Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30207
         (518 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               26   0.20 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   4.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   7.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.6  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   7.6  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +2

Query: 23  KTSFLLGGWRGEFRNVTCKTQPWTTVY 103
           K    LGGW    R+     QPW  V+
Sbjct: 565 KLGSALGGWHPSDRSARLMLQPWANVF 591


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -2

Query: 421 QVTTSQSLSFVIQLSAVRSEDPLHNFHLIPFKIQFTN 311
           Q+T S ++S   ++S V   DP+ +    P    FT+
Sbjct: 9   QITNSTTMSVKNEISTVEPVDPVKSLVCSPDLSVFTS 45


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +2

Query: 317 KLYLKRNQMEIMERILGTNSTELYNKRQALTRGHLAPR 430
           +LY K     ++E +   N  E  N+   L +  + PR
Sbjct: 54  ELYQKARTFNLVENLDNYNDKEAVNEFMQLLKHGMLPR 91


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +2

Query: 317 KLYLKRNQMEIMERILGTNSTELYNKRQALTRGHLAPR 430
           +LY K     ++E +   N  E  N+   L +  + PR
Sbjct: 54  ELYQKARTFNLVENLDNYNDKEAVNEFMQLLKHGMLPR 91


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 305 VPISKLYLKRNQMEIMERILGTNST 379
           V ISKL  KRN  +I    + +N T
Sbjct: 516 VDISKLVNKRNNAKIYTSSVNSNLT 540


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,062
Number of Sequences: 438
Number of extensions: 2824
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)