Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30194
(400 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g39660.1 68417.m05608 alanine--glyoxylate aminotransferase, p... 102 1e-22
At3g08860.1 68416.m01030 alanine--glyoxylate aminotransferase, p... 91 2e-19
At2g38400.1 68415.m04717 alanine--glyoxylate aminotransferase, p... 87 3e-18
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 52 1e-07
At1g80600.1 68414.m09457 acetylornithine aminotransferase, mitoc... 47 4e-06
At3g22200.1 68416.m02801 4-aminobutyrate aminotransferase / gamm... 38 0.002
At5g63570.1 68418.m07979 glutamate-1-semialdehyde 2,1-aminomutas... 31 0.28
At3g48730.1 68416.m05321 glutamate-1-semialdehyde 2,1-aminomutas... 29 0.86
At5g64810.1 68418.m08150 WRKY family transcription factor contai... 28 2.0
At3g27390.1 68416.m03424 expressed protein 27 3.5
At3g19280.1 68416.m02445 glycoprotein 3-alpha-L-fucosyltransfera... 27 6.1
At3g06850.2 68416.m00813 branched chain alpha-keto acid dehydrog... 27 6.1
At3g06850.1 68416.m00812 branched chain alpha-keto acid dehydrog... 27 6.1
At1g49710.1 68414.m05573 fucosyltransferase-like protein, putati... 26 8.0
>At4g39660.1 68417.m05608 alanine--glyoxylate aminotransferase,
putative / beta-alanine-pyruvate aminotransferase,
putative / AGT, putative similar to SP|Q64565
Alanine--glyoxylate aminotransferase 2, mitochondrial
precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
aminotransferase) {Rattus norvegicus}; contains Pfam
profile PF00202: aminotransferase, class III
Length = 476
Score = 102 bits (244), Expect = 1e-22
Identities = 43/87 (49%), Positives = 60/87 (68%)
Frame = +3
Query: 135 PRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTV 314
PRPY GPS +V Q + ++ PS+ + Y+KP+ + +G MQ+LYD G+RYLD F GIVTV
Sbjct: 48 PRPYKGPSADEVLQKRKKFLGPSLFHYYQKPLNIVEGKMQYLYDESGRRYLDAFAGIVTV 107
Query: 315 SVGHCHPKVNAALKDQLDVLWHTTNLY 395
S GHCHP + A+ +Q +L H T +Y
Sbjct: 108 SCGHCHPDILNAITEQSKLLQHATTIY 134
>At3g08860.1 68416.m01030 alanine--glyoxylate aminotransferase,
putative / beta-alanine-pyruvate aminotransferase,
putative / AGT, putative similar to similar to SP|Q64565
Alanine--glyoxylate aminotransferase 2, mitochondrial
precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
aminotransferase) {Rattus norvegicus}; contains Pfam
profile PF00202: aminotransferase, class III
Length = 481
Score = 91.1 bits (216), Expect = 2e-19
Identities = 40/120 (33%), Positives = 70/120 (58%)
Frame = +3
Query: 36 QRNTSKWLIEEQNYASTSSERTARPKCRRRDFVPRPYTGPSYQQVEQMKGVYMPPSITNA 215
+ +S+ + + + T PK ++ P PY GPS ++ + ++ P++ +
Sbjct: 20 RHGSSQTAAQRTSSVRETETETKLPKMPPFNYSPPPYDGPSTAEIIAKRREFLSPALFHF 79
Query: 216 YKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLY 395
Y P+ + + MQ+++D +G+RYLD FGGI TVS GHCHP+V ++ QL ++ H+T LY
Sbjct: 80 YNTPLNIVEAKMQYVFDENGRRYLDAFGGIATVSCGHCHPEVVNSVVKQLKLINHSTILY 139
>At2g38400.1 68415.m04717 alanine--glyoxylate aminotransferase,
putative / beta-alanine-pyruvate aminotransferase,
putative / AGT, putative similar to SP|Q64565
Alanine--glyoxylate aminotransferase 2, mitochondrial
precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
aminotransferase) {Rattus norvegicus}; contains Pfam
profile PF00202: aminotransferase, class III
Length = 477
Score = 87.4 bits (207), Expect = 3e-18
Identities = 38/89 (42%), Positives = 54/89 (60%)
Frame = +3
Query: 129 FVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIV 308
+ P PYTGPS + + ++ PS+ Y+KP+ + G MQ+L+D G+RYLD F GI
Sbjct: 48 YTPPPYTGPSADVILSKRKEFLSPSMFCLYRKPLNIVDGKMQYLFDESGRRYLDAFAGIA 107
Query: 309 TVSVGHCHPKVNAALKDQLDVLWHTTNLY 395
V+ GHCHP V + +Q+ L H T LY
Sbjct: 108 VVNCGHCHPDVVEPVINQIKRLQHPTVLY 136
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 52.0 bits (119), Expect = 1e-07
Identities = 21/58 (36%), Positives = 36/58 (62%)
Frame = +3
Query: 201 SITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVL 374
S N + PV+ ++ + ++D +GKRY+D V+ GHCHPK+ AL++Q++ L
Sbjct: 51 SAHNYHPVPVVFSRANGSTIWDPEGKRYIDFLAAYSAVNQGHCHPKIMKALQEQVEKL 108
>At1g80600.1 68414.m09457 acetylornithine aminotransferase,
mitochondrial, putative / acetylornithine transaminase,
putative / AOTA, putative / ACOAT, putative similar to
SP|O04866 Acetylornithine aminotransferase,
mitochondrial precursor (EC 2.6.1.11) (ACOAT)
(Acetylornithine transaminase) (AOTA) {Alnus glutinosa};
contains Pfam profile PF00202: aminotransferase, class
III
Length = 457
Score = 47.2 bits (107), Expect = 4e-06
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = +3
Query: 219 KKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLY 395
+ PV+L+ G L+D +GK YLD GI ++GH P A+ +Q VL H +N+Y
Sbjct: 75 RAPVVLSSGKGCKLFDPEGKEYLDCASGIAVNALGHGDPDWLRAVTEQAGVLAHVSNVY 133
>At3g22200.1 68416.m02801 4-aminobutyrate aminotransferase /
gamma-amino-N-butyrate transaminase / GABA transaminase
/ beta-alanine--oxoglutarate aminotransferase identical
to gamma-aminobutyrate transaminase subunit precursor
[Arabidopsis thaliana] (EC 2.6.1.19) GI:14030435;
contains Pfam profile PF00202: aminotransferase, class
III; identical to cDNA gamma-aminobutyrate transaminase
subunit precursor, nuclear gene for mitochondrial
product GI:14030434
Length = 504
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/50 (30%), Positives = 31/50 (62%)
Frame = +3
Query: 225 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVL 374
P+++ + ++YD+ GK+YLD G+ ++G P++ +A +QL+ L
Sbjct: 70 PLVIAKSEGSYVYDDTGKKYLDSLAGLWCTALGGNEPRLVSAAVEQLNTL 119
>At5g63570.1 68418.m07979 glutamate-1-semialdehyde 2,1-aminomutase 1
(GSA 1) / glutamate-1-semialdehyde aminotransferase 1
(GSA-AT 1) identical to GSA 1 [SP|P42799]
Length = 474
Score = 31.1 bits (67), Expect = 0.28
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 222 KPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQL 365
+PVL+ ++D DG Y+D G +GH +V AAL + +
Sbjct: 81 QPVLIDSVKGSKMWDIDGNEYIDYVGSWGPAIIGHADDEVLAALAETM 128
>At3g48730.1 68416.m05321 glutamate-1-semialdehyde 2,1-aminomutase 2
(GSA 2) / glutamate-1-semialdehyde aminotransferase 2
(GSA-AT 2) identical to GSA2 [SP|Q42522]
Length = 472
Score = 29.5 bits (63), Expect = 0.86
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 222 KPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQL 365
+PV++ + D DG Y+D G +GH +V AAL + +
Sbjct: 79 QPVVMDSAKGSRIRDIDGNEYIDYVGSWGPAIIGHADDEVLAALAETM 126
>At5g64810.1 68418.m08150 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA -binding domain
Length = 194
Score = 28.3 bits (60), Expect = 2.0
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 60 IEEQNYASTSSERTARPKCRRRDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLT 239
I ++NY SSE + K RD Y +Y+ GV+ S++N Y ++L+
Sbjct: 127 INKRNYYKCSSEGCSVKKRVERDGDDAAYVITTYE------GVHNHESLSNVYYNEMVLS 180
Query: 240 QGHMQW 257
H W
Sbjct: 181 YDHDNW 186
>At3g27390.1 68416.m03424 expressed protein
Length = 588
Score = 27.5 bits (58), Expect = 3.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 105 RPKCRRRDFVPRPYTGP 155
RPK RR+D P P++GP
Sbjct: 309 RPKYRRKDEEPTPFSGP 325
>At3g19280.1 68416.m02445 glycoprotein 3-alpha-L-fucosyltransferase
A / FucTA / core alpha-(1,3)-fucosyltransferase (FUT11)
identical to Glycoprotein 3-alpha-L-fucosyltransferase A
(Core alpha-(1,3)-fucosyltransferase)(Fuc-T C3) (FucTA)
(FucT1) (AtFUT11)(SP:Q9LJK1) from [Arabidopsis
thaliana]; contains Pfam profile PF00852: Fucosyl
transferase; identical to cDNA
alpha1,3-fucosyltransferase (FucTA) GI:13992482
Length = 501
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 80 FDIVRTYSTAKMPPTGFRAQTVHGTFVPTSRTNERSLHAAF 202
+DIV T S + P G+ + + P E++L AAF
Sbjct: 176 YDIVMTTSLSSDVPVGYFSWAEYDIMAPVQPKTEKALAAAF 216
>At3g06850.2 68416.m00813 branched chain alpha-keto acid
dehydrogenase E2 subunit (din3) identical to branched
chain alpha-keto acid dehydrogenase E2 subunit (din3)
[Arabidopsis thaliana] GI:7021284
Length = 483
Score = 26.6 bits (56), Expect = 6.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 299 WNRHRLRGPLSSESKCSP 352
W HR P SS S CSP
Sbjct: 7 WRSHRFLRPFSSSSVCSP 24
>At3g06850.1 68416.m00812 branched chain alpha-keto acid
dehydrogenase E2 subunit (din3) identical to branched
chain alpha-keto acid dehydrogenase E2 subunit (din3)
[Arabidopsis thaliana] GI:7021284
Length = 483
Score = 26.6 bits (56), Expect = 6.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 299 WNRHRLRGPLSSESKCSP 352
W HR P SS S CSP
Sbjct: 7 WRSHRFLRPFSSSSVCSP 24
>At1g49710.1 68414.m05573 fucosyltransferase-like protein, putative
/ FucT2, putative / FucTB, putative (FUT12) identical to
Putative fucosyltransferase-like protein (FucTB) (FucT2)
(AtFUT12) (Swiss-Prot:Q9FX97) [Arabidopsis thaliana];
similar to glycoprotein 3-alpha-L-fucosyltransferase A
(SP:Q9LJK1) [Arabidopsis thaliana]; contains Pfam
profile PF00852: Fucosyl transferase
Length = 513
Score = 26.2 bits (55), Expect = 8.0
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 80 FDIVRTYSTAKMPPTGFRAQTVHGTFVPTSRTNERSLHAAF 202
+DIV T S + P G+ + + P ER++ AAF
Sbjct: 187 YDIVMTTSLSSDVPVGYFSWAEYDIMSPVQPKTERAIAAAF 227
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,983,487
Number of Sequences: 28952
Number of extensions: 217767
Number of successful extensions: 614
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 575830496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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