Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30205
(370 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g13930.1 68416.m01759 dihydrolipoamide S-acetyltransferase, p... 120 4e-28
At3g52200.1 68416.m05733 dihydrolipoamide S-acetyltransferase, p... 116 5e-27
At1g54220.1 68414.m06182 dihydrolipoamide S-acetyltransferase, p... 115 1e-26
At1g34430.1 68414.m04277 dihydrolipoamide S-acetyltransferase, p... 75 1e-14
At3g25860.1 68416.m03222 dihydrolipoamide S-acetyltransferase (L... 69 1e-12
At5g55070.1 68418.m06864 2-oxoacid dehydrogenase family protein ... 45 1e-05
At3g06850.2 68416.m00813 branched chain alpha-keto acid dehydrog... 38 0.002
At3g06850.1 68416.m00812 branched chain alpha-keto acid dehydrog... 38 0.002
At5g15530.1 68418.m01818 biotin carboxyl carrier protein 2 (BCCP... 30 0.55
At3g15690.1 68416.m01988 biotin carboxyl carrier protein of acet... 29 0.97
At5g57550.1 68418.m07190 xyloglucan:xyloglucosyl transferase / x... 29 1.3
At5g23110.1 68418.m02703 zinc finger (C3HC4-type RING finger) fa... 29 1.3
At3g15690.2 68416.m01989 biotin carboxyl carrier protein of acet... 29 1.3
At1g66270.2 68414.m07524 beta-glucosidase (PSR3.2) nearly identi... 28 1.7
At1g66270.1 68414.m07523 beta-glucosidase (PSR3.2) nearly identi... 28 1.7
At1g68270.1 68414.m07798 AMP-dependent synthetase and ligase fam... 28 2.2
At5g63530.1 68418.m07974 copper chaperone (CCH)-related low simi... 27 2.9
At5g16390.1 68418.m01915 biotin carboxyl carrier protein 1 (BCCP... 27 2.9
At1g65880.1 68414.m07476 AMP-dependent synthetase and ligase fam... 27 2.9
At1g52670.1 68414.m05947 biotin/lipoyl attachment domain-contain... 27 2.9
At5g16720.1 68418.m01958 expressed protein contains Pfam profile... 27 3.9
At5g09790.1 68418.m01133 PHD finger family protein / SET domain-... 27 3.9
At1g65890.1 68414.m07477 acyl-activating enzyme 12 (AAE12) simil... 27 5.2
At5g54690.1 68418.m06811 glycosyl transferase family 8 protein c... 26 6.8
At2g31190.1 68415.m03809 expressed protein contains Pfam domain,... 26 6.8
At5g66620.1 68418.m08397 LIM domain-containing protein contains ... 26 9.0
At4g10770.1 68417.m01757 oligopeptide transporter OPT family pro... 26 9.0
At2g46420.1 68415.m05777 expressed protein 26 9.0
At1g66280.1 68414.m07527 glycosyl hydrolase family 1 protein con... 26 9.0
At1g47340.1 68414.m05241 F-box family protein contains F-box dom... 26 9.0
At1g04900.1 68414.m00487 expressed protein contains Pfam PF02636... 26 9.0
>At3g13930.1 68416.m01759 dihydrolipoamide S-acetyltransferase,
putative similar to dihydrolipoamide S-acetyltransferase
[Zea mays] GI:5669871; contains Pfam profiles PF00198:
2-oxo acid dehydrogenases acyltransferase (catalytic
domain), PF00364: Biotin-requiring enzyme, PF02817: e3
binding domain
Length = 539
Score = 120 bits (288), Expect = 4e-28
Identities = 56/110 (50%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Frame = +3
Query: 48 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYL 227
S LP H ++ +P+LSPTM G+I W KKEGDK++ G++LCE+ETDKAT+ E EEG+L
Sbjct: 106 SDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGFL 165
Query: 228 AKILIPAGTKGVPVGKLLCIIVGDQNDVAAFKDF--KDDSXPATPE-KPA 368
AKI+ G K + VG+++ I V D++D+ FKD+ D+ PA PE KPA
Sbjct: 166 AKIVKEEGAKEIQVGEVIAITVEDEDDIQKFKDYTPSSDTGPAAPEAKPA 215
>At3g52200.1 68416.m05733 dihydrolipoamide S-acetyltransferase,
putative similar to dihydrolipoamide acetyltransferase
(E2) subunit of PDC [Arabidopsis thaliana] GI:559395;
contains Pfam profiles PF00198: 2-oxo acid
dehydrogenases acyltransferase (catalytic domain),
PF00364: Biotin-requiring enzyme, PF02817: e3 binding
domain; supporting cDNA
gi|5881964|gb|AF066080.1|AF066080
Length = 637
Score = 116 bits (279), Expect = 5e-27
Identities = 54/92 (58%), Positives = 67/92 (72%)
Frame = +3
Query: 48 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYL 227
S LP H+ + +PALSPTM G+I W KKEGDK+ GD++ EIETDKAT+ FE+ EEGYL
Sbjct: 207 SDLPPHVVLEMPALSPTMNQGNIAKWWKKEGDKIEVGDVIGEIETDKATLEFESLEEGYL 266
Query: 228 AKILIPAGTKGVPVGKLLCIIVGDQNDVAAFK 323
AKILIP G+K V VGK + +IV D + A K
Sbjct: 267 AKILIPEGSKDVAVGKPIALIVEDAESIEAIK 298
Score = 105 bits (253), Expect = 7e-24
Identities = 45/78 (57%), Positives = 63/78 (80%)
Frame = +3
Query: 78 LPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTK 257
+PALSPTM G++V W KKEGDK+ GD+LCEIETDKAT+ FE+ EEG+LAKIL+ G+K
Sbjct: 90 MPALSPTMSHGNVVKWMKKEGDKVEVGDVLCEIETDKATVEFESQEEGFLAKILVTEGSK 149
Query: 258 GVPVGKLLCIIVGDQNDV 311
+PV + + I+V +++D+
Sbjct: 150 DIPVNEPIAIMVEEEDDI 167
>At1g54220.1 68414.m06182 dihydrolipoamide S-acetyltransferase,
putative similar to dihydrolipoamide S-acetyltransferase
GI:5669871 [Zea mays]; contains Pfam profiles PF00198:
2-oxo acid dehydrogenases acyltransferase (catalytic
domain), PF00364: Biotin-requiring enzyme, PF02817: e3
binding domain
Length = 539
Score = 115 bits (276), Expect = 1e-26
Identities = 53/106 (50%), Positives = 73/106 (68%), Gaps = 1/106 (0%)
Frame = +3
Query: 48 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYL 227
S LP H ++ +P+LSPTM G+I W KKEGDK++ G++LCE+ETDKAT+ E EEGYL
Sbjct: 106 SDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGYL 165
Query: 228 AKILIPAGTKGVPVGKLLCIIVGDQNDVAAFKDFKDDS-XPATPEK 362
AKI+ G+K + VG+++ I V D+ D+ FKD+ S A P K
Sbjct: 166 AKIVKAEGSKEIQVGEVIAITVEDEEDIGKFKDYTPSSTADAAPTK 211
>At1g34430.1 68414.m04277 dihydrolipoamide S-acetyltransferase,
putative similar to dihydrolipoamide S-acetyltransferase
(LTA2) [Arabidopsis thaliana] GI:5881963; contains Pfam
profiles PF00198: 2-oxo acid dehydrogenases
acyltransferase (catalytic domain), PF00364:
Biotin-requiring enzyme, PF02817: e3 binding domain
Length = 465
Score = 75.4 bits (177), Expect = 1e-14
Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +3
Query: 69 KVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPA 248
++ +PALS TM G IVSW K EGDKL++G+ + +E+DKA M ET +GYLA I++
Sbjct: 41 EIFMPALSSTMTEGKIVSWVKSEGDKLNKGESVVVVESDKADMDVETFYDGYLAAIMVEE 100
Query: 249 GTKGV-PVGKLLCIIVGDQNDVAAFK 323
G GV PVG + ++ ++++A K
Sbjct: 101 G--GVAPVGSAIALLAETEDEIADAK 124
>At3g25860.1 68416.m03222 dihydrolipoamide S-acetyltransferase
(LTA2) identical to dihydrolipoamide S-acetyltransferase
(LTA2) [Arabidopsis thaliana] GI:5881963
Length = 480
Score = 68.5 bits (160), Expect = 1e-12
Identities = 34/85 (40%), Positives = 54/85 (63%)
Frame = +3
Query: 69 KVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPA 248
++ +PALS TM G IVSW K EG+KL++G+ + +E+DKA M ET +GYLA I++
Sbjct: 57 EIFMPALSSTMTEGKIVSWIKTEGEKLAKGESVVVVESDKADMDVETFYDGYLAAIVVGE 116
Query: 249 GTKGVPVGKLLCIIVGDQNDVAAFK 323
G + PVG + ++ + ++ K
Sbjct: 117 G-ETAPVGAAIGLLAETEAEIEEAK 140
>At5g55070.1 68418.m06864 2-oxoacid dehydrogenase family protein
similar to SP|Q01205 Dihydrolipoamide
succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor (EC
2.3.1.61) {Rattus norvegicus}; contains Pfam profiles
PF00198: 2-oxo acid dehydrogenases acyltransferase
(catalytic domain), PF00364: Biotin-requiring enzyme
Length = 464
Score = 45.2 bits (102), Expect = 1e-05
Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Frame = +3
Query: 3 TVLSTPQWTVQMRYYSSLPSH----IKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLC 170
T+++ Q T R+ S ++ +P + ++ G++ ++ KK GD++ + +
Sbjct: 69 TIINGYQGTALQRWVRPFSSDSGDVVEAVVPHMGESITDGTLAAFLKKPGDRVEADEAIA 128
Query: 171 EIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKL 278
+IETDK T+ +P G + + L+ G P K+
Sbjct: 129 QIETDKVTIDIASPASGVIQEFLVKEGDTVEPGNKV 164
Score = 26.2 bits (55), Expect = 6.8
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +3
Query: 69 KVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEE 218
KV + SP SG I + KEGD + G+ + I T + P E
Sbjct: 134 KVTIDIASPA--SGVIQEFLVKEGDTVEPGNKVARISTSADAVSHVAPSE 181
>At3g06850.2 68416.m00813 branched chain alpha-keto acid
dehydrogenase E2 subunit (din3) identical to branched
chain alpha-keto acid dehydrogenase E2 subunit (din3)
[Arabidopsis thaliana] GI:7021284
Length = 483
Score = 37.9 bits (84), Expect = 0.002
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +3
Query: 114 IVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGK-LLCII 290
++ W KEGD + E LCE+++DKAT+ + +G +A I G + VG+ L+ +
Sbjct: 92 LLKWFVKEGDSVEEFQPLCEVQSDKATIEITSRFKGKVALISHSPGDI-IKVGETLVRLA 150
Query: 291 VGDQND 308
V D D
Sbjct: 151 VEDSQD 156
>At3g06850.1 68416.m00812 branched chain alpha-keto acid
dehydrogenase E2 subunit (din3) identical to branched
chain alpha-keto acid dehydrogenase E2 subunit (din3)
[Arabidopsis thaliana] GI:7021284
Length = 483
Score = 37.9 bits (84), Expect = 0.002
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +3
Query: 114 IVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGK-LLCII 290
++ W KEGD + E LCE+++DKAT+ + +G +A I G + VG+ L+ +
Sbjct: 92 LLKWFVKEGDSVEEFQPLCEVQSDKATIEITSRFKGKVALISHSPGDI-IKVGETLVRLA 150
Query: 291 VGDQND 308
V D D
Sbjct: 151 VEDSQD 156
>At5g15530.1 68418.m01818 biotin carboxyl carrier protein 2 (BCCP2)
identical to biotin carboxyl carrier protein isoform 2
[Arabidopsis thaliana] gi|8886869|gb|AAF80592
Length = 255
Score = 29.9 bits (64), Expect = 0.55
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 132 KEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCII 290
K GDK+ +G ++C IE K E + G + ++L G K V V L +I
Sbjct: 202 KVGDKVQKGQIVCIIEAMKLMNEIEAEKSGTIMELLAEDG-KPVSVDTPLFVI 253
>At3g15690.1 68416.m01988 biotin carboxyl carrier protein of
acetyl-CoA carboxylase-related contains weak similarity
to Biotin carboxyl carrier protein of acetyl-CoA
carboxylase, chloroplast precursor (BCCP)
(Swiss-Prot:Q42533) [Arabidopsis thaliana]
Length = 247
Score = 29.1 bits (62), Expect = 0.97
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 132 KEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTK 257
KE D++ EG +LC IE E+ G + KIL G K
Sbjct: 201 KEKDQVKEGQILCYIEQLGGQFPIESDVTGEVVKILREDGGK 242
>At5g57550.1 68418.m07190 xyloglucan:xyloglucosyl transferase /
xyloglucan endotransglycosylase / endo-xyloglucan
transferase (XTR3) identical to endoxyloglucan
transferase GI:5533317 from [Arabidopsis thaliana]
Length = 284
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = +3
Query: 81 PALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKAT-MGFETPEEGYLAKI-----LI 242
P + T ++ ++W G L+ G+LL + D+A+ GF+T +E KI L+
Sbjct: 24 PVFAGTFDTEFDITWGDGRGKVLNNGELL-TLSLDRASGSGFQTKKEYLFGKIDMQLKLV 82
Query: 243 PAGTKG 260
P + G
Sbjct: 83 PGNSAG 88
>At5g23110.1 68418.m02703 zinc finger (C3HC4-type RING finger) family
protein contains Pfam profile: PF00097 zinc finger, C3HC4
type (RING finger)
Length = 4706
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 66 IKVNLPALSPTMESGSIVSWEKKEGDKLSEG 158
++V L L P + G IV+W+ K+GDKL G
Sbjct: 4475 VQVQLHPLRPFYK-GEIVAWKIKQGDKLRYG 4504
>At3g15690.2 68416.m01989 biotin carboxyl carrier protein of
acetyl-CoA carboxylase-related contains weak similarity
to Biotin carboxyl carrier protein of acetyl-CoA
carboxylase, chloroplast precursor (BCCP)
(Swiss-Prot:Q42533) [Arabidopsis thaliana]
Length = 263
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +3
Query: 132 KEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVG 272
KE D++ EG +LC IE E+ G + KIL G PVG
Sbjct: 201 KEKDQVKEGQILCYIEQLGGQFPIESDVTGEVVKIL---REDGEPVG 244
>At1g66270.2 68414.m07524 beta-glucosidase (PSR3.2) nearly identical
to GI:2286069 from (Arabidopsis thaliana) (Plant Mol.
Biol. 34 (1), 57-68 (1997)); similar to thioglucoside
glucohydrolase (GI:984052) [Arabidopsis thaliana]
Length = 522
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 30 VQMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDL 164
V + YY+S S+ P+ + S+VSWE K D + G +
Sbjct: 339 VGLNYYTSTFSNYNEKPDPSKPSWKQDSLVSWEPKNVDHSAIGSM 383
>At1g66270.1 68414.m07523 beta-glucosidase (PSR3.2) nearly identical
to GI:2286069 from (Arabidopsis thaliana) (Plant Mol.
Biol. 34 (1), 57-68 (1997)); similar to thioglucoside
glucohydrolase (GI:984052) [Arabidopsis thaliana]
Length = 524
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 30 VQMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDL 164
V + YY+S S+ P+ + S+VSWE K D + G +
Sbjct: 341 VGLNYYTSTFSNYNEKPDPSKPSWKQDSLVSWEPKNVDHSAIGSM 385
>At1g68270.1 68414.m07798 AMP-dependent synthetase and ligase family
protein similar to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501
Length = 535
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = -3
Query: 275 FPDRHSLCTGRNQYFGQVTFFRCLKAHSCFVSFNLAQKIAFTKFVP 138
+P+R S+ G+ ++ T+ RC + + +S N+A+ + P
Sbjct: 27 YPNRTSIIYGQTRFTWPQTYDRCCRLAASLISLNIAKNDVVSVVAP 72
>At5g63530.1 68418.m07974 copper chaperone (CCH)-related low
similarity to copper homeostasis factor [GI:3168840];
nearly identical to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 355
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 321 KDFKDDSXPATPEKPA 368
KD K+DS PA PE PA
Sbjct: 52 KDSKEDSAPAAPEAPA 67
>At5g16390.1 68418.m01915 biotin carboxyl carrier protein 1 (BCCP1)
identical to biotin carboxyl carrier protein of
acetyl-CoA carboxylase precursor [Arabidopsis thaliana]
gi|9759121|dbj|BAB09606
Length = 280
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 132 KEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAG 251
K GDK+ +G +LC +E K E+ G + I+ G
Sbjct: 227 KVGDKVQKGQVLCIVEAMKLMNEIESDHTGTVVDIVAEDG 266
>At1g65880.1 68414.m07476 AMP-dependent synthetase and ligase family
protein similar to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501
Length = 580
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/46 (21%), Positives = 24/46 (52%)
Frame = -3
Query: 275 FPDRHSLCTGRNQYFGQVTFFRCLKAHSCFVSFNLAQKIAFTKFVP 138
+P+R S+ G+ ++ T+ RC + + +S N+++ + P
Sbjct: 27 YPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLNISKNDVVSVMAP 72
>At1g52670.1 68414.m05947 biotin/lipoyl attachment domain-containing
protein similar to SP|Q06881 Biotin carboxyl carrier
protein of acetyl-CoA carboxylase (BCCP) {Anabaena sp.};
contains Pfam profile PF00364: Biotin-requiring enzyme
Length = 274
Score = 27.5 bits (58), Expect = 2.9
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +3
Query: 132 KEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVG 272
KE D + EG +LC IE + E+ G + KIL G PVG
Sbjct: 212 KEKDIVKEGQVLCYIEQLGGQIPVESDVSGEIVKIL---REDGEPVG 255
>At5g16720.1 68418.m01958 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 675
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 123 WEKKEGDKLSEGDLLCEIETDKATMGFETPEEGY 224
W K GD+ G +L I+ DK GFE E Y
Sbjct: 149 WGKTLGDREDGGLILEMIDDDKFGDGFEIDRESY 182
>At5g09790.1 68418.m01133 PHD finger family protein / SET
domain-containing protein contains Pfam domain, PF00628:
PHD-finger and PF00856: SET domain
Length = 352
Score = 27.1 bits (57), Expect = 3.9
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +3
Query: 78 LPALSPTMESGSIVSWEKKEGDKLSEGDLLCEI----ETDKATMGFETPEEGYLAKILIP 245
+ +++ M V +++E D+ S ++ CE E D + + + G+ K L P
Sbjct: 37 MKSMAEIMAKSVPVVEQEEEEDEDSYSNVTCEKCGSGEGDDELLLCDKCDRGFHMKCLRP 96
Query: 246 AGTKGVPVGKLLCIIVGDQNDV 311
+ VP+G LC+ DQ V
Sbjct: 97 IVVR-VPIGTWLCVDCSDQRPV 117
>At1g65890.1 68414.m07477 acyl-activating enzyme 12 (AAE12) similar
to AMP-binding protein GI:1903034 from [Brassica napus];
contains Pfam AMP-binding domain PF00501; identical to
cDNA acyl-activating enzyme 12 (At1g65890) mRNA
GI:29893228, acyl-activating enzyme 12 [Arabidopsis
thaliana] GI:29893229
Length = 578
Score = 26.6 bits (56), Expect = 5.2
Identities = 10/46 (21%), Positives = 23/46 (50%)
Frame = -3
Query: 275 FPDRHSLCTGRNQYFGQVTFFRCLKAHSCFVSFNLAQKIAFTKFVP 138
+P+R S+ G+ ++ T+ RC + + +S N+ + + P
Sbjct: 27 YPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLNIGKNDVVSVVAP 72
>At5g54690.1 68418.m06811 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 535
Score = 26.2 bits (55), Expect = 6.8
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +3
Query: 45 YSSLPSHIKVNLPALSPTM 101
Y+SL +HI+++LP L P++
Sbjct: 327 YNSLMNHIRIHLPELFPSL 345
>At2g31190.1 68415.m03809 expressed protein contains Pfam domain,
PF04884: Protein of unknown function, DUF647
Length = 433
Score = 26.2 bits (55), Expect = 6.8
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = +3
Query: 87 LSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVP 266
L PT ++VSW K+G + G L+C A M E LA +L GT G+
Sbjct: 115 LRPTPAQATVVSWILKDGMQ-HVGKLIC--SNLGARMDSEPKRWRILADVLYDLGT-GLE 170
Query: 267 VGKLLC 284
+ LC
Sbjct: 171 LVSPLC 176
>At5g66620.1 68418.m08397 LIM domain-containing protein contains
Pfam profile PF00412: LIM domain
Length = 644
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 2 DSSIYTTMDCSDEVLFESTITYKGQPSSSFANHGEW 109
DS Y T D + + ++ + + P++S + GEW
Sbjct: 559 DSQTYATADATADASSSASSSSRTPPAASASKKGEW 594
>At4g10770.1 68417.m01757 oligopeptide transporter OPT family
protein similar to oligopeptide transporter Opt1p
[Candida albicans] GI:2367386; contains Pfam profile
PF03169: OPT oligopeptide transporter protein
Length = 766
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 255 LYRPESIFWPGNLLQVS 205
L P +++WP NL+QVS
Sbjct: 209 LVEPAAMWWPANLVQVS 225
>At2g46420.1 68415.m05777 expressed protein
Length = 363
Score = 25.8 bits (54), Expect = 9.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 69 KVNLPALSPTMESGSIVSWEKKEGDKLSEGDL 164
KVNL +P +SGS VS +G K+S D+
Sbjct: 22 KVNLSVEAPIQDSGS-VSASSNDGRKVSRQDI 52
>At1g66280.1 68414.m07527 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to beta-glucosidase 1 (GI:12043529) [Arabidopsis
thaliana]
Length = 524
Score = 25.8 bits (54), Expect = 9.0
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 30 VQMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEG 158
V + YY+S S+ +P+ + S+V+WE K D + G
Sbjct: 341 VGLNYYTSTFSNHNEKPDPSTPSWKQDSLVAWEPKNVDHSAIG 383
>At1g47340.1 68414.m05241 F-box family protein contains F-box domain
Pfam:PF00646
Length = 459
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +1
Query: 190 QLWALRHLKKVTWPKY*FRPVQRECLSGNYCALL 291
+LW L +K+ W KY ++ ++ E S +Y +++
Sbjct: 310 RLWVLEDKEKIEWSKYAYK-LKDEKFSAHYVSIV 342
>At1g04900.1 68414.m00487 expressed protein contains Pfam PF02636:
Uncharacterized ACR, COG1565
Length = 442
Score = 25.8 bits (54), Expect = 9.0
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 18 PQWTVQMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSE 155
P W + + +LP + + LSP ME ++ K E + LSE
Sbjct: 210 PCWVIMLEVLDNLPHDLVYSKSQLSPWME---VLVENKPESEALSE 252
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,022,763
Number of Sequences: 28952
Number of extensions: 155988
Number of successful extensions: 524
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 487896136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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