177 (3%)
Frame = +3
Query: 6 EDMMKTHMLHKEKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVE 185
++ +++ K + +ET+++ +E K+ + + + ++S + E + E
Sbjct: 474 KEKVESSSQEKNEDKETEKIESSFLEETKEKEDETKEKEESSSQ--EKTEEKETETKDNE 531
Query: 186 FVSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDL----- 350
S+ ++T +K ++ E ++ ENE T +KE + KE + +
Sbjct: 532 -ESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEES 590
Query: 351 --KEKLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRDV 515
+E+ K E + + +E + E K T + K++ + +V+ E K+ V
Sbjct: 591 APQEETKEKENEKIEKEESASQEETKEKETETKEKEESSSNESQENVNTESEKKEQV 647
>At5g19390.2 68418.m02311 pleckstrin homology (PH) domain-containing
protein / RhoGAP domain-containing protein weak
similarity to rho-GTPase activating protein [Homo
sapiens] GI:14245732; contains Pfam profiles PF00169: PH
domain, PF00620: RhoGAP domain
Length = 870
Score = 29.5 bits (63), Expect = 1.6
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +3
Query: 303 SLEHIVDATSKERDDLKEKLKRVELQMLS-RETEHALETEKLSFTIKQLKDQLQAVSGDT 479
SLE A + R L++ + R++ Q+ + R+ ALE LS + Q V T
Sbjct: 602 SLERRKQALHERRLSLEQDVSRLQEQLQAERDLRAALEVG-LSMSSGQFSSH--GVDSKT 658
Query: 480 SVSLEEVKRRDVTIQQLQNKIAML 551
LEE+ + + +L+ K+A L
Sbjct: 659 RAELEEIALAEADVARLKQKVAEL 682
>At5g19390.1 68418.m02310 pleckstrin homology (PH) domain-containing
protein / RhoGAP domain-containing protein weak
similarity to rho-GTPase activating protein [Homo
sapiens] GI:14245732; contains Pfam profiles PF00169: PH
domain, PF00620: RhoGAP domain
Length = 822
Score = 29.5 bits (63), Expect = 1.6
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +3
Query: 303 SLEHIVDATSKERDDLKEKLKRVELQMLS-RETEHALETEKLSFTIKQLKDQLQAVSGDT 479
SLE A + R L++ + R++ Q+ + R+ ALE LS + Q V T
Sbjct: 602 SLERRKQALHERRLSLEQDVSRLQEQLQAERDLRAALEVG-LSMSSGQFSSH--GVDSKT 658
Query: 480 SVSLEEVKRRDVTIQQLQNKIAML 551
LEE+ + + +L+ K+A L
Sbjct: 659 RAELEEIALAEADVARLKQKVAEL 682
>At4g26020.1 68417.m03747 expressed protein weak similarity to
cardiac muscle factor 1 [Gallus gallus] GI:14422164
Length = 247
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +3
Query: 216 NKLTAQLALVEKQRRQVIVENEKLT-WQKESLEHIVDATSKERD--DLKEKLKRVELQML 386
N +++ ++E + + ENE+L ESL + D LKE+LKRV +
Sbjct: 38 NVESSRREVLEISNKNLKEENERLKKLYTESLNNFADQLEHRTKCHSLKEELKRVNDENK 97
Query: 387 SRETEHALETEKL 425
S+E EH E L
Sbjct: 98 SKEHEHRNALESL 110
>At3g22440.1 68416.m02836 hydroxyproline-rich glycoprotein family
protein identical to hydroxyproline-rich glycoprotein
[Arabidopsis thaliana] gi|9293881|dbj|BAB01784
Length = 532
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 444 LKDQLQAVSGDTSVSLEEVKRRDVTI 521
LK ++ + T SLE +KRR+VTI
Sbjct: 56 LKQMIETLDNQTQTSLESLKRREVTI 81
>At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profile:
PF00076 RNA recognition motif
Length = 636
Score = 29.5 bits (63), Expect = 1.6
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +3
Query: 297 KESLEHIVDATSKERDDLKEKLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGD 476
K+ + ++D KE+ + K K+VE S + + E EK T +LKD+ + D
Sbjct: 39 KKQKKELIDVVQKEKAE-KTVPKKVESS--SSDASDSDEEEKTKETPSKLKDESSSEEED 95
Query: 477 TSVSLEEV 500
S S EE+
Sbjct: 96 DSSSDEEI 103
>At3g07190.1 68416.m00857 expressed protein
Length = 220
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +3
Query: 273 ENEKLTWQKESLEHIVDATSKERDDLKEKLKRV-----ELQMLSRETEHALETEKLSFTI 437
E E+L ++ L+ + TSKE LKEKL V +L+ S+E E LET + T
Sbjct: 128 ELEELRKERIELKEKEEKTSKEIKQLKEKLSCVSENLKKLEKESKEKETKLETAEAHVTA 187
Query: 438 KQ 443
Q
Sbjct: 188 LQ 189
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 29.5 bits (63), Expect = 1.6
Identities = 22/89 (24%), Positives = 41/89 (46%)
Frame = +3
Query: 201 DDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQ 380
DDD + + AL E++RRQ+ + + L + + E + +A + ++ + L+
Sbjct: 522 DDDDSRRRWHRAALDERRRRQLREKEDDLADRLKEEEEVAEAKRSAEEQNLQQQQLDALR 581
Query: 381 MLSRETEHALETEKLSFTIKQLKDQLQAV 467
+LS + ET + S K LQ V
Sbjct: 582 ILSGQAAIGSETVQTSPIENDHKATLQTV 610
>At1g52080.1 68414.m05875 actin binding protein family contains
Prosite PS00019: Actinin-type actin-binding domain
signature 1; similar to actin binding protein
(GI:28071265) [Arabidopsis thaliana]; similar to A-type
inclusion protein (ATI) (Swiss-Prot:P16602) [Cowpox
virus]
Length = 573
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 39 EKFEETKELVERLRQENKKLKFDIQHLDDSR 131
E+ E +E RLR EN++LK D++ L R
Sbjct: 319 EEIETLREDCNRLRSENEELKKDVEQLQGDR 349
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 297 KESLEHIVDATSKERDDLKEKLKRVEL 377
KE+LE + + + E++D EKLK VEL
Sbjct: 621 KEALEWLEENVNAEKEDYDEKLKEVEL 647
>At1g03080.1 68414.m00282 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/71 (22%), Positives = 38/71 (53%)
Frame = +3
Query: 213 MNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSR 392
+ +L ++L +E+ + + LT ++ESL +D K +DL+++ +++++L
Sbjct: 750 LEELKSKLKSLEESCHLLNDDKTTLTSERESLLSHIDTMRKRIEDLEKEHAELKVKVLEL 809
Query: 393 ETEHALETEKL 425
TE +K+
Sbjct: 810 ATERESSLQKI 820
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/94 (23%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +3
Query: 279 EKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLS-RETEHALETEK--LSFTIKQLK 449
EKL + LE+ + + E + ++ KLK +E +S E + L +EK L ++
Sbjct: 667 EKLVQKNLLLENSISDLNAELETIRGKLKTLEEASMSLAEEKSGLHSEKDMLISRLQSAT 726
Query: 450 DQLQAVSGDTSVSLEEVKRRDVTIQQLQNKIAML 551
+ + +S + V + +V +++L++K+ L
Sbjct: 727 ENSKKLSEENMVLENSLFNANVELEELKSKLKSL 760
Score = 27.1 bits (57), Expect = 8.3
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Frame = +3
Query: 204 DDTMNKLTAQLALVEKQRR----QVIVENEKLTWQKESLEHIVDATSKERDDLKE----- 356
D+ + L L+E R+ V +E EK ++E LE S RD+ ++
Sbjct: 988 DENQHSAIENLVLIEFLRQLKSEAVGIETEKKILEEE-LESQCQQLSFSRDETQKLIFVN 1046
Query: 357 -KLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEE 497
+L Q ++RE +E E + QL+D + GD + +L+E
Sbjct: 1047 GELTTKVNQGVNREKVLMVEIEDFHRQVLQLRDDYTILQGDNNKTLDE 1094
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +3
Query: 282 KLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQ 461
K T + + + KE+DDL + + V ++H+ ++L T +Q + L+
Sbjct: 157 KFTRLHKRAKQRIQEIQKEKDDLDARFREVNETAERASSQHSSMQQELERTRQQANEALK 216
Query: 462 AVSGD-TSVSLEEVKRRDVTIQQLQNKI 542
A+ + + K RD TI++L+ +
Sbjct: 217 AMDAERQQLRSANNKLRD-TIEELRGSL 243
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +3
Query: 282 KLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQ 461
K T + + + KE+DDL + + V ++H+ ++L T +Q + L+
Sbjct: 157 KFTRLHKRAKQRIQEIQKEKDDLDARFREVNETAERASSQHSSMQQELERTRQQANEALK 216
Query: 462 AVSGD-TSVSLEEVKRRDVTIQQLQNKI 542
A+ + + K RD TI++L+ +
Sbjct: 217 AMDAERQQLRSANNKLRD-TIEELRGSL 243
>At5g52410.2 68418.m06502 expressed protein
Length = 761
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 288 TWQKESLEHIVDATSKERDDLKEKLKRV--ELQMLSRETEHALETEKLSFTIKQLKDQLQ 461
TW ++ V+ T K +L KLK++ ++ SRE + L EK+S I LK Q+
Sbjct: 643 TWLNAGKQNHVEGTMKRAGNLIAKLKKMAKDVGEKSREVIY-LIIEKISLLISALKQQVH 701
Query: 462 AV 467
+
Sbjct: 702 GM 703
>At5g52410.1 68418.m06503 expressed protein
Length = 510
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 288 TWQKESLEHIVDATSKERDDLKEKLKRV--ELQMLSRETEHALETEKLSFTIKQLKDQLQ 461
TW ++ V+ T K +L KLK++ ++ SRE + L EK+S I LK Q+
Sbjct: 392 TWLNAGKQNHVEGTMKRAGNLIAKLKKMAKDVGEKSREVIY-LIIEKISLLISALKQQVH 450
Query: 462 AV 467
+
Sbjct: 451 GM 452
>At3g47770.1 68416.m05204 ABC transporter family protein AbcA,
Dictyostelium discoideum, U66526
Length = 900
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 225 TAQLALVEKQRRQVIVENEKL--TWQKESLEHIVDATSKERDDLKEKLKRV 371
T Q+ +K+R V VE EKL +KE+++ ++ SK + + LK+V
Sbjct: 542 TPQMLSFQKERSDVSVEMEKLDVIQEKETVKQLIFERSKNHGIVCDNLKKV 592
>At3g04960.1 68416.m00538 expressed protein low similarity to
SP|P32380 NUF1 protein (Spindle poly body spacer protein
SPC110) {Saccharomyces cerevisiae}
Length = 556
Score = 29.1 bits (62), Expect = 2.1
Identities = 25/109 (22%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Frame = +3
Query: 219 KLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERD----DLKEKLKRVELQML 386
+L AQ + ++ ++E+L + E+ ++ V SK D DL K+K +L+
Sbjct: 123 QLNAQENFLGSLHDSMMKKHEELMTELEARKNEVALISKTIDAKTCDLDMKVKDFDLKQT 182
Query: 387 SRETEHALETEKLSFTIKQL---KDQLQAVSGDTSVSLEEVKRRDVTIQ 524
+ ETE + ++KQL +++L+ ++ E+++++V Q
Sbjct: 183 TESERMRKETELMETSLKQLEARENELRLLNETIQGKSMELEKKEVNFQ 231
>At5g53020.1 68418.m06585 expressed protein
Length = 721
Score = 28.7 bits (61), Expect = 2.7
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Frame = +3
Query: 222 LTAQLALVEKQRRQVIVENEKLTWQKESL----EHIVDATSKERDDLKEKLKRVELQMLS 389
L +L +EK++R ++E ++ +KE L + ++ ++ + L+E+L + E ++
Sbjct: 86 LMKELRNIEKRKRHSLLELQERLKEKEGLLESKDKAIEEEKRKCELLEERLVKAEKEVQD 145
Query: 390 -RETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLE 494
RET+ E S +Q K L+ S + E
Sbjct: 146 LRETQERDVQEHSSELWRQKKTFLELASSQRQLEAE 181
>At1g69810.1 68414.m08032 WRKY family transcription factor
Length = 387
Score = 28.7 bits (61), Expect = 2.7
Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = +3
Query: 36 KEKFEETKELVERLRQENKKLKF----DIQHLDDSRPRVAEGPPARSGPPSAVEFVSAPD 203
+E+ + TK VE++R+EN+KLK + + + + +V++ + G S++E
Sbjct: 23 EEELDATKAKVEKVREENEKLKLLLSTILNNYNSLQMQVSKVLGQQQG-ASSMELDHIDR 81
Query: 204 DDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSK 335
D N ++L + Q I + E+ K S +++ ++ K
Sbjct: 82 QDENNDYDVDISLRLGRSEQKISKKEENKVDKISTKNVEESKDK 125
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 28.7 bits (61), Expect = 2.7
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +3
Query: 207 DTMNKLTAQLALVEKQRRQVIVENEKLTWQKE-SLEHIVDATSKERDDLKEKL--KRVEL 377
D ++ L L EK+ + IVENEKL + SL+ I + T +LK+ L K+ EL
Sbjct: 1000 DELSDLKQSLIHKEKELQAAIVENEKLKAEAALSLQRIEELT-----NLKQTLIDKQNEL 1054
Query: 378 QMLSRETEHALETEKLSFTIKQLKDQL 458
Q + E E L+ ++ S ++K++ + L
Sbjct: 1055 QGVFHENEE-LKAKEAS-SLKKIDELL 1079
>At1g04160.1 68414.m00406 myosin family protein contains Pfam
profiles: PF02736 myosin N-terminal SH3-like domain,
PF00063 myosin head (motor domain), PF00612 IQ
calmodulin-binding motif, PF01843: DIL domain
Length = 1500
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +3
Query: 273 ENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRETEHALETEKLSFTIKQLKD 452
ENEKL SLE +D T+KE + R+ L + + KL +++L++
Sbjct: 978 ENEKLKGMVSSLEIKIDETAKE----LHETARISQDRLKQALAAESKVAKLKTAMQRLEE 1033
Query: 453 QLQAVSGDTSVSLEE 497
++ + + + L++
Sbjct: 1034 KISDMETEKQIMLQQ 1048
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 28.3 bits (60), Expect = 3.6
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Frame = +3
Query: 201 DDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERD-----DLKEKLK 365
D+D +++ + L ++Q+ E +K +K + E +VD K D ++KEK K
Sbjct: 161 DEDVVDEKVKE-KLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDEQKSAEIKEKKK 219
Query: 366 RVELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRR 509
+ ++ + + LE E+ S K K++ + D + EE K +
Sbjct: 220 NKDEDVVDEKEKEKLEDEQRSGERK--KEKKKKRKSDEEIVSEERKSK 265
>At5g55820.1 68418.m06956 expressed protein
Length = 1826
Score = 28.3 bits (60), Expect = 3.6
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 2/126 (1%)
Frame = +3
Query: 3 QEDMMKTHMLHKEKFEETKELVERLRQEN--KKLKFDIQHLDDSRPRVAEGPPARSGPPS 176
+++ MK +E+ K+ +E+ ++E KK + ++ + + E R
Sbjct: 1542 KKEAMKLERAKQEQENLKKQEIEKKKKEEDRKKKEAEMAWKQEMEKKKKEEERKRKEFEM 1601
Query: 177 AVEFVSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKE 356
A ++D K + + +RQ +EKL +KE +DA K + +LKE
Sbjct: 1602 ADRKRQREEEDKRLKEAKKRQRIADFQRQQREADEKLQAEKELKRQAMDARIKAQKELKE 1661
Query: 357 KLKRVE 374
E
Sbjct: 1662 DQNNAE 1667
>At5g13560.1 68418.m01566 expressed protein weak similarity to
SP|O42184 Restin (Cytoplasmic linker protein-170)
(CLIP-170) {Gallus gallus}
Length = 679
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +3
Query: 246 EKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRETEHALETEK 422
E + +V+ NE +KE I K+RD+L+ LKRV L + + + TE+
Sbjct: 332 EALKARVVKANETGEKEKELGAEIAQL-EKQRDELEADLKRVNLSLAAAQARFRNATEE 389
>At4g27980.1 68417.m04014 expressed protein
Length = 565
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 249 KQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRETEHALETE 419
KQR + NE+ +++ L + +A ++ +LK K + +EL+M + ETE
Sbjct: 164 KQRAETERRNEESEAREKDLRALEEAVKEKTAELKRKEETLELKMKEEAEKLREETE 220
>At4g18820.1 68417.m02778 expressed protein
Length = 1111
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 198 PDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESL 308
P +D M KL L + + +Q+ V N+KLTW +L
Sbjct: 755 PKED-MEKLRQALKTLSEAEKQLRVSNDKLTWLTAAL 790
>At1g09470.1 68414.m01059 expressed protein ; expression supported
by MPSS
Length = 336
Score = 28.3 bits (60), Expect = 3.6
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 180 VEFVSAPDDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEK 359
VE + A D T K +LA ++ Q E ES SK+ +
Sbjct: 81 VEQIRASDVAT-EKFVKELADIKSQLAATHATAEASALSAESAHSHCRVLSKQLHERTGS 139
Query: 360 LKRVELQM--LSRETEHALETEKL-SFTIKQLKDQLQAVSGDTSVSLEEVKRRD 512
LK E Q+ L + E+ + ++ + KQL+D+L V GD ++ VK ++
Sbjct: 140 LKEHEDQVTRLGEQLENLRKELRVRESSQKQLRDELLKVEGDIMRAVSVVKTKE 193
>At5g61460.1 68418.m07712 structural maintenance of chromosomes (SMC)
family protein very strong similarity to SMC-like protein
(MIM) [Arabidopsis thaliana] GI:5880614; contains Pfam
profile PF02463: RecF/RecN/SMC N terminal domain
Length = 1057
Score = 27.9 bits (59), Expect = 4.8
Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 4/154 (2%)
Frame = +3
Query: 39 EKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFVSAPDDDTMN 218
EK + ++ + K + + + L + R + ++ + P S +E + D T
Sbjct: 791 EKIHYENIMKNKVLPDIKNAEANYEELKNKR-KESDQKASEICPESEIESLGPWDGSTPE 849
Query: 219 KLTAQLALVE----KQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQML 386
+L+AQ+ + ++ +Q + L ESLE + K D +EKL + +
Sbjct: 850 QLSAQITRMNQRLHRENQQFSESIDDLRMMYESLERKIAKKRKSYQDHREKLMACKNALD 909
Query: 387 SRETEHALETEKLSFTIKQLKDQLQAVSGDTSVS 488
SR A S +QL Q A G +S
Sbjct: 910 SR---WAKFQRNASLLRRQLTWQFNAHLGKKGIS 940
>At5g61150.2 68418.m07672 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 623
Score = 27.9 bits (59), Expect = 4.8
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 132 PRVAEGPPARSGPPSAVEFVS-APDDDTMNKLTAQLALVEKQRRQVIVEN-EKLTWQK-- 299
P +EG +S + + S A D D+ NK V K+RRQ +VE+ + + +K
Sbjct: 77 PGESEGEREQSSQEADPQEESEARDSDSDNKEEEHGGRVAKKRRQEVVESGSERSGEKHY 136
Query: 300 ESLEHIVDATSKERDDLKEK 359
ES + VD T R +EK
Sbjct: 137 ESEDEEVDQTRSPRSPSEEK 156
>At5g61150.1 68418.m07671 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 625
Score = 27.9 bits (59), Expect = 4.8
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 132 PRVAEGPPARSGPPSAVEFVS-APDDDTMNKLTAQLALVEKQRRQVIVEN-EKLTWQK-- 299
P +EG +S + + S A D D+ NK V K+RRQ +VE+ + + +K
Sbjct: 77 PGESEGEREQSSQEADPQEESEARDSDSDNKEEEHGGRVAKKRRQEVVESGSERSGEKHY 136
Query: 300 ESLEHIVDATSKERDDLKEK 359
ES + VD T R +EK
Sbjct: 137 ESEDEEVDQTRSPRSPSEEK 156
>At5g45720.1 68418.m05621 hypothetical protein
Length = 900
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 207 DTMNKLTAQLALVEKQRRQVIVENEKLTWQKESL 308
+ M KL L + + +Q+ V N+KLTW +L
Sbjct: 652 EDMEKLKQALKTLSESEKQLRVSNDKLTWLTAAL 685
>At5g27220.1 68418.m03247 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1181
Score = 27.9 bits (59), Expect = 4.8
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Frame = +3
Query: 255 RRQVIVENEKLTWQKESLEHI-VDATSK--ERDDLKEKLKR--VELQMLSRETEHAL-ET 416
R +V + E+L ++SLE V+ SK + ++ E L++ V+L + E +
Sbjct: 101 RSEVEEKREELGCLRKSLEECSVEERSKRGQLSEIVELLRKSQVDLDLKGEELRQMVTHL 160
Query: 417 EKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRDVTIQQLQNKI 542
E+ +K+ K+ L+ EE++R+ + + NKI
Sbjct: 161 ERYRVEVKEEKEHLRRTDNGRRELEEEIERKTKDLTLVMNKI 202
>At4g35720.1 68417.m05069 expressed protein contains Pfam profile
PF03087: Arabidopsis protein of unknown function
Length = 325
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +3
Query: 303 SLEHIVDATSKERDDLKEKLKRVELQMLSRETEHALET 416
SLE VDA R ++K+++K+ ++S+ET+ +LE+
Sbjct: 134 SLESDVDAYVASRKEIKQEIKK--YMVMSKETDASLES 169
>At4g13885.1 68417.m02151 3'-5' exonuclease-related contains weak
similarity to Pfam domain PF01612: 3'-5' exonuclease
Length = 263
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 264 VIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRETEHAL 410
++ ++K T + L ++D+TSKE +D+ L ++L +T AL
Sbjct: 114 ILPSSKKFTLAMQFLCELIDSTSKEEEDVFRVLVYASDELLDVKTYRAL 162
>At4g01780.1 68417.m00233 XH/XS domain-containing protein contains
Pfam profiles PF03469: XH domain, PF03468: XS domain
Length = 456
Score = 27.9 bits (59), Expect = 4.8
Identities = 27/110 (24%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Frame = +3
Query: 240 LVEKQRRQVIVENEKLTWQK-----ESLEHIVDATSKERDDLKEKLKRVELQMLSRETEH 404
L+E +++++ ++ +L + E ++ D +++++L EK+ R+E Q+ +
Sbjct: 189 LLESEKKKLEIKGNELAKPQVHNGTERMKLSEDLEQRQKEELHEKIIRLERQI---DQVQ 245
Query: 405 ALETEKLSFTIKQLKDQLQAVSGDTS-VSLEEVKRRDVTIQQLQNKIAML 551
A+E E ++QLK QL + S + VK D+ + L K A L
Sbjct: 246 AIELE-----VEQLKGQLNVMKHMASDGDAQVVKEVDIIFKDLVEKEAEL 290
>At3g45380.1 68416.m04899 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 690
Score = 27.9 bits (59), Expect = 4.8
Identities = 20/89 (22%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Frame = +3
Query: 303 SLEHIVDATSKERDDLKEKLKRVELQMLS--------RETEHALETEKLSFTIKQLKDQL 458
S+ + +K D+ K+K+ +++++ S +E EH +TE+ S D +
Sbjct: 536 SITSLTQMMTKGFDETKDKIDAIDVRVQSIKLFVADLKEREHGKQTEEASQHGHARDDDV 595
Query: 459 QAVSGDTSVSLEEVKRRDVTIQQLQNKIA 545
S D V+ ++RD+ I + ++A
Sbjct: 596 LFASPDGYVTTGNKQQRDILISEHSPEVA 624
>At1g67130.1 68414.m07637 F-box family protein contains Pfam
PF00646: F-box domain
Length = 391
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +3
Query: 360 LKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRDVTI 521
L VE+Q + ++E +++ ++ +KD Q + TS++L E KR+ +I
Sbjct: 270 LLSVEIQGVGEDSEWFSNYQRVYVFVEHVKDLHQFDNTKTSINLPEQKRKPTSI 323
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 27.5 bits (58), Expect = 6.3
Identities = 20/93 (21%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +3
Query: 222 LTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRETE 401
L +L + ++ ++ EN+KLT + +L+ + +ER L+ +L+ ++ E
Sbjct: 710 LNNKLLKFQGEKEHLVEENDKLTQELLTLQEHMSTVEEERTHLEVELREAIARLDKLAEE 769
Query: 402 HALETEKLSFTIKQLKDQLQA-VSGDTSVSLEE 497
+ T + ++ D A VSG + + E
Sbjct: 770 NTSLTSSIMVEKARMVDNGSADVSGLINQEISE 802
>At4g18950.1 68417.m02792 ankyrin protein kinase, putative similar
to ankyrin-kinase [Medicago truncatula]
gi|18700701|gb|AAL78674
Length = 459
Score = 27.5 bits (58), Expect = 6.3
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 201 DDDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKR 368
DDD + K +LAL+++ R IV+ Q + + + R DL+E LKR
Sbjct: 193 DDDQVRKFHDELALLQRLRHPNIVQFLGAVTQSNPMMIVTEYL--PRGDLRELLKR 246
>At3g21150.1 68416.m02672 zinc finger (B-box type) family protein
contains Pfam profile:PF01760 CONSTANS family zinc
finger
Length = 225
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 108 CRTLTSCSLDGVSRPV-PWSLRTSPCAAYGSSSC 10
C S + + VS P+ PW RT+ C+ SSSC
Sbjct: 47 CPNCKSLTQNFVSGPLLPWPPRTTCCSESSSSSC 80
>At2g27170.1 68415.m06029 structural maintenance of chromosomes
(SMC) family protein similar to basement
membrane-associated chondroitin proteoglycan Bamacan
[Rattus norvegicus] GI:1785540; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain. No suitalble
start codon was identified.
Length = 1207
Score = 27.5 bits (58), Expect = 6.3
Identities = 24/119 (20%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Frame = +3
Query: 204 DDTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQM 383
D ++ +L VE R + E+ K+ + +E D + + LKE K ++
Sbjct: 229 DKELHDAREKLEQVEVARTKASEESTKMY---DRVEKAQDDSKSLDESLKELTKELQTLY 285
Query: 384 LSRETEHALETEKLSFTIK---QLKDQLQAVSGDTSVSLEEVKRRDVTIQQLQNKIAML 551
+ET A +T+ L K +KD ++G+ + +++ + +++Q+ + L
Sbjct: 286 KEKETVEAQQTKALKKKTKLELDVKDFQDRITGNIQSKNDALEQLNTVEREMQDSLREL 344
>At2g20290.1 68415.m02370 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1493
Score = 27.5 bits (58), Expect = 6.3
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +3
Query: 273 ENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRETEHALETEKLSFTIKQLKD 452
ENEKL SLE +D T K+ E+ K++ + L + + + + L + L++
Sbjct: 983 ENEKLKSLVTSLELKIDETEKK----FEETKKISEERLKKALDAENKIDNLKTAMHNLEE 1038
Query: 453 QLQAVSGDTSVSLEEV 500
+L+ V + + E V
Sbjct: 1039 KLKEVKLENNFLKESV 1054
>At1g58100.1 68414.m06585 TCP family transcription factor, putative
similar to auxin-induced basic helix-loop-helix
transcription factor GI:5731257 from [Gossypium
hirsutum]
Length = 401
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 54 TKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAVEFVSAP 200
+KE +R + ENK LK + P A PP+RSG + + P
Sbjct: 215 SKENDDRKQNENKSLKESETSGPTAAPMWAVAPPSRSGAGNTFWMLPVP 263
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 27.1 bits (57), Expect = 8.3
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +3
Query: 246 EKQRRQVIVENEKLTWQKE-SLEHIVDATSKERDDLKEKLKRVELQMLSRETEHALETEK 422
EKQ+ + E EKL +KE E I +ER+ ++ ++ E L E E +E E+
Sbjct: 140 EKQKERER-EREKLEREKEREREKIEREKEREREKMEREIFEREKDRLKLEKEREIERER 198
Query: 423 LSFTIKQLKD-QLQAVSGDTSVSLEEVKR 506
I++ K + Q D + +++ +
Sbjct: 199 EREKIEREKSHEKQLGDADREMVIDQTDK 227
>At5g66660.1 68418.m08403 hypothetical protein
Length = 398
Score = 27.1 bits (57), Expect = 8.3
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Frame = +3
Query: 207 DTMNKLTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQML 386
D++ ++ L + + +VI+E+ + W+ + L+ +VD K + VE +
Sbjct: 85 DSLMEVYGFLLELNQNAVRVIIESREDVWKNKDLKSLVDVYFKSTSKTLDFCNTVENCVK 144
Query: 387 SRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRR-DVTIQQLQNKIAM 548
E + + F +K Q +A S DT + ++ K++ T+++L AM
Sbjct: 145 RTEISQLI----IRFAVK----QFEAESVDTDLGGDKKKKKYTKTLEELNKFKAM 191
>At5g26350.1 68418.m03150 hypothetical protein
Length = 126
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/43 (30%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 216 NKLTAQLALVEKQRRQVIVENEKLTWQKESLE-HIVDATSKER 341
NKL + +EK+++Q+ E ++L +K+ LE ++ A +E+
Sbjct: 58 NKLEEEKKKLEKEKKQLEEEKKQLEEEKKQLEFEVMGANEREK 100
>At5g25450.1 68418.m03023 ubiquinol-cytochrome C reductase complex
14 kDa protein, putative similar to SP|P48502
Ubiquinol-cytochrome C reductase complex 14 kDa protein
(EC 1.10.2.2) (CR14) {Solanum tuberosum}; contains Pfam
profile PF02271: Ubiquinol-cytochrome C reductase
complex 14kD subunit
Length = 122
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 345 DLKEKLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAV 467
D+KE L R+ +++ + + LS + L D LQAV
Sbjct: 46 DIKEALNRLPREIVDARNQRLMRAMDLSMKHEYLPDNLQAV 86
>At3g45850.1 68416.m04962 kinesin motor protein-related
kinesin-related protein TKRP125, Nicotiana tabacum,
PIR:T02017
Length = 1058
Score = 27.1 bits (57), Expect = 8.3
Identities = 18/80 (22%), Positives = 37/80 (46%)
Frame = +3
Query: 222 LTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVELQMLSRETE 401
LTA+L+ ++ + + E E + E +AT KE++ + L + E ++ R +
Sbjct: 477 LTAELSEKLEKTEKKLEETEHSLFDLEEKYRQANATIKEKEFVISNLLKSEKSLVERAFQ 536
Query: 402 HALETEKLSFTIKQLKDQLQ 461
E E S + L +++
Sbjct: 537 LRTELESASSDVSNLFSKIE 556
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 27.1 bits (57), Expect = 8.3
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +3
Query: 213 MNKLTAQLALVEKQRRQVIVEN---EKLTWQKESLEHIVDATSKERDDLKEKLKRVELQM 383
+N+L + LV + R++ E EKL Q ESLE+ + ++++ L+ KL R +L +
Sbjct: 205 INQLNSAKDLVTELGRELSSEKKLCEKLKDQIESLENSLSKAGEDKEALETKL-REKLDL 263
Query: 384 LSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEEVKRRDVTIQQLQNKIA 545
+ + LS +K +++ Q + + E+K + Q +A
Sbjct: 264 VEGLQD---RINLLSLELKDSEEKAQRFNASLAKKEAELKELNSIYTQTSRDLA 314
>At3g02930.1 68416.m00288 expressed protein ; expression supported
by MPSS
Length = 806
Score = 27.1 bits (57), Expect = 8.3
Identities = 27/122 (22%), Positives = 56/122 (45%), Gaps = 13/122 (10%)
Frame = +3
Query: 204 DDTMNK---LTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKEKLKRVE 374
D+ NK L +L K + V +T Q E + E DLKEK++ +E
Sbjct: 309 DEWQNKAKELEKRLEEANKLEKCASVSLVSVTKQLEVSNSRLHDMESEITDLKEKIELLE 368
Query: 375 LQMLSRETEHALETEKLSFT----------IKQLKDQLQAVSGDTSVSLEEVKRRDVTIQ 524
+ + S++ + +KL ++LK++L+ V+ + + +L++ + ++Q
Sbjct: 369 MTVASQKVDLEKSEQKLGIAEEESSKSEKEAEKLKNELETVNEEKTQALKKEQDATSSVQ 428
Query: 525 QL 530
+L
Sbjct: 429 RL 430
>At2g32230.1 68415.m03938 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 572
Score = 27.1 bits (57), Expect = 8.3
Identities = 19/66 (28%), Positives = 38/66 (57%)
Frame = +3
Query: 318 VDATSKERDDLKEKLKRVELQMLSRETEHALETEKLSFTIKQLKDQLQAVSGDTSVSLEE 497
VDA E + + E+ + L +S +T++A +K+ T+++L+D ++ VS T +EE
Sbjct: 233 VDAHMVESEVVPEEPELAALLKVSMDTKNA---DKVYKTLQRLRDLVRQVSKSTFDMIEE 289
Query: 498 VKRRDV 515
+ +V
Sbjct: 290 WFKSEV 295
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 27.1 bits (57), Expect = 8.3
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +3
Query: 330 SKERDDLKEKLKRVELQMLSRETEHALETEKLSFTIKQ--LKDQLQAVSGDTSVSLEEVK 503
SKE +K+K+K +E Q+ +ET ALE+ F K+ LK++++ + + +E+
Sbjct: 901 SKEVAVMKDKIKLLEGQIKLKET--ALESSSNMFIEKEKNLKNRIEELETKLDQNSQEMS 958
Query: 504 RRDVTIQQLQNKIAML 551
++ Q I +L
Sbjct: 959 ENELLNGQENEDIGVL 974
>At1g18370.1 68414.m02295 kinesin motor family protein (NACK1)
similar to kinesin heavy chain isolog GB:AAB63609
GI:2262101 from [Arabidopsis thaliana]
Length = 974
Score = 27.1 bits (57), Expect = 8.3
Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 3/152 (1%)
Frame = +3
Query: 3 QEDMMKTHMLHKEKFEETKELVERLRQENKKLKFDIQHLDDSRPRVAEGPPARSGPPSAV 182
Q+ M+ L +++ ++ + +E LRQ KL+ D Q P + PP R +V
Sbjct: 397 QQMEMEIGELRRQR-DDAQIQLEELRQ---KLQGDQQQNKGLNPFESPDPPVRKCLSYSV 452
Query: 183 EFVSAPDDDTMNK--LTAQLALVEKQRRQVIVENEKLTWQKESLEHIVDATSKERDDLKE 356
+ ++ T+N+ + + + RQ L + LEH+ + +E E
Sbjct: 453 AVTPSSENKTLNRNERARKTTMRQSMIRQSSTAPFTLMHEIRKLEHLQEQLGEEATKALE 512
Query: 357 KL-KRVELQMLSRETEHALETEKLSFTIKQLK 449
L K V L + + A KL I++++
Sbjct: 513 VLQKEVACHRLGNQ-DAAQTIAKLQAEIREMR 543
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,643,622
Number of Sequences: 28952
Number of extensions: 147267
Number of successful extensions: 1012
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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