Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30167
(527 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41266| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_30758| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_21417| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_13676| Best HMM Match : Spindle_assoc (HMM E-Value=7.2) 29 3.1
SB_47089| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_12162| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_40185| Best HMM Match : WD40 (HMM E-Value=0) 28 4.1
SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009) 28 4.1
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_6472| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_59217| Best HMM Match : TRAUB (HMM E-Value=0.25) 28 5.5
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_34584| Best HMM Match : Drf_FH1 (HMM E-Value=0.99) 28 5.5
SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007) 27 7.2
SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11) 27 7.2
SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_56155| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_11668| Best HMM Match : rve (HMM E-Value=6.2e-14) 27 9.6
SB_7399| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_48009| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
>SB_41266| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -2
Query: 439 STTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDP 302
STT E +SSTD EP + + + +RD R ++ D RDP
Sbjct: 195 STTETSETQSSTDTREPVNNRDTRETVNNRDTR--DTVNNRDTRDP 238
>SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1560
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 325 DSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDS 221
DS ++DP G+RR++ F E R V L+ D+
Sbjct: 101 DSPPIKDPPGVRRKIEEFTIEQRAVNKRRLDLLDT 135
>SB_30758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -2
Query: 466 RSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDL 311
RS D ST R S+ S+P+ EL+ R++ A ++ TD + L
Sbjct: 218 RSYQDLHRQSTPQHGRRGSTQQSSQPKFVNELFYKQRAKSAHSQRPTDKLHL 269
>SB_21417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -2
Query: 481 GLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKK 332
G S+ RS D A+ T PR ++ P P++ SRD +K
Sbjct: 300 GPSIARSHSDWAITRTKPRNRERAPESSQAPNDEAGKNPEVVSRDTMAQK 349
>SB_13676| Best HMM Match : Spindle_assoc (HMM E-Value=7.2)
Length = 259
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/108 (19%), Positives = 42/108 (38%)
Frame = -2
Query: 454 DAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSR 275
D+ P TP + +S R ++++K + L +P+GL+ + S
Sbjct: 26 DSTTPPPTPESPKVEGFRFSSSTKRNN---QNECGNSKLKGFMNRRQLSEPSGLKEQNSE 82
Query: 274 FECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPADGS 131
+ + ++ ++ +T + L D L + F HNP S
Sbjct: 83 KVGAAKPLLKPAIQTTNAEDATETTKLQDICDLFEKIVDFNHNPTSES 130
>SB_47089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 492
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/79 (27%), Positives = 36/79 (45%)
Frame = -2
Query: 463 SQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRR 284
++ AAL S P+ E STD S +H T+L L S D+ + D+ +P + +
Sbjct: 89 AESKAALLSNLPK-ESGPSTDSSISQHSTDLVSTLESGDSSTFAQDKPADVVEPQFIADK 147
Query: 283 VSRFECETRLVKSHCLEPP 227
T+ + +EPP
Sbjct: 148 -DNSSLLTQEKPAEFMEPP 165
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -2
Query: 439 STTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKK 329
S QER++ D + PRH EL PD+R D RV ++
Sbjct: 1453 SRVESQERQTMRD-TRPRHPDELRPDIR-HDIRVAQE 1487
>SB_12162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 54 NTAQYERNRSFGHLVHALGRAAGGAKLPSAGLCLNAS-KAEASLAESGKDMLTVEPRESG 230
+TA E++ +F + A G K+ +A + + K + + AE+G D+L
Sbjct: 184 DTANAEKSGNF-KMDTAKSEIGGNFKMDTAKSEIGGNFKMDTANAENGVDVLKTSASMVF 242
Query: 231 GSKQCDFTSRVSHSKRETRR 290
++Q TS++ ++++TRR
Sbjct: 243 NNEQFSATSQIKGTEKDTRR 262
>SB_40185| Best HMM Match : WD40 (HMM E-Value=0)
Length = 503
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 59 CSVREEPQFRTFGSCTRPSG 118
CS R P+ R F +CT PSG
Sbjct: 437 CSARTPPRRRPFTACTSPSG 456
>SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009)
Length = 888
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 474 VSTDRSTTLLYRAQHPARNGSRLQTIPSPD 385
+ T ST +R HP + S +QT+PS D
Sbjct: 168 IQTLPSTDSAHRTDHPTQTESTVQTLPSTD 197
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 4.1
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = -2
Query: 475 SLNRSQHDAALPSTTPRQERKSSTDYSEPRHR----TELYPDLRSRDARVKKKTDSIDLR 308
S +R + D+ PS PR+ RKS + S PR R + P +RS ++ +
Sbjct: 904 SPSRRRRDSPTPSPPPRRRRKSPSP-SPPRRRRRSPSNSPPPMRSSPLPPPQRKRASTPP 962
Query: 307 DPNGLRRRVSRFECETR 257
P RR+V+ E + R
Sbjct: 963 SPRRARRKVASPEEQDR 979
Score = 27.5 bits (58), Expect = 7.2
Identities = 34/103 (33%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Frame = +3
Query: 216 PRESGGSKQCDFTSRVSHS--KRETRRRSPFGS--RRSMLSVFFLTRASRLRRSGYNSVR 383
PR + ++ SR S S KRE RRRSP S RR R L RS VR
Sbjct: 1075 PRRTPEDRRRSRGSRRSPSPPKREPRRRSPSASPPRRE-------ARKRSLSRSPKREVR 1127
Query: 384 CRGSE*SVDDFRSWRGVVLG-RAASCCDLLRLSPAPGDSSEDE 509
RGS + + V +G A C R SP+ + +E
Sbjct: 1128 RRGSPSPSEGRKKPVDVEMGEEEAPPCKAARKSPSADEEPAEE 1170
>SB_6472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -2
Query: 442 PSTTPRQERKSSTDYSE-PRHRTELYPD 362
P+T PR +R+S T S+ RH + L PD
Sbjct: 8 PNTIPRSDRRSRTGISQRHRHTSSLTPD 35
>SB_59217| Best HMM Match : TRAUB (HMM E-Value=0.25)
Length = 626
Score = 27.9 bits (59), Expect = 5.5
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = -2
Query: 463 SQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDP 302
++ AAL S P+ E STD S +H T+L L S D+ + D+ +P
Sbjct: 434 AESKAALLSNLPK-ESGPSTDSSISQHSTDLVSTLESGDSSTFAQDKPADVVEP 486
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 210 VEPRESGGSK-QCDFTSRVSHSKRETRRRSPFGSRRSMLSVFFLTRASRLRRS 365
+E +S G + +CD TSR+S R F ++R++ F + S RS
Sbjct: 2037 IEDLDSFGQRDRCDGTSRISRQSRSRIETDVFPTKRNLSHSFKDVKTSESERS 2089
>SB_34584| Best HMM Match : Drf_FH1 (HMM E-Value=0.99)
Length = 217
Score = 27.9 bits (59), Expect = 5.5
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 97 FMHSAERPVVRSYHPRDYA*TPLRPKPA*PNPARICSLWSPESREALNNVTLLVAFRI-- 270
F H + P+ R +HP PL P+ + + ++ PESREA V V RI
Sbjct: 153 FHHESNEPLPRMFHPESN--EPL-PRMFTESNEHLPRMFHPESREAAVVVKPFVPVRIAH 209
Query: 271 QNA 279
QNA
Sbjct: 210 QNA 212
>SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007)
Length = 831
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -2
Query: 463 SQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRD 305
S HD S +P ++ + + SEPR + + +P R+ + + D+ D D
Sbjct: 475 SNHDRVNNSQSPSEQPLNQANGSEPRKQKKQFPMERTTNIQPNGSGDNHDRED 527
>SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11)
Length = 1692
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = -2
Query: 304 PNGLRRRVSRFECET----RLVKSHCLEPPDSRGSTVSISLPDSARLASALEAF 155
PN LR R S F L CL PP++ G I L D + LA A+
Sbjct: 1246 PNDLRGRWSDFFSNLFQLEHLELDRCLRPPNAEGKPWLIILSDGSDLAYGFAAY 1299
>SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -2
Query: 280 SRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPAD 137
+R+ E +L + H L PP +S SA +SA F P D
Sbjct: 35 ARYRAEAQLNRRHGLSPPTPPEGISPLSSSSSASSSSAASPFHTIPRD 82
>SB_56155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 58 LLSTRGTAVSDIWFMHSAERPVVRSYHPRDY 150
LLS G A++D+ +H A+ P +Y P Y
Sbjct: 151 LLSAFGMALADV--VHEAQEPCAHTYEPDSY 179
>SB_11668| Best HMM Match : rve (HMM E-Value=6.2e-14)
Length = 597
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 491 TWRRAESQQIAARRCSTEHNTPPGT 417
TWRR +QI R CS+E N P T
Sbjct: 502 TWRR-HVEQIRPRYCSSEDNEPNDT 525
>SB_7399| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -2
Query: 427 RQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRR 284
++ER+S+ + HR+ + D + R + V + + + GLRRR
Sbjct: 306 QKERRSNVGGDQKEHRSNVGGDQKERRSSVGESLATASTKHCRGLRRR 353
>SB_48009| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 27.1 bits (57), Expect = 9.6
Identities = 28/118 (23%), Positives = 50/118 (42%)
Frame = -2
Query: 499 DESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS 320
D PG N H+ A+ + P + +++ H L R D + KT +
Sbjct: 8 DPYPGPETKSNDRSHERAV--SIPGEPEQAAR-----AHHLGLRGRHRGNDQAPRGKTVA 60
Query: 319 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHN 146
++ R+ L R + RFE + V + + ++ GS SLP + +L A+ R +
Sbjct: 61 MEQRELE-LERMIDRFEKQQSEVMNAAQKFEEATGSLPDPSLPVANQLELAVRKIREH 117
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,038,662
Number of Sequences: 59808
Number of extensions: 362131
Number of successful extensions: 1263
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1197191618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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