Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30191
         (534 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   0.97 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   3.0  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   5.2  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.8 bits (49), Expect = 0.97
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 438 QDDKNSYTRELATRTLNITRAPERFD 361
           +D  NSY  ELAT    + R+ +R D
Sbjct: 41  RDKLNSYIGELATLVPMVARSAKRMD 66


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 424 IFVVLVSLFCC*RCINRYLY 483
           +FV+L  L+    C+N ++Y
Sbjct: 300 VFVILTLLYSLNSCVNPWIY 319


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 533 FFFFFYNVSLRTVVV 489
           F   F+NVSLR ++V
Sbjct: 68  FMLTFFNVSLRIILV 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,913
Number of Sequences: 336
Number of extensions: 2036
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)