Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30194
         (400 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   4.5  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    20   7.8  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    20   7.8  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 15/41 (36%), Positives = 17/41 (41%)
 Frame = +1

Query: 130 SCPDRTRDLRTNK*NK*KEFTCRLQSRTPIRSRCFSPRGTC 252
           SC DR  D   N  N  K  TC L+      + C    GTC
Sbjct: 120 SCVDRIADFECNCKNGWKGKTCSLKDSHCDHTTC-KNGGTC 159


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 325  WPTETVTIPP 296
            WPT+  TIPP
Sbjct: 1079 WPTQGTTIPP 1088



 Score = 21.8 bits (44), Expect = 2.6
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +2

Query: 269  RRQEIPGSVRWNRHRLRGPLSSESKCSPQR 358
            R+Q   G + WN+ R        +KC  ++
Sbjct: 1127 RKQYCAGGLHWNKERKICDWPKSAKCEEKK 1156


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2

Query: 108 AVLYVLTMSKHNFVPLLAISMC 43
           AVLY + M  H F      +MC
Sbjct: 483 AVLYTIHMGYHGFHNPFTCNMC 504


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 289 SRYLLPSLSYNHCMCPW 239
           +RYL PSLS    M P+
Sbjct: 22  ARYLPPSLSDTRPMLPY 38


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 205 SRTPIRSRCFSPRGTC 252
           S +P+R   ++ +GTC
Sbjct: 63  SNSPLRKARYTEKGTC 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,238
Number of Sequences: 336
Number of extensions: 2506
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)