Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30195
         (563 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   1.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   3.2  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   5.5  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = +2

Query: 11  AHLVLSGNRSPREIYNVNAANYPTPDRQMALLYKNQLAS*LYVTLWHII 157
           AH+V  G+R+P EI     A+    + ++A  ++  +   L+   WH++
Sbjct: 166 AHIVPEGSRTPIEIPQDFTASDLDEEHRVA-YWREDIGLNLHHWHWHLV 213


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +3

Query: 339 RCLRPKNCHSFLFANVKRRFLNCSKTTNVIGVLNISLSSI 458
           R  RP NC   L+A +   +  C K       L+ SL  +
Sbjct: 712 RLARPANCSPDLYAVMLNCWKECPKNRPTFTELSKSLEGL 751


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -2

Query: 361 QFLGRRHRSSRRLVGKCDGVHAPPSXKLCRSTRLAEFRRR 242
           Q  G+R RS+ R +      H P S    +  R  E R+R
Sbjct: 6   QEFGKRGRSTGRGLKYSGQQHGPQSDSRNQQLRTGEKRKR 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,188
Number of Sequences: 336
Number of extensions: 2253
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)