Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30172
(791 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A2EER3 Cluster: Putative uncharacterized protein; n=1; ... 35 2.7
UniRef50_Q8M9T2 Cluster: Putative membrane protein ycf1; n=1; Ch... 35 2.7
UniRef50_Q8IBY8 Cluster: Putative uncharacterized protein PF07_0... 34 4.7
UniRef50_UPI00006CD129 Cluster: TPR Domain containing protein; n... 33 6.2
UniRef50_Q03DM1 Cluster: ABC-type multidrug transport system, pe... 33 6.2
UniRef50_Q4YK16 Cluster: Reticulocyte binding protein, putative;... 33 6.2
UniRef50_A0GWH4 Cluster: Lipopolysaccharide biosynthesis; n=2; C... 33 8.2
>UniRef50_A2EER3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 663
Score = 34.7 bits (76), Expect = 2.7
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = -3
Query: 606 YVINTKNIQFVKKILLSYIFSLSID*NFCYKI*N-GLITLFDCTF--CTNSQLYLKEFL* 436
+ + + NI+FV +L +Y F +D CY N LF TF C++ LY+ EF+
Sbjct: 238 FAVASHNIEFVTYLLNNYTF--DVDLRICYNYNNLQSFLLFIDTFKLCSSGLLYISEFMG 295
Query: 435 SNFL 424
+N L
Sbjct: 296 NNIL 299
>UniRef50_Q8M9T2 Cluster: Putative membrane protein ycf1; n=1;
Chaetosphaeridium globosum|Rep: Putative membrane protein
ycf1 - Chaetosphaeridium globosum
Length = 1450
Score = 34.7 bits (76), Expect = 2.7
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Frame = +1
Query: 355 NVDILVEKIYNGYGLTDLNTDIEKKIALQKFLEVELGISAKSTIEERNQAI------LDF 516
N IL EK++N + + N IEK I +K ++ I K + N++I LDF
Sbjct: 877 NTIILFEKVFNKKRINEDNKTIEKSILNKKNEQL---ILKKDEVIPNNKSIAGKLSKLDF 933
Query: 517 ----VTKISVNTQTKDVAQKNLFDKLNILGVNYXXXXXXXXXXXXGSDELNKITNPLINT 684
+TK S+ TK + KN ++ L L N + LNK+ LI
Sbjct: 934 HNQNITKTSIKNATKQILIKNEYNSL--LKENKNLFTKNKIVFLKIKNILNKLNLKLIKV 991
Query: 685 -VDQTVKEKTYLVQAALNALTGFYA 756
++ T K KT L + N L FY+
Sbjct: 992 KINFTYKIKTVLKIISRNLLK-FYS 1015
>UniRef50_Q8IBY8 Cluster: Putative uncharacterized protein PF07_0042;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF07_0042 - Plasmodium falciparum
(isolate 3D7)
Length = 2910
Score = 33.9 bits (74), Expect = 4.7
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +1
Query: 310 VNVDIDIDQDSNEFLNVDILVEKIYNGYGLTDLNTDIEKKIALQKFLEVELGISAKSTIE 489
+N+ +D ++ NE LN+ + EK+ N + L + E+ + LE + G++ K T++
Sbjct: 2006 LNILLDQNKKINEELNIQVEQEKLINNEIIVQLKKENEENNKINSLLEEQNGLNKKVTLQ 2065
>UniRef50_UPI00006CD129 Cluster: TPR Domain containing protein; n=2;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 878
Score = 33.5 bits (73), Expect = 6.2
Identities = 15/40 (37%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = -3
Query: 462 QLYLKEFL*SNFLFYVSIQIS*TVAI-VDFFNKNIDIQEF 346
+L +K++ F+F S+QI T+ I +DFF++NI++ +F
Sbjct: 674 KLSIKQYFIDEFIFNSSVQIELTLLIQMDFFSQNINLSQF 713
>UniRef50_Q03DM1 Cluster: ABC-type multidrug transport system,
permease component; n=16; Bacilli|Rep: ABC-type
multidrug transport system, permease component -
Pediococcus pentosaceus (strain ATCC 25745 / 183-1w)
Length = 380
Score = 33.5 bits (73), Expect = 6.2
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Frame = +1
Query: 361 DILVEKIYNGYGLTDLNTDIEK----KIALQKFLEVELGISAKSTIEERNQAILDFVTKI 528
D ++EK N + +T NTD K K+A + + V K +E+ N+A+ + TK+
Sbjct: 89 DTIIEKDGNNFNITYANTDATKTATTKMAFKNAVTVNNIKQLKKHLEQSNRALNELQTKL 148
Query: 529 SVNTQTKDVAQKNL 570
++ T+ K V K++
Sbjct: 149 ALVTK-KSVKTKSM 161
>UniRef50_Q4YK16 Cluster: Reticulocyte binding protein, putative;
n=4; Plasmodium|Rep: Reticulocyte binding protein,
putative - Plasmodium berghei
Length = 391
Score = 33.5 bits (73), Expect = 6.2
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Frame = +1
Query: 445 FLEVELGISAKSTIEERNQAILDFVTKISVNTQTKDVAQKNLFDK-LNILGVNYXXXXXX 621
+L++ L IS IE+ N+ IL+F+ S++ + KD +LF K +N G N
Sbjct: 199 YLKIILNISDNYGIEKNNECILNFL--YSIDLKIKDFL--SLFTKNMNKSGNN------N 248
Query: 622 XXXXXXGSDELNKITNPLINTVDQTVKEKTYLVQAALN 735
++ KI N L VD K+K +++ A+N
Sbjct: 249 KNLNLSNNERYKKIENVLFKNVDLDEKDKYNIIKEAIN 286
>UniRef50_A0GWH4 Cluster: Lipopolysaccharide biosynthesis; n=2;
Chloroflexus|Rep: Lipopolysaccharide biosynthesis -
Chloroflexus aggregans DSM 9485
Length = 349
Score = 33.1 bits (72), Expect = 8.2
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = +1
Query: 406 LNTDIEKKIALQKFLEVELGISAKSTIEERNQAILDFVT 522
LNTD ++ +A QKF E +L ++ +++ QA++DF++
Sbjct: 159 LNTDFQESVAAQKFFE-DLIAPYQADVDQARQALIDFLS 196
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.312 0.133 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 467,694,939
Number of Sequences: 1657284
Number of extensions: 8192501
Number of successful extensions: 17111
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17032
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67496806780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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