Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30206
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    26   0.23 
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   2.1  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   2.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.5  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = +3

Query: 381 KLFFVIVFIDQNVF--ITFLMLNYKVTRVVI 467
           KL   ++FI  NVF  +  LM NY  TR+++
Sbjct: 92  KLRHYLIFIFVNVFFWVIILMSNYAFTRIIL 122


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 292 IKHVIQDGRHFPRKTIRNTTVIIW 363
           ++H+    R  P   I N TVI W
Sbjct: 218 LQHIFVKSRPSPATIISNVTVISW 241


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 292 IKHVIQDGRHFPRKTIRNTTVIIW 363
           ++H+    R  P   I N TVI W
Sbjct: 218 LQHIFVKSRPSPATIISNVTVISW 241


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 292 IKHVIQDGRHFPRKTIRNTTVIIW 363
           ++H+    R  P   I N TVI W
Sbjct: 538 LQHIFVKSRPSPATIISNVTVISW 561


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 321 MSAILNHVFNSMLRGLPANNHV 256
           +  IL H+FN +++ +  N+ V
Sbjct: 68  VGCILKHIFNILMKNVTLNDVV 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,587
Number of Sequences: 336
Number of extensions: 2957
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)