Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30202
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    26   0.24 
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   1.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   1.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   1.7  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   6.9  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   9.2  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 489 FASETVIRLLLIFPLFNGCY*SETSLSALEKKYRH 593
           F  + +I+ + ++PLF     S   L  L +KYRH
Sbjct: 146 FTKQLLIKFVEVYPLFVLLIVSNVVLKILVEKYRH 180


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/34 (23%), Positives = 23/34 (67%)
 Frame = -1

Query: 526 KINNKRITVSEAKRERLASFR*ISENKCRICMLC 425
           ++ ++  ++SE+K +  ++++ + E+  R+C LC
Sbjct: 247 QVTDRTQSMSESKNKSESAWKNLREDYNRLCRLC 280


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/34 (23%), Positives = 23/34 (67%)
 Frame = -1

Query: 526 KINNKRITVSEAKRERLASFR*ISENKCRICMLC 425
           ++ ++  ++SE+K +  ++++ + E+  R+C LC
Sbjct: 247 QVTDRTQSMSESKNKSESAWKNLREDYNRLCRLC 280


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/34 (23%), Positives = 23/34 (67%)
 Frame = -1

Query: 526 KINNKRITVSEAKRERLASFR*ISENKCRICMLC 425
           ++ ++  ++SE+K +  ++++ + E+  R+C LC
Sbjct: 247 QVTDRTQSMSESKNKSESAWKNLREDYNRLCRLC 280


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 182 KNESSEMSVIRNDHWVAIK 126
           KN+  E++V+  + WV +K
Sbjct: 391 KNQKGEVTVLEIEDWVLLK 409


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +3

Query: 609 RHFFSVTRHLFITYI 653
           ++FFS+TR L ++++
Sbjct: 381 KNFFSITRGLILSFV 395


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 197 FSFVIILLKRQFTFYLLIAIKLV 265
           F F+++LL    T  LLI I+++
Sbjct: 212 FGFLVLLLVALTTLQLLIYIQVI 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,025
Number of Sequences: 336
Number of extensions: 3120
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)