Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30194
         (400 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical pr...    99   6e-22
U41534-14|AAV34796.1|  226|Caenorhabditis elegans Hypothetical p...    47   6e-06
U41534-13|AAD31050.2|  422|Caenorhabditis elegans Hypothetical p...    47   6e-06
U80931-3|AAO91701.1|  160|Caenorhabditis elegans Hypothetical pr...    44   3e-05
U80931-2|AAB37999.1|  467|Caenorhabditis elegans Hypothetical pr...    44   3e-05
U41534-12|AAM22027.1|  357|Caenorhabditis elegans Hypothetical p...    43   9e-05
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr...    29   1.2  
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr...    28   2.8  
AF040659-1|AAK39389.1|  332|Caenorhabditis elegans Hypothetical ...    27   5.0  
AL110477-13|CAB54337.2|  789|Caenorhabditis elegans Hypothetical...    27   6.5  
AF230279-1|AAG16654.1|  789|Caenorhabditis elegans SWI3-like pro...    27   6.5  
Z50742-5|CAA90618.2|  650|Caenorhabditis elegans Hypothetical pr...    26   8.7  

>U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical
           protein T09B4.8 protein.
          Length = 444

 Score =   99 bits (238), Expect = 6e-22
 Identities = 42/78 (53%), Positives = 60/78 (76%)
 Frame = +3

Query: 162 QQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 341
           Q+V+ ++ + +P      YK  +L+T+G  Q+L+D++GK+YLD FGGIVTVSVGHCHPK+
Sbjct: 2   QRVQALRPL-LPKGHVTYYKDQLLITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKI 60

Query: 342 NAALKDQLDVLWHTTNLY 395
           NAAL +Q   LWHTT++Y
Sbjct: 61  NAALTEQAQKLWHTTSIY 78


>U41534-14|AAV34796.1|  226|Caenorhabditis elegans Hypothetical
           protein C16A3.10c protein.
          Length = 226

 Score = 46.8 bits (106), Expect = 6e-06
 Identities = 19/57 (33%), Positives = 33/57 (57%)
 Frame = +3

Query: 225 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLY 395
           PV L++G   +++D +GK+Y D       V+ GHCHPK+   +++Q   L  T+  +
Sbjct: 40  PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAF 96


>U41534-13|AAD31050.2|  422|Caenorhabditis elegans Hypothetical
           protein C16A3.10a protein.
          Length = 422

 Score = 46.8 bits (106), Expect = 6e-06
 Identities = 19/57 (33%), Positives = 33/57 (57%)
 Frame = +3

Query: 225 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLY 395
           PV L++G   +++D +GK+Y D       V+ GHCHPK+   +++Q   L  T+  +
Sbjct: 40  PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAF 96


>U80931-3|AAO91701.1|  160|Caenorhabditis elegans Hypothetical
           protein T01B11.2b protein.
          Length = 160

 Score = 44.4 bits (100), Expect = 3e-05
 Identities = 19/47 (40%), Positives = 28/47 (59%)
 Frame = +3

Query: 225 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQL 365
           P ++++  MQ+LYD    ++LD    +    VGHCHPKV  A+  QL
Sbjct: 50  PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQL 94


>U80931-2|AAB37999.1|  467|Caenorhabditis elegans Hypothetical
           protein T01B11.2a protein.
          Length = 467

 Score = 44.4 bits (100), Expect = 3e-05
 Identities = 19/47 (40%), Positives = 28/47 (59%)
 Frame = +3

Query: 225 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQL 365
           P ++++  MQ+LYD    ++LD    +    VGHCHPKV  A+  QL
Sbjct: 50  PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQL 94


>U41534-12|AAM22027.1|  357|Caenorhabditis elegans Hypothetical
           protein C16A3.10b protein.
          Length = 357

 Score = 42.7 bits (96), Expect = 9e-05
 Identities = 21/55 (38%), Positives = 31/55 (56%)
 Frame = +3

Query: 225 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTN 389
           PV L++G   +++D +GK+Y D       V+ GHCHPK+   LKD   V+    N
Sbjct: 40  PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKL---LKDNEAVVVFAEN 91


>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical protein
            F29G6.3c protein.
          Length = 1453

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +3

Query: 18   ILQSPQQRNTSKWLIEEQNYASTSSERTARPKC-RRRDFVPRPYTGPSYQQVEQMKGVYM 194
            ++  P + + SK +I+ Q Y   +    + P+     +++P      S+Q+V+     Y+
Sbjct: 995  LIAKPTESHASKIVIQHQ-YIPLAMRHQSVPRLPSEHNYIPIAIHDDSHQKVDLTNHQYL 1053

Query: 195  PPSITNAYKKPVLL 236
            PP +    K+ V L
Sbjct: 1054 PPIVNAEQKEAVKL 1067


>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein
            F29G6.3b protein.
          Length = 1785

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +3

Query: 18   ILQSPQQRNTSKWLIEEQNYASTSSERTARPKC-RRRDFVPRPYTGPSYQQVEQMKGVYM 194
            ++  P + + SK +I+ Q Y   +    + P+     +++P      S+Q+V+     Y+
Sbjct: 995  LIAKPTESHASKIVIQHQ-YIPLAMRHQSVPRLPSEHNYIPIAIHDDSHQKVDLTNHQYL 1053

Query: 195  PPSITNAYKKPVLL 236
            PP +    K+ V L
Sbjct: 1054 PPIVNAEQKEAVKL 1067


>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
           protein K07E3.1 protein.
          Length = 1061

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 108 PKCRRRDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 227
           PK     + P+   G  YQQ++Q      PP + NAY+ P
Sbjct: 203 PKVHPMPYHPQMNKGNHYQQLQQYT---QPPPVYNAYQPP 239


>AF040659-1|AAK39389.1|  332|Caenorhabditis elegans Hypothetical
           protein ZK484.3 protein.
          Length = 332

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +3

Query: 81  STSSERTARPKCRRRDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 227
           S SS   A  K +++  VP+  T P+ Q +E  K + +  +    YK+P
Sbjct: 243 SDSSAAAAAAKKKKKPVVPKLSTKPTKQYLENEKQMRLMATQKCTYKEP 291


>AL110477-13|CAB54337.2|  789|Caenorhabditis elegans Hypothetical
           protein Y113G7B.23 protein.
          Length = 789

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 108 PKCRRRDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 227
           P+ +R  +  +PY GP   Q ++  G   PP   + Y++P
Sbjct: 708 PQQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQPGHPYQQP 747


>AF230279-1|AAG16654.1|  789|Caenorhabditis elegans SWI3-like
           protein protein.
          Length = 789

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 108 PKCRRRDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 227
           P+ +R  +  +PY GP   Q ++  G   PP   + Y++P
Sbjct: 708 PQQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQPGHPYQQP 747


>Z50742-5|CAA90618.2|  650|Caenorhabditis elegans Hypothetical
           protein K09A11.5 protein.
          Length = 650

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 323 PLSSESKCSPQRSTRCIVAYDQP 391
           PL +   CS   ST C++AY  P
Sbjct: 564 PLQNFGVCSNWASTHCMIAYQNP 586


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,696,376
Number of Sequences: 27780
Number of extensions: 240034
Number of successful extensions: 710
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)