Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30175
         (607 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC090999-19|AAK26156.1|  575|Caenorhabditis elegans Hypothetical...    38   0.006
Z47810-7|CAH10843.1|  538|Caenorhabditis elegans Hypothetical pr...    37   0.013
Z47810-6|CAB76718.1|  504|Caenorhabditis elegans Hypothetical pr...    37   0.013
AL031264-3|CAH04705.1|  538|Caenorhabditis elegans Hypothetical ...    37   0.013
AL031264-2|CAB76735.1|  504|Caenorhabditis elegans Hypothetical ...    37   0.013
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z81484-1|CAB03967.1|  314|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>AC090999-19|AAK26156.1|  575|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.16a protein.
          Length = 575

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = +3

Query: 210 GRYQIFQYVLICLPSVFVTMIDINYVFVAGDLEYR 314
           G+YQ  Q+ L+CLP++ V+M  +++ F + D  YR
Sbjct: 15  GKYQKIQFFLVCLPTIVVSMHALSWTFASVDTPYR 49


>Z47810-7|CAH10843.1|  538|Caenorhabditis elegans Hypothetical
           protein F45E10.2b protein.
          Length = 538

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 14/29 (48%), Positives = 22/29 (75%)
 Frame = +3

Query: 207 FGRYQIFQYVLICLPSVFVTMIDINYVFV 293
           FGR+Q  Q++LIC+P  FV+M  +++ FV
Sbjct: 78  FGRFQQIQFILICIPIAFVSMHVMSWTFV 106


>Z47810-6|CAB76718.1|  504|Caenorhabditis elegans Hypothetical
           protein F45E10.2a protein.
          Length = 504

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 14/29 (48%), Positives = 22/29 (75%)
 Frame = +3

Query: 207 FGRYQIFQYVLICLPSVFVTMIDINYVFV 293
           FGR+Q  Q++LIC+P  FV+M  +++ FV
Sbjct: 44  FGRFQQIQFILICIPIAFVSMHVMSWTFV 72


>AL031264-3|CAH04705.1|  538|Caenorhabditis elegans Hypothetical
           protein F45E10.2b protein.
          Length = 538

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 14/29 (48%), Positives = 22/29 (75%)
 Frame = +3

Query: 207 FGRYQIFQYVLICLPSVFVTMIDINYVFV 293
           FGR+Q  Q++LIC+P  FV+M  +++ FV
Sbjct: 78  FGRFQQIQFILICIPIAFVSMHVMSWTFV 106


>AL031264-2|CAB76735.1|  504|Caenorhabditis elegans Hypothetical
           protein F45E10.2a protein.
          Length = 504

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 14/29 (48%), Positives = 22/29 (75%)
 Frame = +3

Query: 207 FGRYQIFQYVLICLPSVFVTMIDINYVFV 293
           FGR+Q  Q++LIC+P  FV+M  +++ FV
Sbjct: 44  FGRFQQIQFILICIPIAFVSMHVMSWTFV 72


>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical
           protein H08M01.2b protein.
          Length = 1341

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 521 YSISKSKRVCTC*LKLIEKSLAYHEAFLFI 432
           Y       +C    K+++K LAYHEA LF+
Sbjct: 250 YLFGTLANLCLKSQKIVKKPLAYHEASLFV 279


>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical
           protein H08M01.2a protein.
          Length = 1320

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 521 YSISKSKRVCTC*LKLIEKSLAYHEAFLFI 432
           Y       +C    K+++K LAYHEA LF+
Sbjct: 250 YLFGTLANLCLKSQKIVKKPLAYHEASLFV 279


>Z81484-1|CAB03967.1|  314|Caenorhabditis elegans Hypothetical
           protein C47A10.2 protein.
          Length = 314

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 14/64 (21%), Positives = 32/64 (50%)
 Frame = +3

Query: 108 ILTKTVRVSLKMTRESAKNVEKGSCQVSDILEVFGRYQIFQYVLICLPSVFVTMIDINYV 287
           IL  ++ V ++ T  S + ++       D L       +   V+I +PS+ ++++D+N +
Sbjct: 211 ILNASMSVEMRKTSGSDRTMKLQK----DFLRALKLQVLIPIVIIIIPSIIISILDLNNI 266

Query: 288 FVAG 299
            + G
Sbjct: 267 HIQG 270


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,973,261
Number of Sequences: 27780
Number of extensions: 219039
Number of successful extensions: 396
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)