Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30186
         (693 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        24   1.2  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    24   1.6  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   3.6  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +3

Query: 483 SDAELEATIQSIMDMGYD 536
           S A+LEAT++ I D+G D
Sbjct: 311 SRADLEATLRKITDLGAD 328


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +3

Query: 231 YAGKILLDDNKINSYNIDEKKFIVIMVTKPKVSESQPTS 347
           Y GK   +D++  SY+ DE K+ +    K  + +   T+
Sbjct: 534 YLGKPTKEDSEWPSYSRDEPKYFIFDAEKTGLGKGPRTT 572


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 574 LNEARNACSTCGLSYPISIILWIVASNSA 488
           +N   + C TC       ++ W+  SNSA
Sbjct: 291 VNIVTSYCKTCISGRAFQVLTWLGYSNSA 319


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,526
Number of Sequences: 438
Number of extensions: 3126
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)