Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30196
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   6.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   6.7  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 8   TPASPACPCARSTTTPAQRATSSPSGRE 91
           T  + A P  R+TT P Q       GR+
Sbjct: 322 TTVNEAQPYVRNTTVPTQGVARMSRGRQ 349


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 8   TPASPACPCARSTTTPAQRATSSPSGRE 91
           T  + A P  R+TT P Q       GR+
Sbjct: 270 TTVNEAQPYVRNTTVPTQGVARMSRGRQ 297


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 13/53 (24%), Positives = 23/53 (43%)
 Frame = +1

Query: 55  GAESDELSFRQGDLFEKLEDEDEQGWCKGRKDGRVGLYPANYVEPVGH*RRRP 213
           G E      ++ ++ E++EDE +  W K     +   Y    V+ V    +RP
Sbjct: 204 GPEKSASIPKKKEVKEEIEDEPDHKWKKNDSSKKKTRYYYRSVDDVIEKGKRP 256


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 586 IFRCTFTFQIYHKWMIYDST 527
           I  C +T   Y  +MIY +T
Sbjct: 333 ILYCVYTTATYDSFMIYKTT 352


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 586 IFRCTFTFQIYHKWMIYDST 527
           I  C +T   Y  +MIY +T
Sbjct: 58  ILYCVYTTATYDSFMIYKTT 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,497
Number of Sequences: 336
Number of extensions: 2720
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)