Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30188
         (657 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC010900-1|AAH10900.1|  159|Homo sapiens UBE2W protein protein.        31   2.7  
AK001873-1|BAA91954.1|  151|Homo sapiens protein ( Homo sapiens ...    30   6.3  
L14837-1|AAA02891.1| 1736|Homo sapiens tight junction (zonula oc...    30   8.3  
DQ015919-1|AAY22179.1| 1748|Homo sapiens tight junction protein ...    30   8.3  
BC111712-1|AAI11713.1| 1748|Homo sapiens tight junction protein ...    30   8.3  
BC031604-1|AAH31604.1|  584|Homo sapiens C17orf71 protein protein.     30   8.3  
AK026858-1|BAB15576.1|  991|Homo sapiens protein ( Homo sapiens ...    30   8.3  
AF349467-1|AAL83913.1| 1023|Homo sapiens amplified in breast can...    30   8.3  

>BC010900-1|AAH10900.1|  159|Homo sapiens UBE2W protein protein.
          Length = 159

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +1

Query: 304 SFNRRLSVAEL*IQSDLGSAHVVQGRRRLKLLHQWILSFDQANDSV**GQQFRLVFGFHV 483
           S  +RL    L +Q+D      +  +     + QWI+  + A  ++  G++F+L+F F  
Sbjct: 3   SMQKRLQKELLALQNDPSPGMTLNEKSAQNSITQWIVDMESAPGTLYEGEKFQLLFKFSS 62

Query: 484 RRP 492
           R P
Sbjct: 63  RYP 65


>AK001873-1|BAA91954.1|  151|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11011 fis, clone PLACE1003174, moderately
           similar to UBIQUITIN-CONJUGATING ENZYME E2-18 KD (EC
           6.3.2.19). ).
          Length = 151

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 17/63 (26%), Positives = 32/63 (50%)
 Frame = +1

Query: 304 SFNRRLSVAEL*IQSDLGSAHVVQGRRRLKLLHQWILSFDQANDSV**GQQFRLVFGFHV 483
           S  +RL    L +Q+D      +  +     + QWI+  + A+ ++  G++F+L+F F  
Sbjct: 3   SMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGASGTLYEGEKFQLLFKFSS 62

Query: 484 RRP 492
           R P
Sbjct: 63  RYP 65


>L14837-1|AAA02891.1| 1736|Homo sapiens tight junction (zonula
           occludens) protein ZO-1 protein.
          Length = 1736

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 90  SWTITNASPTTWPRTRNVSRAEGRSPRSTRYRCSS 194
           S  +   S   WPR R+ SR    SPRS R   +S
Sbjct: 132 SGVVNRRSEKIWPRDRSASRERSLSPRSDRRSVAS 166


>DQ015919-1|AAY22179.1| 1748|Homo sapiens tight junction protein 1
           (zona occludens 1) protein.
          Length = 1748

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 90  SWTITNASPTTWPRTRNVSRAEGRSPRSTRYRCSS 194
           S  +   S   WPR R+ SR    SPRS R   +S
Sbjct: 144 SGVVNRRSEKIWPRDRSASRERSLSPRSDRRSVAS 178


>BC111712-1|AAI11713.1| 1748|Homo sapiens tight junction protein 1
           (zona occludens 1) protein.
          Length = 1748

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 90  SWTITNASPTTWPRTRNVSRAEGRSPRSTRYRCSS 194
           S  +   S   WPR R+ SR    SPRS R   +S
Sbjct: 144 SGVVNRRSEKIWPRDRSASRERSLSPRSDRRSVAS 178


>BC031604-1|AAH31604.1|  584|Homo sapiens C17orf71 protein protein.
          Length = 584

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
 Frame = +2

Query: 338 ESNRTLAQHMSFKEDVVLSFYINGSYPL-IRLTTVFDKGNNFDLCSAFTFADLAGGLPIF 514
           E NRT A    +   ++ ++Y   S  L + LT++ D       C A    +  GGL + 
Sbjct: 120 EGNRTEAGSQDYS--LLQAYYSQESKVLYLLLTSICDNSQLLRACRALQSGEAGGGLSLP 177

Query: 515 HINPNDQRTAQWLSKDLTLLHIYEREHI 598
           H   ++    Q   + L+LL+++   HI
Sbjct: 178 HAEAHEFWKHQEKLQCLSLLYLFSVCHI 205


>AK026858-1|BAB15576.1|  991|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23205 fis, clone ADSE00359. ).
          Length = 991

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
 Frame = +2

Query: 338 ESNRTLAQHMSFKEDVVLSFYINGSYPL-IRLTTVFDKGNNFDLCSAFTFADLAGGLPIF 514
           E NRT A    +   ++ ++Y   S  L + LT++ D       C A    +  GGL + 
Sbjct: 124 EGNRTEAGSQDYS--LLQAYYSQESKVLYLLLTSICDNSQLLRACRALQSGEAGGGLSLP 181

Query: 515 HINPNDQRTAQWLSKDLTLLHIYEREHI 598
           H   ++    Q   + L+LL+++   HI
Sbjct: 182 HAEAHEFWKHQEKLQCLSLLYLFSVCHI 209


>AF349467-1|AAL83913.1| 1023|Homo sapiens amplified in breast cancer
           2 protein.
          Length = 1023

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
 Frame = +2

Query: 338 ESNRTLAQHMSFKEDVVLSFYINGSYPL-IRLTTVFDKGNNFDLCSAFTFADLAGGLPIF 514
           E NRT A    +   ++ ++Y   S  L + LT++ D       C A    +  GGL + 
Sbjct: 124 EGNRTEAGSQDYS--LLQAYYSQESKVLYLLLTSICDNSQLLRACRALQSGEAGGGLSLP 181

Query: 515 HINPNDQRTAQWLSKDLTLLHIYEREHI 598
           H   ++    Q   + L+LL+++   HI
Sbjct: 182 HAEAHEFWKHQEKLQCLSLLYLFSVCHI 209


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,822,703
Number of Sequences: 237096
Number of extensions: 2211390
Number of successful extensions: 5041
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5041
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)