Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30198
(583 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0637 + 4767021-4767083,4767175-4767249,4767339-4767500,476... 153 1e-37
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 64 8e-11
02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128... 63 1e-10
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 62 3e-10
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 62 4e-10
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 54 8e-08
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 53 1e-07
07_03_1752 - 29218348-29218524,29218593-29218736,29218957-292191... 51 6e-07
07_03_1755 - 29235650-29235754,29236432-29236525,29236710-292368... 48 5e-06
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 46 2e-05
04_04_0161 + 23203786-23203848,23204141-23204180,23204865-232050... 29 2.7
12_01_1069 - 11060045-11060262,11060404-11060545,11060624-110607... 29 3.6
04_03_0351 - 14761728-14763086,14764742-14764957 29 3.6
03_05_0882 + 28467691-28467730,28468386-28468675,28469262-284694... 27 8.2
>07_01_0637 +
4767021-4767083,4767175-4767249,4767339-4767500,
4767624-4767702,4767922-4768076,4768225-4768288,
4768928-4769007,4769366-4769431,4769932-4769982,
4770087-4770238,4770270-4770287,4770323-4770413,
4771156-4771236,4771330-4771407,4772315-4772350,
4772425-4772468,4772567-4772645,4773035-4773125,
4773268-4773374
Length = 523
Score = 153 bits (370), Expect = 1e-37
Identities = 69/159 (43%), Positives = 100/159 (62%)
Frame = +2
Query: 104 SSSAPTTKLYIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTW 283
+SS P +L I G++V+SR +++TNPAT EV+ R+P T DE +A+DAA+ A+ W
Sbjct: 18 ASSPPRVRLLIGGEFVESRADEHVDVTNPATQEVVSRIPLTTADEFRAAVDAARTAFPGW 77
Query: 284 SKSTVLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQSVEHCCSITS 463
+ V TRQ++M K+ L+R N KLA IT EQGKT+ DA GDV RG++ VEH C + +
Sbjct: 78 RNTPVTTRQRIMLKYQELIRANMDKLAENITTEQGKTLKDAWGDVFRGLEVVEHACGMGT 137
Query: 464 LQLGDSIQNIAKDMDTHSYKVPLXXXXXXAALQFPGDDP 580
LQ+G+ + N++ +DT S + PL FP P
Sbjct: 138 LQMGEYVSNVSNGIDTFSIREPLGVCAGICPFNFPAMIP 176
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 64.1 bits (149), Expect = 8e-11
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Frame = +2
Query: 122 TKLYIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYK--TWSKST 295
T+L IDG++VDS + +P T E+I V E +++ A+ AA++A+ W K T
Sbjct: 69 TQLLIDGKFVDSASGKTFPTLDPRTGELIAHVAEGDAEDINRAVHAARKAFDEGPWPKMT 128
Query: 296 VLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADA 406
R +++ +FA L+ ++ ++AA T + GK A A
Sbjct: 129 AYERSRILLRFADLIEKHNDEIAALETWDNGKPYAQA 165
>02_05_0620 -
30412004-30412429,30412509-30412646,30412729-30412866,
30412966-30413139,30413211-30413684,30413775-30413917,
30414002-30414160,30414943-30415042
Length = 583
Score = 63.3 bits (147), Expect = 1e-10
Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Frame = +2
Query: 122 TKLYIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYK--TWSKST 295
TKL I+G +VD+ + +P T +VI RV E +++ A+ AA+RA+ W + T
Sbjct: 73 TKLLINGNFVDAASGKTFATVDPRTGDVIARVAEGDAEDVNRAVAAARRAFDEGPWPRMT 132
Query: 296 VLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEG 412
R +++ +FA L+ ++ ++AA T + GKT+ G
Sbjct: 133 AYERCRVLLRFADLIEQHADEIAALETWDGGKTLEQTTG 171
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/100 (30%), Positives = 56/100 (56%)
Frame = +2
Query: 125 KLYIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLT 304
+ Y DG++ S + + + NP T RV TQ+E+ ++ AK A K W+++ +
Sbjct: 20 RYYADGEWRVSASGKSVAIVNPTTRLTQYRVQACTQEEVNKVMETAKVAQKAWARTPLWK 79
Query: 305 RQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLR 424
R +L+ K A +L+E+++ +A + +E K DA +V+R
Sbjct: 80 RAELLHKAAAILKEHKTPIAECLVKEIAKPAKDAISEVVR 119
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 61.7 bits (143), Expect = 4e-10
Identities = 38/152 (25%), Positives = 79/152 (51%), Gaps = 3/152 (1%)
Frame = +2
Query: 122 TKLYIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYK--TWSKST 295
TKL+I+G++VD+ + E +P T +VI RV E ++++ A+ AA+ A+ W + +
Sbjct: 46 TKLFINGRFVDAASGKTFETRDPRTGDVIARVAEGDKEDVDLAVKAAREAFDHGEWPRMS 105
Query: 296 VLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEG-DVLRGIQSVEHCCSITSLQL 472
R ++M K+A ++ + +LAA + + GK +A A DV + + +
Sbjct: 106 GSERGRVMAKYAEVVERHADELAALESLDAGKPLAAARAVDVGECVGILRYFAGAADKIH 165
Query: 473 GDSIQNIAKDMDTHSYKVPLXXXXXXAALQFP 568
G++++ +++ + ++ + PL FP
Sbjct: 166 GETLK-MSRQLQGYTLREPLGVAGLIVPWNFP 196
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 54.0 bits (124), Expect = 8e-08
Identities = 27/94 (28%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Frame = +2
Query: 122 TKLYIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYK--TWSKST 295
TKL+I+G++VD+ + + +P T +V+ + EA + ++ A+ AA+ A++ W + +
Sbjct: 27 TKLFINGEFVDAASGKTFKTRDPRTGDVLAHIAEADKADVDLAVKAAREAFEHGKWPRMS 86
Query: 296 VLTRQQLMFKFARLLRENQSKLAAKITEEQGKTI 397
R ++M K A L+ ++ +LAA + GK +
Sbjct: 87 GYERSRVMNKLADLVEQHADELAALDGADAGKLL 120
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 53.2 bits (122), Expect = 1e-07
Identities = 35/128 (27%), Positives = 55/128 (42%)
Frame = +2
Query: 185 NPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLA 364
NPAT E + V E + A+ +A + +WSK T R + + K+ L+ ++ +LA
Sbjct: 103 NPATGETLANVSCMGSKETSDAIASAHSTFYSWSKLTANERSKALRKWHDLIISHKEELA 162
Query: 365 AKITEEQGKTIADAEGDVLRGIQSVEHCCSITSLQLGDSIQNIAKDMDTHSYKVPLXXXX 544
+T EQGK + +A +V G +E+ GD I D K P+
Sbjct: 163 LLMTLEQGKPMKEALVEVTYGASFIEYFAEEAKRIYGDIIPPTLSDRRLLVLKQPVGVVG 222
Query: 545 XXAALQFP 568
FP
Sbjct: 223 AVTPWNFP 230
>07_03_1752 -
29218348-29218524,29218593-29218736,29218957-29219148,
29219225-29219440,29219873-29220010,29220137-29220232,
29221204-29221357,29221976-29222098,29222291-29222418,
29222669-29222773,29223396-29223437,29223631-29223746,
29223805-29223916
Length = 580
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +2
Query: 164 TNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLR 343
T+ ++ PAT + +G P T DE+ + A++A K W+KS+ R+Q + + +
Sbjct: 101 TDKVQCYEPATMKYLGYFPALTPDEVKEHVAQARKAQKIWAKSSFKQRRQFLRILLKYIL 160
Query: 344 ENQSKLAAKITEEQGKTIADAE-GDVLRGIQSV 439
E+Q + + + GKT+ DA G+++ + +
Sbjct: 161 EHQDLICEISSRDTGKTMVDASLGEIMTTCEKI 193
>07_03_1755 -
29235650-29235754,29236432-29236525,29236710-29236837,
29237077-29237181,29237706-29237773,29237926-29238037
Length = 203
Score = 48.0 bits (109), Expect = 5e-06
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +2
Query: 164 TNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLR 343
T+ ++ PAT + +G P T DE+ + A++A K W+KS+ R Q + + +
Sbjct: 71 TDKVQCYEPATMKYLGYFPALTPDEVKEHVAQARKAQKIWAKSSSKQRCQFLRILLKYIL 130
Query: 344 ENQSKLAAKITEEQGKTIADAE-GDVL 421
E+Q + + GKT+ DA G+++
Sbjct: 131 EHQDLICEISPRDTGKTMVDASLGEIM 157
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/134 (23%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Frame = +2
Query: 176 ELTNPATNEVIGRVPEATQDELTSALDAAKRAYK--TWSKSTVLTRQQLMFKFARLLREN 349
E +P T EVI ++ E + ++ A+ AA+ A+ W + + R +++ KFA L+ ++
Sbjct: 37 ETRDPRTGEVIAKIAEGDKADIDLAVKAAREAFDHGPWPRMSGFARGRILHKFADLVEQH 96
Query: 350 QSKLAAKITEEQGKTIADAE-GDVLRGIQSVEHCCSITSLQLGDSIQNIAKDMDTHSYKV 526
+LAA T + GK A + D+ G + + G++++ +A+ ++ K
Sbjct: 97 VEELAALDTVDAGKLFAMGKLVDIPGGANLLRYYAGAADKVHGETLK-MARPCHGYTLKE 155
Query: 527 PLXXXXXXAALQFP 568
P+ +P
Sbjct: 156 PVGVVGHIVPWNYP 169
>04_04_0161 +
23203786-23203848,23204141-23204180,23204865-23205016,
23205270-23205406,23206356-23206396,23206500-23207098,
23207599-23207679,23208146-23208208,23209141-23209197
Length = 410
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 179 LTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWS 286
L P T+ + R+P A + LD+++ AY +WS
Sbjct: 221 LPEPRTSALPSRIPSARSMDDLLKLDSSREAYSSWS 256
>12_01_1069 -
11060045-11060262,11060404-11060545,11060624-11060776,
11060942-11061013,11062774-11063082,11063323-11063378,
11066436-11066533,11066616-11066700,11066800-11067001,
11067471-11067542,11069555-11069624,11071829-11072038,
11072337-11072609,11073912-11074183,11075354-11075557
Length = 811
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 210 PITSLVA-GLVSSIQLVVLESTYCPSIYSFVVGAELLYE 97
P+T L G + +LV L S++CP + S+ VG L+Y+
Sbjct: 611 PLTRLPKEGDLIVYRLVELSSSWCPELSSYRVGKVLIYD 649
>04_03_0351 - 14761728-14763086,14764742-14764957
Length = 524
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 209 GRVPEATQDELTSALDAAKRAYKTWSKSTVL--TRQQLMFKFARLLRE 346
G P+A ++E+ LD+ KRA+K W + R+Q +++ A L E
Sbjct: 29 GSTPQAVREEVDGFLDSRKRAFK-WEVGVCVRRLRKQALYRPALKLSE 75
>03_05_0882 +
28467691-28467730,28468386-28468675,28469262-28469411,
28470126-28470214,28470331-28470440,28470545-28470639,
28471110-28471162,28471374-28471539,28471909-28472001,
28472304-28472432,28472549-28472668,28472862-28472942,
28473495-28473602,28473895-28474038,28474120-28474218,
28474300-28474379,28474830-28474922,28475197-28475320
Length = 687
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 329 ARLLRENQSKLAAKIT--EEQGKTIADAEGDVLRGIQSVEHCCSI 457
+ LL E + K+A EEQ K I E D+L+G S + S+
Sbjct: 412 SNLLEEAEKKIAELTAKAEEQQKLILKLEDDILKGYSSTDRRTSL 456
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,901,984
Number of Sequences: 37544
Number of extensions: 289893
Number of successful extensions: 850
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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