Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30186
(693 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 142 3e-34
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 53 3e-07
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 53 3e-07
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 52 4e-07
SB_269| Best HMM Match : ubiquitin (HMM E-Value=1.2e-09) 38 0.010
SB_10217| Best HMM Match : ubiquitin (HMM E-Value=1.6e-06) 37 0.018
SB_41240| Best HMM Match : UCH (HMM E-Value=9.2e-25) 34 0.13
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 31 0.89
SB_54020| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_7999| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_19000| Best HMM Match : Ery_res_leader2 (HMM E-Value=0.69) 29 3.6
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 29 4.7
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 29 4.7
SB_37962| Best HMM Match : Tcp10_C (HMM E-Value=5.9e-36) 28 6.2
SB_26428| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 142 bits (343), Expect = 3e-34
Identities = 90/208 (43%), Positives = 118/208 (56%), Gaps = 27/208 (12%)
Frame = +3
Query: 75 NKKSVKMLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKD-FVADHQRLIYAGKILL 251
N KSV M++T KTLQQQTF++EI +ETV LK KIE +KGKD + + +LIYAGKIL
Sbjct: 61 NIKSVNMIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILN 120
Query: 252 DDNKINSYNIDEKKFIVIMVTKPKVSES----QPTSTSIPEAG------ESASTDSGDXX 401
DDN + YNIDEK F+VIMV KPK + + P +T+IP+A +++ST D
Sbjct: 121 DDNPLKEYNIDEKSFVVIMVAKPKPAPAAVAPAPVTTTIPQAATASPSTQASSTAQEDSK 180
Query: 402 XXXXXXXXXXXXXXXXXXRVT-------ETPNT---------TSDAELEATIQSIMDMGY 533
T TP + + E E + IM+MG+
Sbjct: 181 PEAKPDEAKSTSTETAASATTTASTPAASTPRSYIEEAESALATGTEYEGLVTEIMNMGF 240
Query: 534 DRPQVEQALRASFNNRERAVEYLITGIP 617
+R QV +AL+ASFNN +RAVEYL TGIP
Sbjct: 241 ERDQVVRALQASFNNPDRAVEYLTTGIP 268
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Frame = +3
Query: 93 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 272
M + +KTL +T +E++P +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 273 YNIDEKKFIVIMV 311
YNI ++ + +++
Sbjct: 59 YNIQKESTLHLVL 71
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Frame = +3
Query: 93 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 272
M + +KTL +T +E++P +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 273 YNIDEKKFIVIMV 311
YNI ++ + +++
Sbjct: 59 YNIQKESTLHLVL 71
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Frame = +3
Query: 93 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 272
M + +KTL +T +E++P +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 134
Query: 273 YNIDEKKFIVIMV 311
YNI ++ + +++
Sbjct: 135 YNIQKESTLHLVL 147
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Frame = +3
Query: 93 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 272
M + +KTL +T +E++P +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 210
Query: 273 YNIDEKKFIVIMV 311
YNI ++ + +++
Sbjct: 211 YNIQKESTLHLVL 223
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Frame = +3
Query: 93 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 272
M + +KTL +T +E++P +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 286
Query: 273 YNIDEKKFIVIMV 311
YNI ++ + +++
Sbjct: 287 YNIQKESTLHLVL 299
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Frame = +3
Query: 93 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 272
M + +KTL +T +E++P +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 362
Query: 273 YNIDEKKFIVIMV 311
YNI ++ + +++
Sbjct: 363 YNIQKESTLHLVL 375
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Frame = +3
Query: 93 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 272
M + +KTL +T +E++P +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 438
Query: 273 YNIDEKKFIVIMV 311
YNI ++ + +++
Sbjct: 439 YNIQKESTLHLVL 451
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Frame = +3
Query: 93 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 272
M + +KTL +T +E++P +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 514
Query: 273 YNIDEKKFIVIMV 311
YNI ++ + +++
Sbjct: 515 YNIQKESTLHLVL 527
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Frame = +3
Query: 93 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 272
M + +KTL +T +E++P +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 273 YNIDEKKFIVIMV 311
YNI ++ + +++
Sbjct: 59 YNIQKESTLHLVL 71
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Frame = +3
Query: 93 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 272
M + +KTL +T +E++P +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 134
Query: 273 YNIDEKKFIVIMV 311
YNI ++ + +++
Sbjct: 135 YNIQKESTLHLVL 147
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Frame = +3
Query: 93 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 272
M + +KTL +T +E++P +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 210
Query: 273 YNIDEKKFIVIMV 311
YNI ++ + +++
Sbjct: 211 YNIQKESTLHLVL 223
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Frame = +3
Query: 93 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 272
M + +KTL +T +E++P +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 286
Query: 273 YNIDEKKFIVIMV 311
YNI ++ + +++
Sbjct: 287 YNIQKESTLHLVL 299
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Frame = +3
Query: 93 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 272
M + +KTL +T +E++P +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 362
Query: 273 YNIDEKKFIVIMV 311
YNI ++ + +++
Sbjct: 363 YNIQKESTLHLVL 375
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Frame = +3
Query: 93 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 272
M + +KTL +T +E++P +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 273 YNIDEKKFIVIMV 311
YNI ++ + +++
Sbjct: 59 YNIQKESTLHLVL 71
Score = 35.5 bits (78), Expect = 0.041
Identities = 17/55 (30%), Positives = 34/55 (61%)
Frame = +3
Query: 123 QTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINSYNIDE 287
+TF ++++ +TV+++K KI+ +G QRL+Y + L+D+ + YNI +
Sbjct: 86 KTFTLDVEASDTVESVKEKIQNREG--IPPKVQRLLYEEEELVDNRSLADYNIKQ 138
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/65 (38%), Positives = 42/65 (64%)
Frame = +3
Query: 93 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 272
M + +KTL +T +E++P +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 79 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 136
Query: 273 YNIDE 287
YNI +
Sbjct: 137 YNIQK 141
>SB_269| Best HMM Match : ubiquitin (HMM E-Value=1.2e-09)
Length = 414
Score = 37.5 bits (83), Expect = 0.010
Identities = 24/74 (32%), Positives = 36/74 (48%)
Frame = +3
Query: 153 ETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINSYNIDEKKFIVIMVTKPKVSE 332
ET L +K V + D + QRL+Y GK L DD ++ Y I + + + + K
Sbjct: 122 ETEPILAVKTLVAQELDVQVERQRLVYKGKTLADDCSLDEYLIGDGSKLYLSIKK---LS 178
Query: 333 SQPTSTSIPEAGES 374
SQP S+ AG +
Sbjct: 179 SQPGSSQKNYAGSN 192
>SB_10217| Best HMM Match : ubiquitin (HMM E-Value=1.6e-06)
Length = 479
Score = 36.7 bits (81), Expect = 0.018
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +3
Query: 84 SVKMLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNK 263
SV ++V QI + TV+ LK + + QRLIY+G++LLD
Sbjct: 9 SVTLVVKTPNKMIDDVQISCALDWTVEKLKKHLSDVYPSKPASKQQRLIYSGQLLLDHQT 68
Query: 264 INSY---NIDEKKFIVIMVTKPKVSESQPTSTSIPEAGESASTDS 389
I + I+ V +V P S S PT+ + P + S ++ +
Sbjct: 69 IKEFLREPIEGMMHTVHLVCPPSPSHSTPTTPTPPLSQPSPASSA 113
>SB_41240| Best HMM Match : UCH (HMM E-Value=9.2e-25)
Length = 1088
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 498 EATIQSIMDMGYDRPQVEQALRASFNNRERAVEYLIT 608
E + I+ MG+ R Q +AL+A+ NN ERA +++ +
Sbjct: 896 EEAVSMIISMGFTRDQAIKALKATDNNLERAADWIFS 932
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 213 DHQRLIYAGKILLDDNKINSYNIDEKKFIVIMV 311
D QRLI+AGK L D ++ YNI ++ + +++
Sbjct: 5 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 37
>SB_54020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2431
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 471 PNTTSDAEL-EATIQSIMDMGYDRPQVEQALRASFNNRERAVEYLI 605
P+ E+ E +Q +MDMG+ R A+ + N+ E+A EY++
Sbjct: 1463 PSAPPQPEINEQHLQQLMDMGFTREHARDAI-LNTNSLEQATEYIL 1507
>SB_7999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 240 KILLDDNKINSYNIDEKKFIVIMVTKPKVSESQPTSTSIPEAGES 374
KI ++ + +YN +E VI++ VS P ST PEA +S
Sbjct: 20 KINQTESLVYTYNSEEHTADVILLPCSSVSHDNPQSTREPEANDS 64
>SB_19000| Best HMM Match : Ery_res_leader2 (HMM E-Value=0.69)
Length = 310
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -3
Query: 376 ALSPASGMEVDVGWLSETLGFVTIITMNFFSSML*EFILLSSRRIFPA 233
+L SGM V + W + G + T N S+ + +L+ + + FP+
Sbjct: 77 SLQSGSGMNVSIFWDTADFGLLNFTTTNTTVSVRGDVLLIGANQTFPS 124
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 210 ADHQRLIYAGKILLDDNKINSYN 278
A+ QRLI+ GK+L D+ K+ ++
Sbjct: 24 AERQRLIFKGKVLQDEKKLKEFD 46
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 210 ADHQRLIYAGKILLDDNKINSYN 278
A+ QRLI+ GK+L D+ K+ ++
Sbjct: 4 AERQRLIFKGKVLQDEKKLKEFD 26
>SB_37962| Best HMM Match : Tcp10_C (HMM E-Value=5.9e-36)
Length = 1290
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 315 KPKVSESQPTSTSIPEAGESA-STDSG 392
KPKVSE + STSI EA A T+SG
Sbjct: 764 KPKVSEEKKPSTSIEEAPAPAIETESG 790
>SB_26428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 231 YAGKILLDDNKINSYNIDEKKFIVIMVTKPKVSESQPTSTSIPEAGESASTD 386
Y K+L D K NI E V + PK+ +S P + GES S D
Sbjct: 855 YTSKLLTHDGK----NIQESLVAVKVAVAPKLKKSPPDKIIKLKEGESISLD 902
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,086,019
Number of Sequences: 59808
Number of extensions: 295892
Number of successful extensions: 756
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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