Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30199
         (639 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IR23 Cluster: CG9209-PA, isoform A; n=6; Endopterygot...    69   1e-10
UniRef50_UPI00015B62FA Cluster: PREDICTED: similar to ras gtpase...    56   7e-07
UniRef50_UPI0000E49CFC Cluster: PREDICTED: similar to Ras GTPase...    50   6e-05
UniRef50_P20936 Cluster: Ras GTPase-activating protein 1; n=50; ...    49   1e-04
UniRef50_Q4RUN4 Cluster: Chromosome 12 SCAF14993, whole genome s...    40   0.067
UniRef50_Q0PIN0 Cluster: Bam32; n=1; Branchiostoma belcheri tsin...    35   1.9  
UniRef50_Q4RP74 Cluster: Chromosome 1 SCAF15008, whole genome sh...    34   3.3  
UniRef50_UPI00006CF1BE Cluster: hypothetical protein TTHERM_0053...    33   5.8  
UniRef50_A5FJ90 Cluster: Surface antigen (D15) precursor; n=3; F...    33   5.8  
UniRef50_Q2MD52 Cluster: B-cell linker protein; n=7; Theria|Rep:...    33   7.7  
UniRef50_Q8WV28 Cluster: B-cell linker protein; n=24; Eutheria|R...    33   7.7  

>UniRef50_Q8IR23 Cluster: CG9209-PA, isoform A; n=6;
           Endopterygota|Rep: CG9209-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 954

 Score = 68.5 bits (160), Expect = 1e-10
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = +3

Query: 444 NGERQAVLAPPETEWYHGRLDRYTSEERLWAASKQGSYL 560
           NGER A++APPE+EWYHGRLDRY++E RL  +SK GSYL
Sbjct: 70  NGERPAIIAPPESEWYHGRLDRYSAESRLRGSSKLGSYL 108


>UniRef50_UPI00015B62FA Cluster: PREDICTED: similar to ras gtpase
           activating protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ras gtpase activating protein -
           Nasonia vitripennis
          Length = 879

 Score = 56.0 bits (129), Expect = 7e-07
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = +3

Query: 468 APPETEWYHGRLDRYTSEERLWAASKQGSYL 560
           APPE +WYHGRLDR+T+EERL  AS+ GSYL
Sbjct: 71  APPENQWYHGRLDRFTAEERLRDASRLGSYL 101


>UniRef50_UPI0000E49CFC Cluster: PREDICTED: similar to Ras
           GTPase-activating protein 1 (GTPase-activating protein)
           (GAP) (Ras p21 protein activator) (p120GAP) (RasGAP);
           n=3; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to Ras GTPase-activating protein 1
           (GTPase-activating protein) (GAP) (Ras p21 protein
           activator) (p120GAP) (RasGAP) - Strongylocentrotus
           purpuratus
          Length = 628

 Score = 49.6 bits (113), Expect = 6e-05
 Identities = 22/31 (70%), Positives = 24/31 (77%)
 Frame = +3

Query: 468 APPETEWYHGRLDRYTSEERLWAASKQGSYL 560
           APPE EWYHG LDR ++E RL AA K GSYL
Sbjct: 62  APPENEWYHGCLDRQSAELRLNAADKPGSYL 92


>UniRef50_P20936 Cluster: Ras GTPase-activating protein 1; n=50;
           Euteleostomi|Rep: Ras GTPase-activating protein 1 - Homo
           sapiens (Human)
          Length = 1047

 Score = 48.8 bits (111), Expect = 1e-04
 Identities = 20/31 (64%), Positives = 23/31 (74%)
 Frame = +3

Query: 468 APPETEWYHGRLDRYTSEERLWAASKQGSYL 560
           APP  +WYHG+LDR  +EERL  A K GSYL
Sbjct: 175 APPTNQWYHGKLDRTIAEERLRQAGKSGSYL 205


>UniRef50_Q4RUN4 Cluster: Chromosome 12 SCAF14993, whole genome
           shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
           Chromosome 12 SCAF14993, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 1136

 Score = 39.5 bits (88), Expect = 0.067
 Identities = 18/32 (56%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +3

Query: 468 APPET-EWYHGRLDRYTSEERLWAASKQGSYL 560
           +PP    WYHG+LDR  +EERL  A   GSYL
Sbjct: 178 SPPRMPRWYHGKLDRTIAEERLRQARNPGSYL 209


>UniRef50_Q0PIN0 Cluster: Bam32; n=1; Branchiostoma belcheri
           tsingtauense|Rep: Bam32 - Branchiostoma belcheri
           tsingtauense
          Length = 250

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +3

Query: 477 ETEWYHGRLDRYTSEERLWAASKQGSYLGKS 569
           + +WYHG L R+ +E  L A ++ GSYL +S
Sbjct: 11  QLDWYHGDLSRHMAEALLMANAEDGSYLLRS 41


>UniRef50_Q4RP74 Cluster: Chromosome 1 SCAF15008, whole genome
           shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 1
           SCAF15008, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 968

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 447 GERQAVLAPPETEWYHGRLDRYTSEERLWAASKQGSYL 560
           G R  + A     WYH  + R  +EE L  A K GSYL
Sbjct: 1   GPRSTLTAMATAVWYHRDISRVQAEELLARAGKDGSYL 38


>UniRef50_UPI00006CF1BE Cluster: hypothetical protein TTHERM_00538500;
            n=12; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00538500 - Tetrahymena thermophila SB210
          Length = 2413

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +2

Query: 98   KFKEDLNNTEYILIFGIL*VCTTRFIFLVNKKNIPFLNNESLVC 229
            +F +  NNT Y++   I  + TT+ I L+NKKN+  +    + C
Sbjct: 1312 QFSDRCNNTIYLINEDIFVLATTKQINLINKKNLELIQKIQVEC 1355


>UniRef50_A5FJ90 Cluster: Surface antigen (D15) precursor; n=3;
           Flavobacteriales|Rep: Surface antigen (D15) precursor -
           Flavobacterium johnsoniae UW101
          Length = 900

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
 Frame = -1

Query: 303 LNQPFLRQTKNHIQNQ-----FSNSRISFTHTSDSLFRNGIFFLFTRKINLVVQT*RIPK 139
           +N+  +  TKN+I+N+     F N+++  T T D+   N        ++N++V+  +  K
Sbjct: 141 VNENLITTTKNYIENKYKKDGFYNTKVVITTTPDTTAGN--------QVNMLVRVDKGDK 192

Query: 138 IKIYSVLFRSSLNLSLSYFRAYYIKLHQK 52
           +KI S+ F  +  LS S  RA      QK
Sbjct: 193 VKISSIDFTGNKQLSDSKLRAAMKDTKQK 221


>UniRef50_Q2MD52 Cluster: B-cell linker protein; n=7; Theria|Rep:
           B-cell linker protein - Homo sapiens (Human)
          Length = 433

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +3

Query: 438 STNGERQA-VLAPPETEWYHGRLDRYTSEERLWAASKQGSYL 560
           ST  E++A VL  P   WY G  DR ++EE L  ++K GS+L
Sbjct: 309 STISEQEAGVLCKP---WYAGACDRKSAEEALHRSNKDGSFL 347


>UniRef50_Q8WV28 Cluster: B-cell linker protein; n=24; Eutheria|Rep:
           B-cell linker protein - Homo sapiens (Human)
          Length = 456

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +3

Query: 438 STNGERQA-VLAPPETEWYHGRLDRYTSEERLWAASKQGSYL 560
           ST  E++A VL  P   WY G  DR ++EE L  ++K GS+L
Sbjct: 332 STISEQEAGVLCKP---WYAGACDRKSAEEALHRSNKDGSFL 370


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,834,777
Number of Sequences: 1657284
Number of extensions: 10425352
Number of successful extensions: 23487
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 22934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23486
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)