Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30194
(400 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 0.97
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 3.0
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 21 3.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 3.9
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 3.9
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 3.9
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 3.9
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 5.2
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 21 5.2
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 6.9
EF032397-1|ABM97933.1| 200|Apis mellifera arginine kinase protein. 20 9.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 20 9.1
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 20 9.1
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 20 9.1
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 23.4 bits (48), Expect = 0.97
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 42 NTSKWLIEEQNYASTSSERTARP 110
+T +WL+ E+ TSS + P
Sbjct: 72 STGEWLLTEEKLPKTSSNASVEP 94
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 3.0
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 301 PPNRSRYLLPSLSYNHC 251
PPNR +P +YN C
Sbjct: 1648 PPNRKLPPVPGSNYNTC 1664
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.4 bits (43), Expect = 3.9
Identities = 10/38 (26%), Positives = 16/38 (42%)
Frame = +3
Query: 111 KCRRRDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKK 224
KC R F P+ YQ + ++ S +A +K
Sbjct: 415 KCEHRPFEPKSTAVQKYQDQDYQPIYFVADSFEDAKEK 452
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 3.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 221 EAGASHPGAHAVVIRQRRQEIPGSVRWN 304
+ AS PG +V E+PGS W+
Sbjct: 403 DVAASGPGLAFLVYPSAVLELPGSSIWS 430
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 3.9
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 13 VTYCNRLNRETHRNG 57
VT C N ET+R G
Sbjct: 562 VTKCKATNEETYRGG 576
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 3.9
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 13 VTYCNRLNRETHRNG 57
VT C N ET+R G
Sbjct: 562 VTKCKATNEETYRGG 576
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 3.9
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 13 VTYCNRLNRETHRNG 57
VT C N ET+R G
Sbjct: 562 VTKCKATNEETYRGG 576
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/27 (29%), Positives = 11/27 (40%)
Frame = -3
Query: 383 RMPQYIELIFEGCIYFRMTMAHGDGDD 303
R P Y + Y++ HG G D
Sbjct: 79 RFPPYNRMDMRNATYYQHQQDHGSGMD 105
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 21.0 bits (42), Expect = 5.2
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 104 TAKMPPTGFRAQTVH 148
T M PTGFR VH
Sbjct: 65 TRHMLPTGFRKVLVH 79
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.6 bits (41), Expect = 6.9
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -3
Query: 239 GEKHRLLIG 213
G+KH+LLIG
Sbjct: 184 GQKHKLLIG 192
>EF032397-1|ABM97933.1| 200|Apis mellifera arginine kinase protein.
Length = 200
Score = 20.2 bits (40), Expect = 9.1
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 152 SRVRSGHEIPSAAFWPCCT 96
+RVR G + F PC T
Sbjct: 106 TRVRCGRSLEGYPFNPCLT 124
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.2 bits (40), Expect = 9.1
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 318 VGHCHPKVNAALKDQL 365
+ + HPK A L DQ+
Sbjct: 199 IDYVHPKDKATLADQI 214
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 20.2 bits (40), Expect = 9.1
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 152 SRVRSGHEIPSAAFWPCCT 96
+RVR G + F PC T
Sbjct: 122 TRVRCGRSLEGYPFNPCLT 140
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 20.2 bits (40), Expect = 9.1
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 318 VGHCHPKVNAALKDQL 365
+ + HPK A L DQ+
Sbjct: 194 IDYVHPKDKATLADQI 209
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,062
Number of Sequences: 438
Number of extensions: 2972
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9885360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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