Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30175
         (607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.6  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.6  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   6.1  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 172 FSTFLADSLVIFKETRTVLVKINV 101
           ++T   DS +I+K T  +++ +NV
Sbjct: 338 YTTATYDSFMIYKTTNIIILGLNV 361


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 172 FSTFLADSLVIFKETRTVLVKINV 101
           ++T   DS +I+K T  +++ +NV
Sbjct: 63  YTTATYDSFMIYKTTNIIILGLNV 86


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
 Frame = -3

Query: 335 DFFKLNSPVFQIS---GYEDVINIDHRN 261
           DF+K+N PV+      G+ +V N   +N
Sbjct: 433 DFYKMNHPVYHKDPHYGFHNVTNTTLQN 460


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 117 KTVRVSLKMTRESAKN 164
           K     +K+TRE+AKN
Sbjct: 119 KLTAAEIKLTRETAKN 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,439
Number of Sequences: 336
Number of extensions: 2515
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)