Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30207
         (518 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49074-2|CAE48829.1|  807|Caenorhabditis elegans Hypothetical pr...    30   0.86 
Z49074-1|CAA88893.3|  771|Caenorhabditis elegans Hypothetical pr...    30   0.86 
Z49073-9|CAE48845.1|  807|Caenorhabditis elegans Hypothetical pr...    30   0.86 
Z49073-8|CAA88892.3|  771|Caenorhabditis elegans Hypothetical pr...    30   0.86 
L14429-4|AAA28217.2|  171|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z81116-13|CAB03300.1|  245|Caenorhabditis elegans Hypothetical p...    27   8.0  

>Z49074-2|CAE48829.1|  807|Caenorhabditis elegans Hypothetical
           protein ZK970.1b protein.
          Length = 807

 Score = 30.3 bits (65), Expect = 0.86
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
 Frame = +2

Query: 14  CVEKTSFLLGGWRGEFRNVTCKTQPWTTVYDTKKSCH--LNSKLYRI---GYEI-----Q 163
           C     F  GGW  +  +V  K   W T+Y+T+++ H  +   +++I    Y +     +
Sbjct: 127 CDNFYQFACGGWINQ--SVNLKYDSWNTLYETQRTAHDQIVQAMHKINDGSYPLPTNAGE 184

Query: 164 KAFYSLYEACFDLSEMK 214
           +A   +YE C D   ++
Sbjct: 185 RAAAKMYEQCMDTDTLE 201


>Z49074-1|CAA88893.3|  771|Caenorhabditis elegans Hypothetical
           protein ZK970.1a protein.
          Length = 771

 Score = 30.3 bits (65), Expect = 0.86
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
 Frame = +2

Query: 14  CVEKTSFLLGGWRGEFRNVTCKTQPWTTVYDTKKSCH--LNSKLYRI---GYEI-----Q 163
           C     F  GGW  +  +V  K   W T+Y+T+++ H  +   +++I    Y +     +
Sbjct: 91  CDNFYQFACGGWINQ--SVNLKYDSWNTLYETQRTAHDQIVQAMHKINDGSYPLPTNAGE 148

Query: 164 KAFYSLYEACFDLSEMK 214
           +A   +YE C D   ++
Sbjct: 149 RAAAKMYEQCMDTDTLE 165


>Z49073-9|CAE48845.1|  807|Caenorhabditis elegans Hypothetical
           protein ZK970.1b protein.
          Length = 807

 Score = 30.3 bits (65), Expect = 0.86
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
 Frame = +2

Query: 14  CVEKTSFLLGGWRGEFRNVTCKTQPWTTVYDTKKSCH--LNSKLYRI---GYEI-----Q 163
           C     F  GGW  +  +V  K   W T+Y+T+++ H  +   +++I    Y +     +
Sbjct: 127 CDNFYQFACGGWINQ--SVNLKYDSWNTLYETQRTAHDQIVQAMHKINDGSYPLPTNAGE 184

Query: 164 KAFYSLYEACFDLSEMK 214
           +A   +YE C D   ++
Sbjct: 185 RAAAKMYEQCMDTDTLE 201


>Z49073-8|CAA88892.3|  771|Caenorhabditis elegans Hypothetical
           protein ZK970.1a protein.
          Length = 771

 Score = 30.3 bits (65), Expect = 0.86
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
 Frame = +2

Query: 14  CVEKTSFLLGGWRGEFRNVTCKTQPWTTVYDTKKSCH--LNSKLYRI---GYEI-----Q 163
           C     F  GGW  +  +V  K   W T+Y+T+++ H  +   +++I    Y +     +
Sbjct: 91  CDNFYQFACGGWINQ--SVNLKYDSWNTLYETQRTAHDQIVQAMHKINDGSYPLPTNAGE 148

Query: 164 KAFYSLYEACFDLSEMK 214
           +A   +YE C D   ++
Sbjct: 149 RAAAKMYEQCMDTDTLE 165


>L14429-4|AAA28217.2|  171|Caenorhabditis elegans Hypothetical
           protein ZK652.8 protein.
          Length = 171

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +2

Query: 56  EFRNVTCKTQPWTT-VYDTK-KSCHLNSKLYRIGYEIQKAFYSLYEACFDLSEMKTHY 223
           E  NV  +T+ W   ++D   K   ++ ++ R+G E++K    +  AC D+  M+  +
Sbjct: 100 EIENVETQTRIWLNELHDVHDKRVDIDCQMIRLGSEVKKNETYVQLACIDIERMELRH 157


>Z81116-13|CAB03300.1|  245|Caenorhabditis elegans Hypothetical
           protein T06C12.14 protein.
          Length = 245

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -1

Query: 185 RTANRMPSVFHIRS--CTAYCLNGNSFSCRTPWSTAEFCT*RF*T 57
           RT +R  S    RS  CT++ ++ +S +CR  WS   FCT  F T
Sbjct: 188 RTCSRCASATTTRSSTCTSF-ISDSSTACRA-WSLNGFCTNTFYT 230


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,396,671
Number of Sequences: 27780
Number of extensions: 246896
Number of successful extensions: 639
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)