Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30187
(710 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fat... 114 5e-26
At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP... 112 3e-25
At4g16800.1 68417.m02537 enoyl-CoA hydratase, putative similar t... 94 9e-20
At5g43280.1 68418.m05290 enoyl-CoA hydratase/isomerase family pr... 84 1e-16
At4g16210.1 68417.m02460 enoyl-CoA hydratase/isomerase family pr... 70 2e-12
At3g24360.1 68416.m03058 enoyl-CoA hydratase/isomerase family pr... 62 3e-10
At4g13360.1 68417.m02089 enoyl-CoA hydratase/isomerase family pr... 52 5e-07
At2g30650.1 68415.m03738 3-hydroxyisobutyryl-coenzyme A hydrolas... 51 7e-07
At2g30660.1 68415.m03739 3-hydroxyisobutyryl-coenzyme A hydrolas... 47 1e-05
At1g60550.1 68414.m06816 naphthoate synthase, putative / dihydro... 46 3e-05
At5g65940.1 68418.m08301 3-hydroxyisobutyryl-coenzyme A hydrolas... 45 4e-05
At3g60510.1 68416.m06768 enoyl-CoA hydratase/isomerase family pr... 45 6e-05
At1g65520.1 68414.m07434 enoyl-CoA hydratase/isomerase family pr... 40 0.002
At4g14440.1 68417.m02227 enoyl-CoA hydratase/isomerase family pr... 37 0.011
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 36 0.020
At4g14430.1 68417.m02226 enoyl-CoA hydratase/isomerase family pr... 36 0.027
At2g41750.1 68415.m05161 DTW domain-containing protein contains ... 32 0.33
At4g36420.1 68417.m05174 ribosomal protein L12 family protein 30 1.3
At2g05250.1 68415.m00553 DNAJ heat shock N-terminal domain-conta... 30 1.3
At2g05230.1 68415.m00551 DNAJ heat shock N-terminal domain-conta... 30 1.3
At3g18370.1 68416.m02336 C2 domain-containing protein contains P... 29 2.3
At4g33420.1 68417.m04749 peroxidase, putative identical to class... 29 4.0
At1g10050.1 68414.m01133 glycosyl hydrolase family 10 protein / ... 29 4.0
At5g39760.1 68418.m04816 zinc finger homeobox protein-related / ... 28 5.3
At2g27810.2 68415.m03372 xanthine/uracil permease family protein... 28 5.3
At2g27810.1 68415.m03371 xanthine/uracil permease family protein... 28 5.3
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 28 5.3
At4g08113.1 68417.m01331 myosin heavy chain-related similar to M... 28 7.0
At3g31990.1 68416.m04051 hypothetical protein similar to putativ... 28 7.0
At1g59890.1 68414.m06747 paired amphipathic helix repeat-contain... 28 7.0
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 28 7.0
At1g25520.1 68414.m03169 expressed protein contains Pfam profile... 28 7.0
At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding famil... 27 9.3
At4g32640.1 68417.m04646 sec23/sec24 transport protein-related 27 9.3
At4g20300.2 68417.m02965 expressed protein 27 9.3
At4g20300.1 68417.m02964 expressed protein 27 9.3
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 27 9.3
>At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fatty
acid multifunctional protein (AIM1) identical to
gi:4337025; contains Pfam profiles PF02737
(3-hydroxyacyl-CoA dehydrogenase, NAD binding domain),
PF00378 (enoyl-CoA hydratase/isomerase family protein),
PF00725 (3-hydroxyacyl-CoA dehydrogenase)
Length = 721
Score = 114 bits (275), Expect = 5e-26
Identities = 62/174 (35%), Positives = 101/174 (58%), Gaps = 1/174 (0%)
Frame = +3
Query: 189 NGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISM 368
+GV V+T+ +P VNSL + ++ + + + ++A V+I G G F G DI++
Sbjct: 14 DGVAVITISNP--PVNSLASPIISGLKEKFRDANQRNDVKAIVLI-GNNGRFSGGFDINV 70
Query: 369 IENCKTKEEVVSLSKRGHEIFRRI-EQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDS 545
+ ++ + + E+ + E SRKP +AA++G LGGGLE A+AC R+A
Sbjct: 71 FQQVHKTGDLSLMPEVSVELVCNLMEDSRKPVVAAVEGLALGGGLELAMACHARVAAP-- 128
Query: 546 KTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLGIVD 707
K GLPE+ LG++PG GGTQRLP L + D+ L K++ +++ KLG++D
Sbjct: 129 KAQLGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSKSISSEEGHKLGLID 182
>At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP2)
identical to fatty acid multifunctional protein (AtMFP2)
GB:AF123254 [gi:4337027] (Arabidopsis thaliana) (fatty
acid beta-oxidation); contains Pfam profiles PF02737
(3-hydroxyacyl-CoA dehydrogenase, NAD binding domain),
PF00378 (enoyl-CoA hydratase/isomerase family protein),
PF00725 (3-hydroxyacyl-CoA dehydrogenase)
Length = 725
Score = 112 bits (269), Expect = 3e-25
Identities = 70/177 (39%), Positives = 103/177 (58%), Gaps = 4/177 (2%)
Frame = +3
Query: 189 NGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISM 368
+GV V+TL +P VNSL+ V+ + + E + + ++A ++I+G G F G DIS
Sbjct: 16 DGVAVITLINP--PVNSLSFDVLYNLKSNYEEALSRNDVKA-IVITGAKGRFSGGFDISG 72
Query: 369 IENCKTKEEVVSLSKRGHE----IFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAV 536
+ V K G+ I +E +RKP +AAI G LGGGLE A+AC RI+
Sbjct: 73 FGEMQKGN--VKEPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHARISA 130
Query: 537 KDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLGIVD 707
++ GLPE+ LG++PG GGTQRLP L + L++ LT K VKA++ LG++D
Sbjct: 131 PAAQ--LGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLID 185
>At4g16800.1 68417.m02537 enoyl-CoA hydratase, putative similar to
AU-binding protein/Enoyl-CoA hydratase [Homo sapiens]
GI:780241, [Mus musculus]GI:6840920; contains Pfam
profile PF00378 enoyl-CoA hydratase/isomerase family
protein
Length = 229
Score = 93.9 bits (223), Expect = 9e-20
Identities = 56/153 (36%), Positives = 82/153 (53%)
Frame = +3
Query: 252 VMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIF 431
+++ + N I ++ +I S PG F AGAD+ + EV + +F
Sbjct: 1 MLKSLQNAFESIHQDNSARVVMIRSLVPGVFCAGADLKE-RRTMSPSEVHTYVNSLRYMF 59
Query: 432 RRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQR 611
IE P IAAI+G+ LGGGLE ALAC RI +++ FGLPE L ++PG GGTQR
Sbjct: 60 SFIEALSIPTIAAIEGAALGGGLEMALACDLRICGENAV--FGLPETGLAIIPGAGGTQR 117
Query: 612 LPALTSIPTTLDLALTGKTVKADKAKKLGIVDL 710
L L + +L TG+ + A +A G+V++
Sbjct: 118 LSRLVGRSVSKELIFTGRKIDAIEAANKGLVNI 150
>At5g43280.1 68418.m05290 enoyl-CoA hydratase/isomerase family
protein similar to Delta 3,5-delta2,4-dienoyl-CoA
isomerase, mitochondrial (ECH1) from Rattus norvegicus
[SP|Q62651], from Homo sapiens [SP|Q13011]; contains
Pfam profile PF00378 enoyl-CoA hydratase/isomerase
family protein
Length = 278
Score = 83.8 bits (198), Expect = 1e-16
Identities = 54/183 (29%), Positives = 94/183 (51%), Gaps = 11/183 (6%)
Frame = +3
Query: 189 NGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISM 368
+ V+ + ++ P+ +N+L+ E ++ ++ N + + +I+SG F +G D++
Sbjct: 18 SSVFHLIINRPS-HLNALSLDFFIEFPKALSSLDQNPDV-SVIILSGAGKHFCSGIDLNS 75
Query: 369 IENCKTKEEVVSLSKRGHEIFRR-----------IEQSRKPYIAAIQGSCLGGGLETALA 515
+ + T+ + R E RR IEQ RKP IAAI G+C+GGG++ A
Sbjct: 76 LSSISTQSSSGNDRGRSSEQLRRKIKSMQAAITAIEQCRKPVIAAIHGACIGGGVDLITA 135
Query: 516 CKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKL 695
C R +D+ F + EV L ++ G QRLP++ ++LALT + +AK L
Sbjct: 136 CDIRYCSEDA--FFSIKEVDLAIVADLGTLQRLPSIVGYANAMELALTARRFSGSEAKDL 193
Query: 696 GIV 704
G+V
Sbjct: 194 GLV 196
>At4g16210.1 68417.m02460 enoyl-CoA hydratase/isomerase family
protein similar to 3-hydroxybutyryl-CoA dehydratase
(Crotonase) from Clostridium acetobutylicum [SP|P52046],
FadB1x (enoyl-CoA hydratase) from Pseudomonas putida
[GI:13310130]; contains Pfam profile PF00378 enoyl-CoA
hydratase/isomerase family protein
Length = 265
Score = 69.7 bits (163), Expect = 2e-12
Identities = 48/172 (27%), Positives = 87/172 (50%)
Frame = +3
Query: 192 GVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMI 371
G+ V+T++ P +NSL +M +++ +++++ ++ VI +G F +G D++
Sbjct: 18 GIAVITINRPK-SLNSLTRAMMVDLAKAFKDMDSDESVQV-VIFTGSGRSFCSGVDLTAA 75
Query: 372 ENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKT 551
E+ K +V + ++E+ RKP I AI G + G E ALAC +A + +K
Sbjct: 76 ESV-FKGDVKDPET---DPVVQMERLRKPIIGAINGFAITAGFELALACDILVASRGAK- 130
Query: 552 GFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLGIVD 707
F G+ P G +Q+L + +++LT + AD A KLG V+
Sbjct: 131 -FMDTHARFGIFPSWGLSQKLSRIIGANKAREVSLTSMPLTADVAGKLGFVN 181
>At3g24360.1 68416.m03058 enoyl-CoA hydratase/isomerase family
protein similar to CHY1 [gi:8572760]; contains Pfam
profile PF00388 enoyl-CoA hydratase/isomerase family
protein
Length = 418
Score = 62.5 bits (145), Expect = 3e-10
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Frame = +3
Query: 120 ISGVHSRKYAVPASQVHTKCK---LVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIE 290
+S H RK++V AS K NGV ++TLD P +N++N ++ + ++++E E
Sbjct: 28 LSVSHRRKFSVMASGSDEFVKGNVYPNGVALITLDRPKA-LNAMNLEMDLKYKSLLDEWE 86
Query: 291 TNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLSKR----GHEIFRRIEQSRKP 458
+ G++ V+ F AG DI + ++ SL ++ + + +I RKP
Sbjct: 87 YDPGVKCVVVEGSTSRAFCAGMDIKGVVAEILMDKNTSLVQKVFTAEYSLICKIAGYRKP 146
Query: 459 YIAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 599
YI+ + G +G GL + +YR+ + +T +PE +GL P G
Sbjct: 147 YISLMDGITMGFGLGLSGHGRYRVITE--RTVLAMPENGIGLFPDVG 191
>At4g13360.1 68417.m02089 enoyl-CoA hydratase/isomerase family
protein similar to CoA-thioester hydrolase CHY1
(beta-hydroxyisobutyryl-CoA hydrolase) [Arabidopsis
thaliana] GI:8572760; contains Pfam profile PF00378:
enoyl-CoA hydratase/isomerase family protein
Length = 381
Score = 51.6 bits (118), Expect = 5e-07
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 7/170 (4%)
Frame = +3
Query: 189 NGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADI-- 362
NGV ++TLD +N++N + + + ++E E++ ++ ++ F AG DI
Sbjct: 17 NGVALITLDRTKA-LNAMNLDMDIKYKSFLDEWESDPRVKCVIVEGSTSRAFCAGMDIKG 75
Query: 363 --SMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAV 536
+ I+ K V + + + I +KPYI+ + G +G GL + +YR+
Sbjct: 76 VAAEIQKDKNTPLVQKVFTAEYTLICAIAAYKKPYISLMDGITMGFGLGLSGHGRYRVIT 135
Query: 537 KDSKTGFGLPEVMLGLLPGGGGT---QRLPALTSIPTTLDLALTGKTVKA 677
+ +T +PE +GL P G + P S+ L LTGK + A
Sbjct: 136 E--RTVLAMPENGIGLFPDVGFSYIAAHSPGGGSVGAY--LGLTGKRISA 181
>At2g30650.1 68415.m03738 3-hydroxyisobutyryl-coenzyme A hydrolase,
putative / CoA-thioester hydrolase, putative strong
similarity to gi:8572760; contains Pfam profile PF00388
enoyl-CoA hydratase/isomerase family protein
Length = 422
Score = 51.2 bits (117), Expect = 7e-07
Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Frame = +3
Query: 189 NGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISM 368
+ V ++T + P ++N+L+ ++ + + E + ++ V++ G+ F AG DI
Sbjct: 57 SSVRILTFNRPK-QLNALSFHMVSRLLQLFLAYEEDPSVKL-VVLKGQGRAFSAGGDIPP 114
Query: 369 IENCKTKEEVVSLS---KRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVK 539
I + +++ + K G+ + + RKP ++ + G +GGG + ++RIA +
Sbjct: 115 IVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIATE 174
Query: 540 DSKTGFGLPEVMLGLLPGGGGTQRLPAL 623
+ T F +PE LGL P G + L L
Sbjct: 175 N--TVFAMPETALGLFPDVGASYFLSRL 200
>At2g30660.1 68415.m03739 3-hydroxyisobutyryl-coenzyme A hydrolase,
putative / CoA-thioester hydrolase, putative strong
similarity to gi:8572760; contains Pfam profile PF00388
enoyl-CoA hydratase/isomerase family protein
Length = 378
Score = 46.8 bits (106), Expect = 1e-05
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Frame = +3
Query: 156 ASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKP 335
ASQ + + V ++TL+ P ++N+L ++ + + E + ++ VI+ G+
Sbjct: 2 ASQSQVLVEEKSSVRILTLNRPK-QLNALCFNMISRLLQLFRAYEEDPSVKL-VILKGQG 59
Query: 336 GCFIAGADISMIENCKTKEEVVSLSKRGHEIFRR-------IEQSRKPYIAAIQGSCLGG 494
F AG D+ + + V + G + FR + KP ++ + G +G
Sbjct: 60 RAFCAGGDVPPV----VQNMVQGKWRLGADFFRDQYTLNYVMATYSKPQVSILNGIVMGA 115
Query: 495 GLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPAL 623
G ++ ++RIA ++ T F +PE LGL P G + L L
Sbjct: 116 GAGVSIHGRFRIATEN--TVFAMPETSLGLFPDVGASYFLSRL 156
>At1g60550.1 68414.m06816 naphthoate synthase, putative /
dihydroxynaphthoic acid synthetase, putative / DHNA
synthetase, putative contains similarity to MENB from
Escherichia coli [SP|P27290], Bacillus subtilis
[SP|P23966]; contains Pfam profile PF00378 enoyl-CoA
hydratase/isomerase family protein
Length = 337
Score = 45.6 bits (103), Expect = 3e-05
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 3/178 (1%)
Frame = +3
Query: 183 LVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGK-PGCFIAGAD 359
L G+ +T++ P + N+ Q ++E+ N+ +S + +I++GK F +G D
Sbjct: 83 LDEGIAKITINRPERR-NAFRPQTVKELMRAFNDARDDSSV-GVIILTGKGTKAFCSGGD 140
Query: 360 ISMI--ENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIA 533
++ + +V L+ ++ +I + KP IA + G +GGG + C IA
Sbjct: 141 QALRTQDGYADPNDVGRLNVLDLQV--QIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIA 198
Query: 534 VKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLGIVD 707
++ G P+V G G G+ + L ++ + A +A+K+G+++
Sbjct: 199 ADNAIFGQTGPKV--GSFDAGYGSSIMSRLVGPKKAREMWFMTRFYTASEAEKMGLIN 254
>At5g65940.1 68418.m08301 3-hydroxyisobutyryl-coenzyme A hydrolase /
CoA-thioester hydrolase (CHY1) identical to gi:8572760;
contains Pfam profile PF00388 enoyl-CoA
hydratase/isomerase family protein
Length = 378
Score = 45.2 bits (102), Expect = 4e-05
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Frame = +3
Query: 156 ASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKP 335
ASQ + + V ++TL+ P ++N+L+ ++ + + E + ++ VI+ G
Sbjct: 6 ASQSQVLVEEKSSVRILTLNRPK-QLNALSFHMISRLLQLFLAFEEDPSVKL-VILKGHG 63
Query: 336 GCFIAGADIS-MIENCKTKEEVVSLSKRGHEIFRRIEQSR--KPYIAAIQGSCLGGGLET 506
F AG D++ ++ + + + E + K ++ + G +GGG
Sbjct: 64 RAFCAGGDVAAVVRDINQGNWRLGANYFSSEYMLNYVMATYSKAQVSILNGIVMGGGAGV 123
Query: 507 ALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPAL 623
++ ++RIA ++ T F +PE LGL P G + L L
Sbjct: 124 SVHGRFRIATEN--TVFAMPETALGLFPDVGASYFLSRL 160
>At3g60510.1 68416.m06768 enoyl-CoA hydratase/isomerase family
protein similar to enoyl-CoA-hydratase, Avicennia
marina, EMBL:AF190450 [GI:6014701], CoA-thioester
hydrolase CHY1 from Arabidopsis thaliana [GI:8572760];
contains Pfam profile PF00378 enoyl-CoA
hydratase/isomerase family protein
Length = 401
Score = 44.8 bits (101), Expect = 6e-05
Identities = 32/134 (23%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
Frame = +3
Query: 231 VNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLS 410
+N+L T + + + E + I V++ G F AG DI + + +T+ ++
Sbjct: 58 LNALTTHMGYRLQKLYKNWEEDPNI-GFVMMKGSGRAFCAGGDIVSLYHLRTRGSPDAIR 116
Query: 411 KRGHEIFRRIE---QSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLG 581
+ ++ I KP++A + G +GGG ++ +R+A +T F PE ++G
Sbjct: 117 EFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVAT--DRTIFATPETIIG 174
Query: 582 LLPGGGGTQRLPAL 623
P G + L L
Sbjct: 175 FHPDAGASFNLSHL 188
>At1g65520.1 68414.m07434 enoyl-CoA hydratase/isomerase family
protein low similarity to enoyl-CoA hydratase
[Escherichia coli] GI:2764828, carnitine racemase
SP|P31551 [Escherichia coli]; contains Pfam profile
PF00378 enoyl-CoA hydratase/isomerase family protein
Length = 240
Score = 39.9 bits (89), Expect = 0.002
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 3/159 (1%)
Frame = +3
Query: 240 LNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIA-GADISMIENCKTKEEVVSLSKR 416
LN +++ + + +N+I ++ +V+I+ G F + G D+++ E+ + V+ R
Sbjct: 23 LNPTLLDSLRSTINQIRSDPSFSQSVLITTSDGKFFSNGYDLALAESNPSLSVVMDAKLR 82
Query: 417 GHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKTGF-GLPEVMLGLLPG 593
+ + P IAA+ G G A++ Y + +D GF + E+ + L+
Sbjct: 83 S--LVADLISLPMPTIAAVTGHASAAGCILAMSHDYVLMRRDR--GFLYMSELDIELIVP 138
Query: 594 GGGTQRLPALTSIPTTL-DLALTGKTVKADKAKKLGIVD 707
+ P D+ LT V AD K+GIVD
Sbjct: 139 AWFMAVIRGKIGSPAARRDVMLTAAKVTADVGVKMGIVD 177
>At4g14440.1 68417.m02227 enoyl-CoA hydratase/isomerase family
protein low similarity to PhaB [Pseudomonas putida]
GI:3253198, SP|P31551 Carnitine racemase {Escherichia
coli}; contains Pfam profile PF00378 enoyl-CoA
hydratase/isomerase family protein
Length = 238
Score = 37.1 bits (82), Expect = 0.011
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 3/151 (1%)
Frame = +3
Query: 264 VSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCK--TKEEVVSLSKRGHEIFRR 437
V +++ + ++ S + +I +G F G D++ ++ + + + K +
Sbjct: 31 VLSLLEQAKSQSTKGSVLITTGHGKFFSNGFDLAWAQSAGHGAIKRMHQMVKSFKPVLAA 90
Query: 438 IEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGL-LPGGGGTQRL 614
+ P IAA+ G GL AL+ Y KD + + EV +GL +P +
Sbjct: 91 LLDLPMPTIAALNGHAAASGLMFALSHDYVFMRKDRGVLY-MSEVDIGLPVPDYFSALVV 149
Query: 615 PALTSIPTTLDLALTGKTVKADKAKKLGIVD 707
+ S +L L+GK +K ++A LGIVD
Sbjct: 150 AKVGSGIARRELLLSGKKLKGEEAVALGIVD 180
>At3g19320.1 68416.m02450 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560;
Length = 493
Score = 36.3 bits (80), Expect = 0.020
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -2
Query: 601 PPPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPPRQLP 476
PPPP ++ SP+P E + Y H S PPPR LP
Sbjct: 69 PPPPPPPQSLPPPSPSPEPEHYPPPPYHHYITPSPPPPRPLP 110
>At4g14430.1 68417.m02226 enoyl-CoA hydratase/isomerase family
protein low siimilarity to 2-cyclohexenylcarbonyl CoA
isomerase [Streptomyces collinus] GI:8133118, enoyl-CoA
isomerase [Escherichia coli] GI:2764829; contains Pfam
profile PF00378 enoyl-CoA hydratase/isomerase family
protein
Length = 240
Score = 35.9 bits (79), Expect = 0.027
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 5/153 (3%)
Frame = +3
Query: 264 VSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIE 443
+ +++ + ++ S + +I + F G D++ + +K + + E F+ +
Sbjct: 31 ILSLLEQAKSQSTRGSILITTANGKFFSNGFDLAWAQTAGSKTGAANRLHQMVESFKPVV 90
Query: 444 QSR----KPYIAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGL-LPGGGGTQ 608
+ P IAA+ G GL AL+ Y KD + + EV +GL +P
Sbjct: 91 AALLDLPMPTIAALNGHAAAAGLILALSHDYVFMRKDRGVLY-MSEVDIGLSMPDYFSAL 149
Query: 609 RLPALTSIPTTLDLALTGKTVKADKAKKLGIVD 707
+ + +L L+GK ++ ++A LGIVD
Sbjct: 150 VRAKIGTSAARRELLLSGKKIRGEEAVGLGIVD 182
>At2g41750.1 68415.m05161 DTW domain-containing protein contains
Pfam domain, PF03942: DTW domain
Length = 253
Score = 32.3 bits (70), Expect = 0.33
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -2
Query: 619 AGNLCVPPPPG--KSPNMTSGSPNPVLESFTAMRYLHARAVSNPPPRQL 479
AG +P PP P+ S SP + F ++ L+ R +SNPPP +L
Sbjct: 82 AGGTALPAPPTIYLFPSSPS-SPAVTISEFKSLNLLNHREISNPPPLRL 129
>At4g36420.1 68417.m05174 ribosomal protein L12 family protein
Length = 179
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +3
Query: 48 NLKVMAN--SKILSALKILRSRKELFISGVHSRKYAVPASQVHTKCKLVNGVYVVTL 212
NL+++++ S++L + + S +LF + SR Y+ PA+Q K+VN + +TL
Sbjct: 3 NLRIISSHFSRVLKSTETRSSSVQLFT--IQSRSYSSPATQSENVSKIVNELSNLTL 57
>At2g05250.1 68415.m00553 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 706
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 452 ETVYCRNTRQLSRRWIRDCSCM*ISH 529
+TVY R+TR+ S++WI C + SH
Sbjct: 643 KTVYHRSTREDSKKWIPRCEMLRFSH 668
>At2g05230.1 68415.m00551 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 706
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 452 ETVYCRNTRQLSRRWIRDCSCM*ISH 529
+TVY R+TR+ S++WI C + SH
Sbjct: 643 KTVYHRSTREDSKKWIPRCEMLRFSH 668
>At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam
profile: PF00168 C2 domain
Length = 815
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 564 PEVMLGLLPGGGGTQRLPALTSIP 635
PEV +G+ GGGG Q LPA T +P
Sbjct: 229 PEVRIGVAFGGGGGQSLPA-TELP 251
>At4g33420.1 68417.m04749 peroxidase, putative identical to class
III peroxidase ATP32 [Arabidopsis thaliana]
gi|17530547|gb|AAL40837; identical to cDNA class III
peroxidase ATP32 GI:17530546
Length = 325
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +3
Query: 267 SNIVNEIETNSGIEAAVIISGKPGCFIAGADISMI-----ENCKTKEEVVSLSKRGHEI 428
+++ N ++ + + A +I CFI G D S++ +N K+ +LS RG+EI
Sbjct: 55 NSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDSPANLSLRGYEI 113
>At1g10050.1 68414.m01133 glycosyl hydrolase family 10 protein /
carbohydrate-binding domain-containing protein similar
to GB:AAD27896 to endoxylanases gi|1255238
(Thermoanaerobacterium thermosulfurigenes), gi|1813595
(Hordeum vulgare) and others ; contains Pfam profiles
PF00331: Glycosyl hydrolase family 10, PF02018:
Carbohydrate binding domain
Length = 1063
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 366 MIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLE 503
MIE C E ++ RGH IF +E + +P++ + GS L +E
Sbjct: 777 MIEFC----ERYNIKTRGHCIFWEVESAIQPWVQQLTGSKLEAAVE 818
>At5g39760.1 68418.m04816 zinc finger homeobox protein-related /
ZF-HD homeobox protein-related predicted proteins,
Arabidopsis thaliana
Length = 334
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 601 PPPPGKSPNMTSGSPNPVLESF 536
PPPP +SPN S SP P+ S+
Sbjct: 140 PPPPPRSPN--SASPPPISSSY 159
>At2g27810.2 68415.m03372 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 660
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 664 LPVRARSKVVGMEVRAGNLCVPPPPGKSPNMTSG 563
LPVRA+ + ++ AG + PPP S +T+G
Sbjct: 55 LPVRAKQQETQPDLEAGQTRLRPPPPVSAAVTNG 88
>At2g27810.1 68415.m03371 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 709
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 664 LPVRARSKVVGMEVRAGNLCVPPPPGKSPNMTSG 563
LPVRA+ + ++ AG + PPP S +T+G
Sbjct: 55 LPVRAKQQETQPDLEAGQTRLRPPPPVSAAVTNG 88
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 601 PPPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPPRQLP 476
PPPP + ++ +G P P ++ L + PPPR P
Sbjct: 61 PPPPAVNMSVETGIPPPPPPVTDMIKPLSSPPPPQPPPRSQP 102
>At4g08113.1 68417.m01331 myosin heavy chain-related similar to
Myosin heavy chain, skeletal muscle, extraocular
(MyHC-eo) (SP:Q9UKX3) {Homo sapiens}
Length = 764
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 282 EIETNS-GIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSR 452
+++TN+ + IS +PG + GA + +T+ E+++L +RG + ++R
Sbjct: 173 QVKTNARSDQGTYYISARPGSLVLGARTKEVTLSETELELLTLLQRGQTNWSTFSRNR 230
>At3g31990.1 68416.m04051 hypothetical protein similar to putative
replication protein A1 GB:AAD32756 from [Arabidopsis
thaliana]
Length = 450
Score = 27.9 bits (59), Expect = 7.0
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +3
Query: 156 ASQVHTKCKLVNGVYVVTLDSPNVKVNSLNT-QVMEEVSNIVNEIETNSGIEAAVIISGK 332
A QV T C+ NG ++ L V+ L T + + +SN N + + I+ K
Sbjct: 122 AEQVFTACETANGEMIICL----VRFAKLKTYKDVRSISNAFNTSQILINTDIPEILEFK 177
Query: 333 PGCFIAGADISMIENCKTKEEVVSL 407
G +++IE+ K K EV L
Sbjct: 178 DALPKDGLALTLIES-KPKSEVAEL 201
>At1g59890.1 68414.m06747 paired amphipathic helix repeat-containing
protein similar to transcription co-repressor Sin3
[Xenopus laevis] GI:4960210; contains Pfam profile
PF02671: Paired amphipathic helix repeat
Length = 1159
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 381 KTKEEV-VSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKD 542
+ +EEV V RG + R E + +P + I G GGL T A Y AVKD
Sbjct: 3 RVREEVYVEPQMRGPTVSSRGETNGRP--STISGGGTTGGLTTVDALTYLKAVKD 55
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -2
Query: 661 PVRARSKVVGMEVRAGNLCVPPPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPPRQ 482
PV+A + V + VP P +S S +P P+LE A +++ V +P P
Sbjct: 718 PVQAPTPVQAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAPT-PNSKPVQSPTPSS 776
Query: 481 LP 476
P
Sbjct: 777 EP 778
>At1g25520.1 68414.m03169 expressed protein contains Pfam profile
PF01169: Uncharacterized protein family UPF0016
Length = 230
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +3
Query: 552 GFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKK 692
GFGL + G GGGG++ L A DL GK+ K D +K+
Sbjct: 81 GFGLWSLWDGFKEGGGGSEEL-AEVEAELDADLKANGKSPK-DSSKR 125
>At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to chromatin
remodeling factor CHD3 (PICKLE) [Arabidopsis thaliana]
GI:6478518; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00628: PHD-finger, PF00385: 'chromo'
(CHRromatin Organization MOdifier)
Length = 2228
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -2
Query: 601 PPPPGKSPNMTSGSPNPVL--ESFTAMRYLHARAVSNPPPRQLPCIAA 464
P PP TSGS P L + + L + A+ PPP + IAA
Sbjct: 2072 PLPPPSLAGETSGSSQPKLPPHNLNSTEPLSSEAIIIPPPEEDSVIAA 2119
>At4g32640.1 68417.m04646 sec23/sec24 transport protein-related
Length = 1069
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 619 AGNLCVPPPPGKSPNMTSGSPNPV 548
+G++ PPPG P M GSP PV
Sbjct: 155 SGSVAAGPPPGSRP-MAFGSPPPV 177
>At4g20300.2 68417.m02965 expressed protein
Length = 352
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = -2
Query: 622 RAGNLCVPPPPGKSPNMTSGSPNP----VL--ESFTAMRYLHARAVSNPPPR 485
R+ N +PPPP P + S NP V+ ESF R L R+ + P R
Sbjct: 143 RSMNPSMPPPPPAPPIFSGRSTNPRNGFVIGKESFFPSRNLEDRSANGSPSR 194
>At4g20300.1 68417.m02964 expressed protein
Length = 339
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = -2
Query: 622 RAGNLCVPPPPGKSPNMTSGSPNP----VL--ESFTAMRYLHARAVSNPPPR 485
R+ N +PPPP P + S NP V+ ESF R L R+ + P R
Sbjct: 143 RSMNPSMPPPPPAPPIFSGRSTNPRNGFVIGKESFFPSRNLEDRSANGSPSR 194
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -2
Query: 601 PPPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPP 488
PPPP SP SP P + S Y V +PPP
Sbjct: 649 PPPPVHSPPPPVFSPPPPMHSPPPPVYSPPPPVHSPPP 686
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,757,067
Number of Sequences: 28952
Number of extensions: 332996
Number of successful extensions: 1356
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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