Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30196
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 54 2e-08
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 52 7e-08
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 48 1e-06
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 46 4e-06
SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccha... 46 5e-06
SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyce... 45 8e-06
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 44 2e-05
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 44 2e-05
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 43 4e-05
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 42 8e-05
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 38 0.001
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 38 0.001
SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual 38 0.002
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 37 0.003
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 32 0.062
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.11
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 26 4.1
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 25 9.5
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 53.6 bits (123), Expect = 2e-08
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = +1
Query: 10 SGEPGLPVRALYDYTGAESDELSFRQGDLFEKLEDEDEQGWCKGRKDGRVGLYPANYVEP 189
+G PG V+A+YDY E +ELSF + ++ ++ D W +G G GL+P+NYVE
Sbjct: 798 AGGPGKSVKAIYDYQAQEDNELSFFEDEIIANVDCVD-PNWWEGECHGHRGLFPSNYVEE 856
Query: 190 V 192
+
Sbjct: 857 I 857
Score = 44.0 bits (99), Expect = 2e-05
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 28 PVRALYDYTGAESDELSFRQGDLFEKLEDEDEQGWCKGRKDGRVGLYPANYVEPVG 195
P +YDY+ E +E+ + + + LE D+ W G+ GL+P+NYVE G
Sbjct: 729 PAIVIYDYSPEEENEIELVENEQIQILEFVDDGWWLGENSKGQQGLFPSNYVEITG 784
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 52.0 bits (119), Expect = 7e-08
Identities = 25/54 (46%), Positives = 33/54 (61%)
Frame = +1
Query: 31 VRALYDYTGAESDELSFRQGDLFEKLEDEDEQGWCKGRKDGRVGLYPANYVEPV 192
VRALYD+ E ELSF++GD+ LE + W KG VG++P NYV+ V
Sbjct: 220 VRALYDFAATEQGELSFKKGDIILVLESV-YKDWWKGSCKNAVGIFPVNYVQRV 272
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 48.0 bits (109), Expect = 1e-06
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +1
Query: 31 VRALYDYTGAESDELSFRQGDLFEKLEDEDEQGWCKGRKDGRVGLYPANYVEPV 192
V+ALY YT ELS ++GD+ + GW +G +G G +PANYV V
Sbjct: 589 VKALYAYTAQSDMELSIQEGDIIQVTNRNAGNGWSEGILNGVTGQFPANYVTDV 642
Score = 46.4 bits (105), Expect = 4e-06
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 4 TDSGEPGLPVRA--LYDYTGAESDELSFRQGDLFEKLEDEDEQGWCKGRKDGRVGLYPAN 177
T EP V LYD+TG ++ +G F LE +D GW + + DG GL PA+
Sbjct: 509 TTPAEPASKVDGVVLYDFTGEHEGVITASEGQEFTLLEPDDGSGWVRVKIDGTDGLIPAS 568
Query: 178 YVE 186
YV+
Sbjct: 569 YVK 571
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 46.4 bits (105), Expect = 4e-06
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 31 VRALYDYTGAESDELSFRQGDLFEKLEDEDEQG-WCKGRKDGRVGLYPANYVE 186
V ALYDY + +LSF GD E + D Q W GR +G G +P NYV+
Sbjct: 412 VVALYDYAAQAAGDLSFHAGDRIEVVSRTDNQNEWWIGRLNGAQGQFPGNYVQ 464
>SPAPJ696.02 |||actin cortical patch component Lsb4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 46.0 bits (104), Expect = 5e-06
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +1
Query: 34 RALYDYTGAESDELSFRQGDLFEKLE-DEDEQGWCKGRKDGRVGLYPANYVE 186
RA+Y + G + +LSF++GD+ + +E W GR R G++PANYV+
Sbjct: 377 RAMYSFAGEQPGDLSFQKGDIIDIVERSGSHDDWWTGRIGYREGIFPANYVK 428
>SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 45.2 bits (102), Expect = 8e-06
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +1
Query: 19 PGLPVRALYDYTGAESDELSFRQGDLFEKLEDEDEQGWCK--GRKDGRVGLYPANYVEPV 192
P +RALYDYT ++ E+SF +GD F + E+++ W + G G P ++ E +
Sbjct: 25 PRKVIRALYDYTARKATEVSFAKGDFFHVIGRENDKAWYEVCNPAAGTRGFVPVSHFEEI 84
Query: 193 G 195
G
Sbjct: 85 G 85
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 44.0 bits (99), Expect = 2e-05
Identities = 18/51 (35%), Positives = 32/51 (62%)
Frame = +1
Query: 31 VRALYDYTGAESDELSFRQGDLFEKLEDEDEQGWCKGRKDGRVGLYPANYV 183
V A+YD+ G ++ +L F G++ LE + W +G +G+ G++P+NYV
Sbjct: 145 VLAMYDFPGPDAGDLGFHAGEVIIVLEHVNNDWW-RGELNGKEGIFPSNYV 194
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 44.0 bits (99), Expect = 2e-05
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +1
Query: 4 TDSGEPGLP-VRALYDYTGAESDELSFRQGDLFEKLEDEDEQGWCKGR----KDGRVGLY 168
T GEP L V ALYDY +E+SF++GD L + E GW G + + GL+
Sbjct: 861 TAEGEPILGYVIALYDYQAQIPEEISFQKGDTLMVLRTQ-EDGWWDGEIINVPNSKRGLF 919
Query: 169 PANYVEPV 192
P+N+V+ V
Sbjct: 920 PSNFVQTV 927
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 42.7 bits (96), Expect = 4e-05
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +1
Query: 31 VRALYDYTGAESDELSFRQGDLFEKL---EDEDEQGWCKGRKDGRVGLYPANYVEPV 192
V ALYDY A +E+SFR+GD L ED +G+ G D G +P+N+V +
Sbjct: 612 VSALYDYDAAIPEEISFRKGDTIAVLKLYEDGWWEGFVVGEDDHNRGQFPSNFVREI 668
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 41.9 bits (94), Expect = 8e-05
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +1
Query: 16 EPGLPVRALYDYTGAESDELSFRQGDLFEKLEDEDEQGWCKGRKDGRVGLYPANYVE 186
EP ++ALYDYT DE+SF+ + D D W + GL P NYVE
Sbjct: 80 EPSTKMKALYDYTQQSVDEISFQADQTLDCYGDTDSD-WILVGFNNNFGLAPRNYVE 135
Score = 36.3 bits (80), Expect = 0.004
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 40 LYDYTGAESDELSFRQGDLFEKLEDEDEQGWCKGRKDGRVGLYPANYVEP 189
LYD+ +DEL+ + + D W K DG+ G+ P+N+++P
Sbjct: 516 LYDFIAEAADELTVKANMRVVIVNDTASSDWWKCSVDGKEGVVPSNFIKP 565
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 38.3 bits (85), Expect = 0.001
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 37 ALYDYTGAESDELSFRQGDLFEKLEDEDEQGWCKGRKDGRVGLYPANYV 183
ALYD+ G +E++ ++ ++ E ++ E GW K+G G PA YV
Sbjct: 1113 ALYDFAGRSPNEMTIKKDEIIEIVQKEPS-GWWLALKNGAEGWVPATYV 1160
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 38.3 bits (85), Expect = 0.001
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 31 VRALYDYTGAESDELSFRQGDLFEKLEDEDEQGWCKGR--KDGRVGLYPANYV 183
VRALY + G +L F +GDL E L D + W GR G++P+N+V
Sbjct: 11 VRALYAWPGEREGDLKFTEGDLIECLSIGDGKWWI-GRHINTNTQGIFPSNFV 62
>SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 37.5 bits (83), Expect = 0.002
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 31 VRALYDYTGAESDELSFRQGDLFEKLEDEDEQGWCKGR----KDGRVGLYPANYVE 186
VRALY Y E+ D L + + GW KG GR+GL+P+NY+E
Sbjct: 357 VRALYAYKATLPSEIDLNVDDTLVVL-NRQKDGWWKGLVVSPTVGRIGLFPSNYIE 411
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 36.7 bits (81), Expect = 0.003
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Frame = +1
Query: 31 VRALYDYTGAESDELSFRQGDLFEKLEDEDEQGWCKGRK-------DGRVGLYPANYVEP 189
VR Y + +EL ++GDL L++ DE GW G K G G++P+NY P
Sbjct: 426 VRMKYSFEPETENELKLKKGDLLLVLKEIDE-GWWVGEKLGEDGVFTGNTGMFPSNYCVP 484
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 32.3 bits (70), Expect = 0.062
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = +1
Query: 31 VRALYDYTGAESDELSFRQGDLFEKLED------EDEQGWCKGRKDGRVGLYPANY 180
V+A+Y +TG EL GD+ + E E+ K K G G++P NY
Sbjct: 284 VKAIYSFTGRNEKELDLHTGDVIQVSEQLGPDWYMGEKVNSKAEKLGNSGMFPVNY 339
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.11
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 31 VRALYDYTGAESDELSFRQGDLFEKLEDEDEQGWCKGR---KDG--RVGLYPANYVEP 189
V ALY Y + SD+L F G + + + + D W G DG ++G +P ++ EP
Sbjct: 8 VVALYPYRSSFSDDLEFDPGQVIDVVSNLDGD-WYTGTYVDSDGNRKIGSFPKDFTEP 64
>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
Ste6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 37 ALYDYTGAESDE-LSFRQGDLFEKLEDEDEQGWCKGRKDGRVGLYPANYVE 186
A+ DY + + L F GD +E E GWC G + G +P + ++
Sbjct: 7 AISDYENSSNPSFLKFSAGDTIIVIEVL-EDGWCDGICSEKRGWFPTSCID 56
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -1
Query: 326 IEDFLLKKSTSNSVYDVDENSDIFII 249
I+ + + K N++ D+DEN D+ +I
Sbjct: 629 IQYYFIIKPLRNAILDIDENKDLNMI 654
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,309,487
Number of Sequences: 5004
Number of extensions: 44839
Number of successful extensions: 150
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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