Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30187
(710 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54248| Best HMM Match : ECH (HMM E-Value=6.6e-11) 128 6e-30
SB_43237| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 4e-22
SB_6823| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 4e-19
SB_19701| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_20977| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_31836| Best HMM Match : ECH (HMM E-Value=3.3e-06) 54 2e-07
SB_32164| Best HMM Match : ECH (HMM E-Value=0.02) 44 9e-05
SB_58262| Best HMM Match : Cytochrom_B_C (HMM E-Value=0.77) 40 0.002
SB_37813| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_23761| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08) 30 2.1
SB_21536| Best HMM Match : RVT_1 (HMM E-Value=0.0043) 29 3.7
SB_17070| Best HMM Match : MFS_1 (HMM E-Value=0.083) 29 4.9
SB_29506| Best HMM Match : 7tm_1 (HMM E-Value=0.46) 28 6.5
SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42) 28 8.6
>SB_54248| Best HMM Match : ECH (HMM E-Value=6.6e-11)
Length = 230
Score = 128 bits (308), Expect = 6e-30
Identities = 57/88 (64%), Positives = 69/88 (78%)
Frame = +3
Query: 447 SRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALT 626
S KP +AAI G+C+GGGLE AL+C YRIAV D KT PEVMLGLLPG GGTQRLP L
Sbjct: 2 SPKPVVAAIMGTCMGGGLELALSCHYRIAVNDGKTVLSAPEVMLGLLPGAGGTQRLPRLV 61
Query: 627 SIPTTLDLALTGKTVKADKAKKLGIVDL 710
+P +LD+ LTGK ++A KAKK+G+VD+
Sbjct: 62 GLPDSLDMMLTGKNIRAQKAKKMGLVDM 89
>SB_43237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 101 bits (243), Expect = 4e-22
Identities = 59/172 (34%), Positives = 93/172 (54%)
Frame = +3
Query: 189 NGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISM 368
N V + L+ P +N+L +M E+S+ ++ E + + ++++G F AGADI
Sbjct: 49 NNVGFIQLNRPKA-LNALCNDLMYELSDALDAFEADKNV-GCIVLTGCGRAFAAGADIKE 106
Query: 369 IENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSK 548
++ T ++ +S GH + R+ + KP IAA+ G LGGG E A+ C I K
Sbjct: 107 MQPL-TYQKCLSGDFLGH--WTRVSKCTKPVIAAVNGFALGGGCELAMMCD--IIYASDK 161
Query: 549 TGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLGIV 704
FG PE+++G +PG GGTQRL +++ LTG + AD A K G+V
Sbjct: 162 AKFGQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDPINADHALKAGLV 213
>SB_6823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 92.3 bits (219), Expect = 4e-19
Identities = 62/183 (33%), Positives = 98/183 (53%)
Frame = +3
Query: 159 SQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPG 338
S V+T+ K V VV++ P K N++N++ +++S E + + AV+ +GK G
Sbjct: 28 SYVNTEQK--GKVLVVSIARPE-KRNAINSETADQLSETFRHFEIDDSVNVAVL-TGKGG 83
Query: 339 CFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALAC 518
F AG+D+ + + + S G E + ++ +P I AIQG +GGGLE AL C
Sbjct: 84 NFCAGSDLQELAQKDAETYMKSFYPPG-EGDGPMAEANQPVIGAIQGYAVGGGLELALLC 142
Query: 519 KYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLG 698
R+ +DS FG G+ GG RLP L + LDL +TG+ VKA +A ++G
Sbjct: 143 DLRVCEEDSV--FGFFNRRFGVPLVDGGAVRLPYLIGLSRALDLIMTGRAVKAQEAIEIG 200
Query: 699 IVD 707
+V+
Sbjct: 201 LVN 203
>SB_19701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 83.0 bits (196), Expect = 2e-16
Identities = 34/91 (37%), Positives = 61/91 (67%)
Frame = +3
Query: 231 VNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLS 410
+ + Q + + ++ EI N ++ +V++S KPGC+IAGADI+M++ + +V ++
Sbjct: 56 IYGIRQQPLLPLRKVMQEITHNPDVKCSVLMSAKPGCWIAGADINMLKAGENAAQVTEIA 115
Query: 411 KRGHEIFRRIEQSRKPYIAAIQGSCLGGGLE 503
K G ++++ +E S KP +AAI G+C+GGGLE
Sbjct: 116 KGGQQVYQFLEDSPKPVVAAIMGTCMGGGLE 146
>SB_20977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 69.3 bits (162), Expect = 3e-12
Identities = 39/159 (24%), Positives = 79/159 (49%)
Frame = +3
Query: 231 VNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLS 410
VNS + + +EE+ + + ++E+N+ ++ S P F AG D+ ++ +
Sbjct: 8 VNSFSLEFLEEIHDTLEDLESNTDCRGLIVTSSMPKVFSAGLDLVKELYKSDEKRLFVFW 67
Query: 411 KRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLP 590
+R +++ ++ SR +AA+ G + GG A AC YR+ + G+ E ++G+
Sbjct: 68 RRFQDVWMQLYGSRLATVAAVNGHAVAGGCLLAAACDYRLMA--ANFTIGMNETIVGIAI 125
Query: 591 GGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLGIVD 707
+Q + L T + G + A++A+K+G+VD
Sbjct: 126 PFWISQNIVNLVGTSTGERICALGTMLSAEEAQKIGLVD 164
>SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 63.7 bits (148), Expect = 1e-10
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 12/170 (7%)
Frame = +3
Query: 234 NSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLSK 413
N+L +M ++ +V+E+E +A +I+ G G F++G D+S+++ T E +
Sbjct: 899 NALTGHMMVRLAEVVDELEKWQAGKA-LILHGDAGTFVSGGDLSVLKEIHTPGEGEQMCY 957
Query: 414 RGHEIFRRIEQSRKPYIAAIQGSCLGGGLET-------ALACKYRIAVKDSKTGFGLPEV 572
H+ F R+++ +AAIQG +GGG E + + + PE+
Sbjct: 958 FMHKTFARLQRLPLISLAAIQGLAIGGGAEAHTQGGAGGVNAPPHTTAESPFSVLNRPEI 1017
Query: 573 -----MLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLGIVD 707
+GL PG GG RL L +++ L K++K +++ G+VD
Sbjct: 1018 KFVQARMGLTPGWGGGARLVQLVGRQKAMEILLQCKSMKLEESLMCGLVD 1067
>SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1683
Score = 56.0 bits (129), Expect = 3e-08
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 2/161 (1%)
Frame = +3
Query: 231 VNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLS 410
V+ + V+ E +I+N G + P F AG D+ + + K ++V+
Sbjct: 1441 VDEVFRTVLAEAESILNSRPLVYGGSVSSPTDDLPNIFCAGLDLKEVLALR-KSKLVTFR 1499
Query: 411 KRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGL-- 584
K +++ R+ SR +AAI+G + GG +LAC Y + D + GLPE+ LGL
Sbjct: 1500 KTFQDMWSRLYGSRLVTMAAIKGHAIAGGCVLSLACDYSVMASDFR--IGLPELSLGLYF 1557
Query: 585 LPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLGIVD 707
P GT L + + AD A +G++D
Sbjct: 1558 APWMAGT--LSNAVGRNRAEKIIYNAQVFDADDAAGIGLID 1596
>SB_31836| Best HMM Match : ECH (HMM E-Value=3.3e-06)
Length = 149
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/67 (40%), Positives = 38/67 (56%)
Frame = +3
Query: 423 EIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGG 602
E F IE+ KP IAA+ +C+GGG++ AC R+ D+ F + EV LGL G
Sbjct: 30 ESFTAIEKCEKPVIAAVHSACVGGGVDMICACDIRLCTSDA--WFQVKEVELGLAADVGT 87
Query: 603 TQRLPAL 623
QR+P +
Sbjct: 88 LQRMPKI 94
>SB_32164| Best HMM Match : ECH (HMM E-Value=0.02)
Length = 280
Score = 44.4 bits (100), Expect = 9e-05
Identities = 31/82 (37%), Positives = 41/82 (50%)
Frame = +3
Query: 456 PYIAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIP 635
P I I G GL ++ +YR+A + KT F +PE +G P GG LP L+
Sbjct: 111 PMIRKIYPQLKGVGL--SVHGRYRVATE--KTTFAMPETAIGFFPDVGGAHALPRLSG-K 165
Query: 636 TTLDLALTGKTVKADKAKKLGI 701
L LALTG+ +K K GI
Sbjct: 166 LGLFLALTGQRLKGYNVKLAGI 187
>SB_58262| Best HMM Match : Cytochrom_B_C (HMM E-Value=0.77)
Length = 393
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 453 KPYIAAIQGSCLGGGLETALACKYRIAVKDS 545
KP I AIQG +GGGLE AL C R+ +DS
Sbjct: 358 KPVIGAIQGYAVGGGLELALLCDLRVCEEDS 388
>SB_37813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 33.1 bits (72), Expect = 0.23
Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +3
Query: 237 SLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKE-EVVSLSK 413
+++T +S+++ +E + ++ V++ G + G +++IE+ E +
Sbjct: 220 AMSTAQCRRLSSVLQAVERDDRVKV-VVLKGGYNFYSNGIHLNVIEDATDPALEAWNNIN 278
Query: 414 RGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALA 515
++I R + S+K I A+QG+ GG+ ALA
Sbjct: 279 AINDIVRNVFTSKKVTITAMQGNAGAGGVMMALA 312
>SB_23761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 201 VVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIIS 326
V T+ VNS N Q+MEE+ I+ ++E+N +I S
Sbjct: 60 VATIKLNRKPVNSFNMQLMEEICLILEDLESNKDCRGLIITS 101
>SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08)
Length = 286
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = +2
Query: 389 GRSCQSV*KRT*NIQKNRTITETV---YCRNTRQLSRRWIRDCSCM*ISHCCERLQN 550
G SC+ V T NI + T+ TV +CR R + W+ S C LQN
Sbjct: 220 GTSCKHVTLPTENITEIPTVLVTVKRNHCRLKRDAAMAWVEGVSTSGFDLCLRELQN 276
>SB_21536| Best HMM Match : RVT_1 (HMM E-Value=0.0043)
Length = 831
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 580 PNMTSGSPNPVLESFTAMRYLHARAVSNPPPRQLPCIAAIYGF 452
PN + +P+ S + ++ A A N P P IAA+ GF
Sbjct: 559 PNSSRATPSSTTASKDSRKHEKAPAADNQKPEDTPDIAAMMGF 601
>SB_17070| Best HMM Match : MFS_1 (HMM E-Value=0.083)
Length = 313
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 209 SDYVNSIDQFAFCMYLACWNGILSAMYTGYE 117
SD VN++ + CM L ++S + TGY+
Sbjct: 163 SDCVNTLVLYQMCMVLTALTSVISILATGYQ 193
>SB_29506| Best HMM Match : 7tm_1 (HMM E-Value=0.46)
Length = 194
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = -2
Query: 415 LLDRLTTSSFVLQFSIMLISAPAMKHPGLPDIMTAASIPEFVSISFTMLLTSSITWVLSE 236
+ D L+ ++F + + ++ A K P L D S+PE V T S + VLS
Sbjct: 26 MADLLSLTTFPIYTIVQILQYAAGKSPPLNDDSAEVSLPEAVQQRRTKTFRSIVRMVLSS 85
Query: 235 FTL 227
L
Sbjct: 86 TLL 88
>SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42)
Length = 426
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -2
Query: 601 PPPPGKSPNMTSGS---PNPVLESFTAMRYLHARAVSNPPPRQLP 476
PPP PN TS S P P+ + AM L V +PPP P
Sbjct: 297 PPPAPPLPNFTSPSPPPPPPLPPAMPAMDDLLPPEVLSPPPPPPP 341
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,964,727
Number of Sequences: 59808
Number of extensions: 476089
Number of successful extensions: 1543
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1526
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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