Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30198
(583 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14) 64 1e-10
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 58 4e-09
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 57 1e-08
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_18188| Best HMM Match : SRP54 (HMM E-Value=0) 55 4e-08
SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 51 8e-07
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 48 7e-06
SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 31 0.91
SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05) 31 0.91
SB_54535| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_19612| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_58730| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_891| Best HMM Match : DUF1098 (HMM E-Value=0.47) 29 3.7
SB_27725| Best HMM Match : RVT_1 (HMM E-Value=1.9e-19) 28 6.4
SB_17852| Best HMM Match : MFS_1 (HMM E-Value=0.00068) 28 6.4
SB_22517| Best HMM Match : UPF0081 (HMM E-Value=1) 27 8.5
>SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14)
Length = 266
Score = 63.7 bits (148), Expect = 1e-10
Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 3/121 (2%)
Frame = +2
Query: 134 IDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAY--KTWSKSTVLTR 307
I Q+ D+ I++ NPAT EVI RVP A Q E+ A+ AA++A+ WS+ + R
Sbjct: 48 IGDQWCDAADGQTIQVLNPATAEVIARVPRAGQREIDRAVMAARQAFDDSPWSRIKPVER 107
Query: 308 QQLMFKFARLLRENQSKLAAKITEEQGKTIADAEG-DVLRGIQSVEHCCSITSLQLGDSI 484
Q+L++ FA L+ +N + LA + + GK+ AE D+ + + + + G ++
Sbjct: 108 QKLLWNFADLIEKNAALLAEIESIDNGKSAVIAEHVDIRLAVDFLRYMAGFATKIEGRTV 167
Query: 485 Q 487
Q
Sbjct: 168 Q 168
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 58.4 bits (135), Expect = 4e-09
Identities = 31/146 (21%), Positives = 68/146 (46%)
Frame = +2
Query: 131 YIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQ 310
YI G++V+ + ++ ++VIG +A + + +A+ AA + W KS + R
Sbjct: 9 YIAGEWVEGNKGSVANISPADISDVIGHYAQADKAQTEAAIAAAAAGQREWQKSGLEQRY 68
Query: 311 QLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQSVEHCCSITSLQLGDSIQN 490
++ L + +L A + E+GKT+A+ G+ R Q + + Q+G++ ++
Sbjct: 69 SVLMAIGDELIARKDELGAILAREEGKTLAEGVGETYRSGQFFHYYAAEVLRQMGETAES 128
Query: 491 IAKDMDTHSYKVPLXXXXXXAALQFP 568
+ ++ + + P+ FP
Sbjct: 129 VRPGIEIETRREPVGVVGIITPWNFP 154
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 56.8 bits (131), Expect = 1e-08
Identities = 34/101 (33%), Positives = 58/101 (57%)
Frame = +2
Query: 83 LVLRRSYSSSAPTTKLYIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAA 262
+ L RS SS K Y+ G+++D +T + NPAT E +G+V E A+ A
Sbjct: 51 MALFRSQSSLI-RHKGYVGGKWLDGDST--FPVYNPATGEELGQVANMGAKEGELAVQEA 107
Query: 263 KRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLAAKITEEQ 385
+A++TW K+T R + + K+ +L+ ++Q++LA +T EQ
Sbjct: 108 YKAFQTWKKTTAKERSEKLRKWFQLILQHQNELAELLTTEQ 148
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 56.8 bits (131), Expect = 1e-08
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Frame = +2
Query: 92 RRSYSSSAPTTKLYIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRA 271
+ +Y S +L+I+ ++VD + NP T E I + E ++++ A+ AAK A
Sbjct: 321 QHTYEGSG-AVELFINNEFVDCTSGKVFPTINPTTGEKICDISEGDKEDVDKAVKAAKEA 379
Query: 272 YK---TWSKSTVLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDV 418
+K W R +L++K A+L+ + + LA+ T + GK +D+ GD+
Sbjct: 380 FKLGSAWRTMDASMRGKLLYKLAQLIDRDIAYLASLETIDSGKLFSDSVGDM 431
>SB_18188| Best HMM Match : SRP54 (HMM E-Value=0)
Length = 410
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/38 (60%), Positives = 32/38 (84%)
Frame = +2
Query: 419 LRGIQSVEHCCSITSLQLGDSIQNIAKDMDTHSYKVPL 532
LR + VEH CSITSLQ+G+++ ++ KDMDT+SY+VPL
Sbjct: 365 LRTEEVVEHTCSITSLQMGETMPSVTKDMDTYSYRVPL 402
>SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16)
Length = 266
Score = 50.8 bits (116), Expect = 8e-07
Identities = 25/89 (28%), Positives = 52/89 (58%)
Frame = +2
Query: 131 YIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQ 310
+I+G+++ +I+ +P+ EV +VP++ ++ + A+ AA A+K+WS S+ R
Sbjct: 14 FINGEFLSC--DRYIDSYDPSRGEVYCKVPDSGKEHVDLAVAAANAAFKSWSVSSPAYRA 71
Query: 311 QLMFKFARLLRENQSKLAAKITEEQGKTI 397
+ + K A L+ + + A + +QGKT+
Sbjct: 72 ERLRKLADLIEDRLEEFAQAESRDQGKTV 100
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/105 (26%), Positives = 55/105 (52%)
Frame = +2
Query: 119 TTKLYIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTV 298
T K+YI G + NP+ EVI +V + + ++ A++AA +A W K
Sbjct: 1147 TYKMYIGGAQKRPDGNYSRPILNPS-GEVIAQVADGNRKDIREAVEAAHKAASGWGKRAA 1205
Query: 299 LTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQ 433
R Q+++ A L ++++AA+I++ G+++ + + +V IQ
Sbjct: 1206 HNRAQIVYYLAENLEMRRAEVAARISDMTGQSLDECKAEVDASIQ 1250
Score = 34.7 bits (76), Expect = 0.056
Identities = 15/68 (22%), Positives = 37/68 (54%)
Frame = +2
Query: 200 EVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLAAKITE 379
EV+ + ++ A+ AA+ A+++WSK R + ++ AR ++++ +A +
Sbjct: 668 EVLASTTQGETQDIEDAVKAARTAFQSWSKLPGHARARHLYSIARHVQKHARLIAVLESM 727
Query: 380 EQGKTIAD 403
+ GK++ +
Sbjct: 728 DNGKSVRE 735
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 47.6 bits (108), Expect = 7e-06
Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 6/168 (3%)
Frame = +2
Query: 83 LVLRRSYSSSA--PTTKL-YIDGQYVDSRT---TNWIELTNPATNEVIGRVPEATQDELT 244
LV R SS A P L ++DG + T + + +T+P+T + V + + E+
Sbjct: 257 LVPRPELSSDACTPCQNLNFVDGHRCNPITEEISGQMFITDPSTGHISCEVKGSGKTEVK 316
Query: 245 SALDAAKRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLR 424
A+ +A++A+KTWS + R +++ +RL+R+ + +A + GK +A DV
Sbjct: 317 RAVLSARKAFKTWSVLSGSERGRILGDASRLVRKRREDIAKVEVHDNGKPFHEALWDVDN 376
Query: 425 GIQSVEHCCSITSLQLGDSIQNIAKDMDTHSYKVPLXXXXXXAALQFP 568
+E+ + G +Q + ++ + PL A +P
Sbjct: 377 VADVLEYYAGVAPTLSGQHVQ-LPNGSFAYTRREPLGVVGGIGAWNYP 423
>SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +2
Query: 125 KLYIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAK 265
+L+I+G++VDS NP V+ +V AT +++ A+DAAK
Sbjct: 710 QLFINGEFVDSHHGKTFNTINPTDGTVLAQVSLATHEDVDDAVDAAK 756
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 30.7 bits (66), Expect = 0.91
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 323 KFARLLRENQSKLAAKITEEQGKTIADAEGDVLR--GIQSVEHCCSITSLQLGDS 481
++ LREN+ KL AKI E + K + A+ ++ IQ VE S + GDS
Sbjct: 1012 EYVEELRENRRKLEAKINELEQKLASQADIIPMQPIQIQQVESVQSAPDMDFGDS 1066
>SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05)
Length = 301
Score = 30.7 bits (66), Expect = 0.91
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 185 NPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKST 295
+PAT + +G+V + A++AA + ++TW K+T
Sbjct: 115 SPATGDELGQVSNMGAQQWELAVNAAYKEFQTWKKTT 151
>SB_54535| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 30.7 bits (66), Expect = 0.91
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 131 YIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWS 286
+I+G++V ++ +P T EVI P++ + +A+ AAK A W+
Sbjct: 10 FINGEFVPGEDGVYMNDLSPTTGEVICTFPDSNVVDTENAIRAAKSAGIIWA 61
>SB_19612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 29.9 bits (64), Expect = 1.6
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Frame = +2
Query: 98 SYSSSAPTTKL-----YIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSA---- 250
SY S P T L +DG+ DS+T W+ IGR+P++ L
Sbjct: 348 SYIVSEPNTVLEQLHSLLDGKLKDSKTKRWVVSAMGKLVAQIGRIPDSVAGALAKCRADG 407
Query: 251 -LDAAKRAYKTWSKSTV-----LT-RQQLMFKFARLL---RENQSKLAAKITEEQG 388
+D + + + +V LT +++FK AR L R+NQ+ L +T +G
Sbjct: 408 DVDLRQSVFSCFDWGSVPALPLLTFSHRVVFKTARFLFRGRKNQALLLRAMTGFEG 463
>SB_58730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1014
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/58 (24%), Positives = 24/58 (41%)
Frame = +2
Query: 215 VPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLAAKITEEQG 388
+P T+ D K T+L LMF ++ +R N ++ K+T+ G
Sbjct: 791 IPFDTERHYHPEFDGYHPGIKVKQADTILIGYPLMFNMSKQIRRNDLEMYEKVTDRNG 848
>SB_891| Best HMM Match : DUF1098 (HMM E-Value=0.47)
Length = 715
Score = 28.7 bits (61), Expect = 3.7
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Frame = +2
Query: 116 PTTKLYIDGQYVDSRTTNWIELTNPATNEV--------IGRVPEATQDEL-TSALDAAKR 268
P KL+ + + TN T+P +NE+ + ATQ +L TS A K
Sbjct: 417 PQMKLFDNSSALQENATNSQAATSPLSNELQVQQAAGSQAQQSSATQPQLETSVQPADKG 476
Query: 269 AYKTWSKSTVLTRQQLMFKFARLLRENQ-----SKLAAKITEEQGKTIADAEG 412
K S ST T Q++ L++ Q +LAA + ++ G I D G
Sbjct: 477 GTKEQSAST--TPQEMPEVLGEQLQQGQYNPGAQQLAATLPQQSGTLITDNHG 527
>SB_27725| Best HMM Match : RVT_1 (HMM E-Value=1.9e-19)
Length = 262
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 218 PEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFA 331
P++ + T A R+YK W S + TR+Q++ + A
Sbjct: 22 PDSGNNMSTVARAVRTRSYKCWCLSHIFTRKQVLIRTA 59
>SB_17852| Best HMM Match : MFS_1 (HMM E-Value=0.00068)
Length = 256
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -2
Query: 216 TLPITSLVAGLVSSIQLVVLESTYCPSIYSFVVGAELLYERRSTS 82
T PIT + L+S + L V + Y PS+YS + + + ER S S
Sbjct: 127 TSPITLV---LISRLALGVFQGIYYPSLYSLLAKSLPISERSSCS 168
>SB_22517| Best HMM Match : UPF0081 (HMM E-Value=1)
Length = 2568
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +2
Query: 38 IMASAILKLLKSESQLVLRRSYSSSAPTTKLYIDGQYVDSRTTNWIELTNPATNEVIGRV 217
+M LKL + + + SY++ + + +DGQ T +EL NPA ++
Sbjct: 1450 VMDMPALKLAYMDGRDTIPESYTTVSSSDSNGVDGQGGSLTTELAVELINPAACCLV-TD 1508
Query: 218 PEATQDEL 241
P TQ+E+
Sbjct: 1509 PVPTQEEI 1516
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,859,493
Number of Sequences: 59808
Number of extensions: 334813
Number of successful extensions: 980
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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