Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30195
         (563 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical prote...    24   3.9  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   5.2  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    23   9.1  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   9.1  

>AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical protein
           protein.
          Length = 195

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 52  LQRKCRQLPDTRPTDGVVIQKSTGQLTLR 138
           L+RK RQ  D   T+G VI  + G+ T+R
Sbjct: 105 LERKLRQAADEGSTNGTVI--TIGEHTIR 131


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +2

Query: 32  NRSPREIYNVNAANYPTPDRQMALLYKNQLAS*LYVTLWHII 157
           N S  E   +  ++ P P+RQ  L Y   L   + + +++II
Sbjct: 23  NGSTVETSRLLESDLPDPERQTILYYDLPLVYVIIIAIYYII 64


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -2

Query: 493 TSSSDXVGANKVIELREILSTPITFVVLEQFRNLLLT 383
           T  +    A+ +IEL++I  +PI  +    + N + T
Sbjct: 333 TEKTSTCSADDIIELQDIRMSPIASLRNRHYSNTITT 369


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 301 HAPPSXKLCRSTRLAEFRRR 242
           H PPS  L + T LAE +++
Sbjct: 289 HLPPSTALVQQTNLAEQQQK 308


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,855
Number of Sequences: 2352
Number of extensions: 9583
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)