Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30205
(370 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2 |Schizosac... 120 5e-29
SPCC1259.09c |||pyruvate dehydrogenase protein x component|Schiz... 88 4e-19
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 37 9e-04
SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces pom... 33 0.019
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 28 0.53
SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces po... 27 1.2
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 26 1.6
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 26 1.6
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 2.1
SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces pomb... 25 2.8
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 24 6.5
SPAC20H4.05c |||adducin|Schizosaccharomyces pombe|chr 1|||Manual 24 6.5
SPCC1020.08 |||wybutosine biosynthesis protein Tyw1|Schizosaccha... 24 8.6
SPAC8C9.16c |mug63||TLDc domain protein 1|Schizosaccharomyces po... 24 8.6
>SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 483
Score = 120 bits (290), Expect = 5e-29
Identities = 58/101 (57%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
Frame = +3
Query: 57 PSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKI 236
P+H +N+PALSPTM +G+I +++KK GDK+ GD+LCEIETDKA + FE +EGYLAKI
Sbjct: 51 PAHTVINMPALSPTMTTGNIGAFQKKIGDKIEPGDVLCEIETDKAQIDFEQQDEGYLAKI 110
Query: 237 LIPAGTKGVPVGKLLCIIVGDQNDVAAFKDFK-DDSXPATP 356
LI GTK VPVGK L + V ++ DVAA DF +DS P
Sbjct: 111 LIETGTKDVPVGKPLAVTVENEGDVAAMADFTIEDSSAKEP 151
>SPCC1259.09c |||pyruvate dehydrogenase protein x
component|Schizosaccharomyces pombe|chr 3|||Manual
Length = 456
Score = 88.2 bits (209), Expect = 4e-19
Identities = 46/108 (42%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Frame = +3
Query: 27 TVQMRYY--SSLPSHIKV-NLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATM 197
+V+ RY+ S+L + +PALSPTME G+I W KEGD GD+L E+ETDKATM
Sbjct: 20 SVKQRYFHCSALNGVASMFRMPALSPTMEEGNITKWHFKEGDSFKSGDILLEVETDKATM 79
Query: 198 GFETPEEGYLAKILIPAGTKGVPVGKLLCIIVGDQNDVAAFKDFKDDS 341
E + G LAK+LI G+ +PVGK + I+ ++++ + KD++
Sbjct: 80 DVEVQDNGILAKVLIEKGS-NIPVGKNIAIVADAEDNLKDLELPKDEA 126
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 37.1 bits (82), Expect = 9e-04
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +3
Query: 69 KVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPA 248
++ P ++ G++ W K+ G+ +++ + + +ETDK P+ G L + L+
Sbjct: 44 RIKTPPFPESITEGTLAQWLKQPGEYVNKDEEIASVETDKIDAPVTAPDAGVLKEQLVKE 103
Query: 249 G 251
G
Sbjct: 104 G 104
>SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1185
Score = 32.7 bits (71), Expect = 0.019
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 105 SGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAG 251
SG+IV KEG K+ +GD++ + K + P G L + + G
Sbjct: 1122 SGTIVEIRVKEGAKVKKGDIIAVLSAMKMEIVISAPHSGVLKSLAVVQG 1170
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 27.9 bits (59), Expect = 0.53
Identities = 19/75 (25%), Positives = 32/75 (42%)
Frame = +3
Query: 75 NLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGT 254
N P T G +V + + G+ + G+ E+E K M E+G + I P +
Sbjct: 708 NDPTQLRTPSPGKLVRFLVETGEHIKAGEAYAEVEVMKMIMPLVATEDGVVQLIKQPGAS 767
Query: 255 KGVPVGKLLCIIVGD 299
+ G +L I+ D
Sbjct: 768 --LDAGDILGILTLD 780
>SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 26.6 bits (56), Expect = 1.2
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 141 DKLSEGD--LLCEIETDKATMGFETPEEGYLAKILIPAGTKGV 263
D+L G L + + DK + +ETP EGY +L+ A K V
Sbjct: 798 DQLQPGKVALFVDWQIDKFSFFYETPAEGY--NLLVEANEKSV 838
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 26.2 bits (55), Expect = 1.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 190 QLWALRHLKKVTWPKY*FRPVQRECL 267
+LW L + K+VTW Y + R CL
Sbjct: 260 ELWCLLNDKRVTWKAYAGHWIARVCL 285
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 26.2 bits (55), Expect = 1.6
Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Frame = +3
Query: 12 STPQWTVQMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDK- 188
+TP W V+ S+L + + + PAL P+ V KK+ + +++
Sbjct: 651 NTPSWGVRKARASALNARSEEDFPALPPSTSKRISVQLGKKQARPVDSWGSTPNTSSNRN 710
Query: 189 -ATMGFETPEEGYLAKILIPAG 251
TMG + G +L G
Sbjct: 711 SNTMGVSKKKNGKKQTVLFHIG 732
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.8 bits (54), Expect = 2.1
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +1
Query: 214 KKVTWPKY*FRPVQRECLSGNYCALLLEIRMMXRLSKISKMTHXLQHLKNRL 369
KK+T + ++ E +S + ++ ++ LSK SK+ ++HLKN++
Sbjct: 948 KKLTARQEEISNLKEENMSQSQAITSVKSKLDETLSKSSKLEADIEHLKNKV 999
>SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 504
Score = 25.4 bits (53), Expect = 2.8
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +3
Query: 6 VLSTPQWTVQMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSE 155
+++ P W YY +P H + L T+ S WE++ G++ ++
Sbjct: 265 LMNDPYWNRGF-YYDGVPPHTGMKLAREVATISYRSGPEWEQRFGNRRAD 313
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 24.2 bits (50), Expect = 6.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 27 TVQMRYYSSLPSHIKVNLP 83
T+ + YY ++P HI+ N P
Sbjct: 468 TLGIEYYGNIPVHIQENAP 486
>SPAC20H4.05c |||adducin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 221
Score = 24.2 bits (50), Expect = 6.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 132 KEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTK 257
+ GD G+L+CEI D T G+ T A ++ P+G +
Sbjct: 13 RSGDLKKCGELICEICRDLYTSGWVTGTGD--AIVIAPSGVQ 52
>SPCC1020.08 |||wybutosine biosynthesis protein
Tyw1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 688
Score = 23.8 bits (49), Expect = 8.6
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Frame = +3
Query: 87 LSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMG-FETPEEGYL-----AKILIPA 248
L+PT + +++ W + + L G LL TD + + + G + A+ +P
Sbjct: 230 LAPTAQIDALLQWTRSVAECLKNGTLLKIGNTDSLSSDVMDVEDMGSMMAKAKAEAALPV 289
Query: 249 GTK 257
GTK
Sbjct: 290 GTK 292
>SPAC8C9.16c |mug63||TLDc domain protein 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 188
Score = 23.8 bits (49), Expect = 8.6
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 54 LPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIE 179
L SHI NLPA + E+ + + +G L L CE E
Sbjct: 19 LASHIVENLPARYASAETWKRIYSLQHDGASLQTMYLACEKE 60
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,543,898
Number of Sequences: 5004
Number of extensions: 30578
Number of successful extensions: 87
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 116121426
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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