Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30165
(660 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0689 - 30937621-30937665,30938143-30938208,30938303-309383... 149 2e-36
06_01_0981 + 7613381-7614086,7614203-7614282,7614883-7614960,761... 148 4e-36
04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403 98 6e-21
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 31 0.61
09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,504... 31 1.1
10_01_0112 - 1386762-1386953,1387228-1387309,1387399-1387509,138... 30 1.4
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954... 29 4.3
09_06_0032 + 20353789-20353963,20354240-20354340,20354426-203545... 28 5.7
03_05_0441 + 24350026-24350081,24350186-24351011,24351088-243511... 28 5.7
12_02_0193 + 15242068-15242265,15242356-15244589,15244675-152449... 28 7.6
11_06_0549 + 24868344-24868930,24869740-24869957,24870018-248701... 28 7.6
11_03_0003 - 8865721-8865802,8866707-8866747 28 7.6
10_08_0936 - 21679002-21679800,21679893-21680116,21681174-216813... 28 7.6
06_03_0968 - 26402154-26403834,26404322-26404383,26404473-264046... 28 7.6
06_01_1169 + 9996068-9996265,9996356-9998589,9998675-9998926,999... 28 7.6
06_01_1155 + 9777611-9777808,9777899-9780132,9780218-9780469,978... 28 7.6
06_01_0791 - 5910380-5911161,5911737-5912158,5912181-5912194 28 7.6
05_03_0258 - 11153709-11156090 28 7.6
02_02_0185 - 7590355-7590669 28 7.6
>02_05_0689 -
30937621-30937665,30938143-30938208,30938303-30938356,
30938489-30938560,30938648-30938743,30939883-30939960,
30940485-30940564,30940662-30941343
Length = 390
Score = 149 bits (361), Expect = 2e-36
Identities = 78/158 (49%), Positives = 103/158 (65%), Gaps = 3/158 (1%)
Frame = +2
Query: 194 KVTAPVVATNAKYSTKKEATFEIKPYKLHKLDQGPATSATLTSEDALKLYEQLTILRRIE 373
+ TA + A + ST P+ H +D P+ T T + L + ++++RR+E
Sbjct: 16 QATALIAARSISDSTAPLTIETSVPFTSHIVDP-PSRDVTTTPAELLTFFRDMSVMRRME 74
Query: 374 TASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRDADSVITAYRCHGWTYLM-GVSVLGV 550
A+ +LYK K+IRGFCHLY GQEAVAVGM AA+ +DS+ITAYR H TYL G ++
Sbjct: 75 IAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRSDSIITAYRDH-CTYLARGGDLVSA 133
Query: 551 LSELTGRRTGCSRGKGGSMHLYGR--NFYGGNGIVGAQ 658
+EL GR+ GCSRGKGGSMH Y + NFYGG+GIVGAQ
Sbjct: 134 FAELMGRQAGCSRGKGGSMHFYKKDANFYGGHGIVGAQ 171
>06_01_0981 +
7613381-7614086,7614203-7614282,7614883-7614960,
7615166-7615261,7615370-7615441,7615676-7615729,
7615819-7615884,7616291-7616335
Length = 398
Score = 148 bits (358), Expect = 4e-36
Identities = 74/133 (55%), Positives = 91/133 (68%), Gaps = 2/133 (1%)
Frame = +2
Query: 266 PYKLHKLDQGPATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEA 445
PYK H +D P AT T+ + + ++ +RR E A+ +LYK K+IRGFCHLY GQEA
Sbjct: 48 PYKSHIVDPPPREVAT-TARELATFFRDMSAMRRAEIAADSLYKAKLIRGFCHLYDGQEA 106
Query: 446 VAVGMRAAMRDADSVITAYRCHGWTYLMGVSVLGVLSELTGRRTGCSRGKGGSMHLYGR- 622
VAVGM AA AD++ITAYR H G + + +EL GRR GCSRGKGGSMHLY +
Sbjct: 107 VAVGMEAATTRADAIITAYRDHCAYLARGGDLAALFAELMGRRGGCSRGKGGSMHLYKKD 166
Query: 623 -NFYGGNGIVGAQ 658
NFYGG+GIVGAQ
Sbjct: 167 ANFYGGHGIVGAQ 179
>04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403
Length = 425
Score = 97.9 bits (233), Expect = 6e-21
Identities = 49/127 (38%), Positives = 70/127 (55%), Gaps = 2/127 (1%)
Frame = +2
Query: 278 HKLDQGPATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAVAVG 457
+K A + +T E+AL+LYE + + R E +Y + GF HLY+GQEAV+ G
Sbjct: 61 NKAAPAAAAHSAVTREEALELYEDMVLGRIFEDMCAQMYYRGKMFGFVHLYNGQEAVSTG 120
Query: 458 MRAAMRDADSVITAYRCHGWTYLMGVSVLGVLSELTGRRTGCSRGKGGSMHLYG--RNFY 631
+ AD V++ YR H GV V++EL G+ TGC RG+GGSMH++ N
Sbjct: 121 FIKLLNQADCVVSTYRDHVHALSKGVPARSVMAELFGKATGCCRGQGGSMHMFSEPHNLL 180
Query: 632 GGNGIVG 652
GG +G
Sbjct: 181 GGFAFIG 187
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -1
Query: 648 TIPLPP*KLRP-YKCMEPPLPREQPVLRPVSSESTPST 538
TIP+PP P M PP P +QP P S TP T
Sbjct: 405 TIPMPPIIAAPAITVMPPPAPSQQPQPPPPPSHPTPIT 442
>09_02_0152 +
5040845-5041001,5042645-5042757,5043556-5043816,
5043954-5044058,5044726-5044791,5044882-5044999,
5045018-5045103,5045900-5046424,5046534-5047115,
5047203-5047385,5049326-5049392,5049685-5049791,
5049977-5050076,5050228-5050313,5050394-5050485,
5050591-5050705,5050792-5050983
Length = 984
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Frame = +2
Query: 152 IPSAAK-FLAGNTITKVTAPVVATNAKY-STKKEATFEIKPYKLHKLDQGP-----ATSA 310
+PSA F +G I + + + A + + ST +T E PY+ L GP A +
Sbjct: 342 LPSATSAFHSGGVIPNLRSSLAANPSGFLSTSTSSTVEETPYRTRPLSGGPLSKLQAPRS 401
Query: 311 TLTSEDALKLYEQLTILRRIETASGNLYKE 400
+ +D + ++ L ++ +SG+L+ +
Sbjct: 402 NFSLKDDMDVFSPLVDVQPFTPSSGSLWDD 431
>10_01_0112 -
1386762-1386953,1387228-1387309,1387399-1387509,
1387590-1387841,1387927-1388348,1388430-1390160,
1390251-1390448
Length = 995
Score = 30.3 bits (65), Expect = 1.4
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Frame = -1
Query: 636 PP*KLRPYKCMEPPLPREQPVLRPVSSESTPSTLTPMR*VHP*QRYAVITESASRIAALI 457
PP + P + PP P +QP L P S +P + P +V T + +AL+
Sbjct: 586 PPLRSPPRQPTPPPSPSQQPPL-PTPQPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALL 644
Query: 456 PTATASCPEYR*QKPRMIFSLYRFPDAVSILRNIVSCSYS--LRASSEV 316
+T E K + +FS +R + L N++S S L A EV
Sbjct: 645 -ISTYDPKEIDKDKEKFMFSAFRNSEKRKELANVLSDSQKSVLAAQDEV 692
>07_03_1090 +
23891294-23892222,23892317-23892516,23895241-23895482,
23895771-23896461,23896486-23896562
Length = 712
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 654 APTIPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTP 544
AP PP RP + PP P Q +LRP+ +ES P
Sbjct: 212 APPQTNPP---RPVRPPPPPPPPRQRLLRPLPAESPP 245
>09_06_0032 +
20353789-20353963,20354240-20354340,20354426-20354560,
20354633-20354714,20354829-20354896,20354984-20355073,
20355133-20355257,20355384-20355717,20355841-20355957,
20356058-20356485,20356564-20356813,20356944-20357194,
20357278-20357587
Length = 821
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 212 VATNAKYSTKKEATFEIKPYKLHKLDQGPATSATLTSEDALKLY 343
+ TN S + + F+ K H DQ + S + ++E+A+KLY
Sbjct: 486 IETNKLRSRRSQEFFQTPEKKTHTDDQKHSESMSNSAENAIKLY 529
>03_05_0441 +
24350026-24350081,24350186-24351011,24351088-24351189,
24351278-24351343,24351418-24351483,24351594-24351800,
24351925-24352086
Length = 494
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 589 PGAAGPAPRQLREHPQHTNA 530
PGAA APR+L P+ TNA
Sbjct: 125 PGAASEAPRELMPPPKSTNA 144
>12_02_0193 +
15242068-15242265,15242356-15244589,15244675-15244926,
15245007-15245117,15245207-15245288,15245563-15245754
Length = 1022
Score = 27.9 bits (59), Expect = 7.6
Identities = 28/84 (33%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Frame = -1
Query: 651 PTIPLPP*KLRPYKCMEPPLPREQPV-LRPVSSESTPSTLTPMR*VHP*QRYAVITESAS 475
P P PP P +PPLP QPV P S + TP Q I +SA
Sbjct: 592 PRQPTPP----PSPSQQPPLPTPQPVQASPTSPTKQHAPPTP----PSVQTSPPIPQSAL 643
Query: 474 RIAALIPTATASCPEYR*QKPRMI 403
IP T S P+ +PR I
Sbjct: 644 VEQVHIPDGTTSEPKSNTLEPRRI 667
>11_06_0549 +
24868344-24868930,24869740-24869957,24870018-24870175,
24870202-24870633,24870717-24871064
Length = 580
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 194 KVTAPVVATNAKYSTKKEATFEIKPYKLHKLDQGPATSATLTSEDALK 337
K P+ AKY + F + K HK+ + AT+A T+ L+
Sbjct: 236 KTEFPIHLDQAKYESILREVFPLATSKPHKVQEAAATAAAATTAATLE 283
>11_03_0003 - 8865721-8865802,8866707-8866747
Length = 40
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -1
Query: 645 IPLPP*KLRPYKCMEPPLPRE 583
+PLP K++P+ C PP+P+E
Sbjct: 19 VPLPM-KVKPFDCALPPVPKE 38
>10_08_0936 -
21679002-21679800,21679893-21680116,21681174-21681361,
21681505-21682597
Length = 767
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 604 GTSLAPGAAGPAPRQLREHPQHTNAHEISPSVTTIRGDHRVCIAHR 467
GT+ + AA P P LR + + A + S S T + R+ I HR
Sbjct: 278 GTAPSEYAAAPLPLPLRRRDERSEAGD-SSSTVTAAAEMRMVIRHR 322
>06_03_0968 -
26402154-26403834,26404322-26404383,26404473-26404682,
26404776-26404860,26405461-26405618,26405745-26405868,
26405955-26406123,26406202-26406287,26406379-26406467,
26406564-26406735,26407820-26408193
Length = 1069
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 75 NNYYCQNLSRYIKSQEKLHVFQ 10
N Y C S Y+K+Q++L V+Q
Sbjct: 385 NKYKCDGCSDYVKAQKRLTVYQ 406
>06_01_1169 +
9996068-9996265,9996356-9998589,9998675-9998926,
9999007-9999117,9999207-9999288,9999563-9999754
Length = 1022
Score = 27.9 bits (59), Expect = 7.6
Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = -1
Query: 651 PTIPLPP*KLRPYKCMEPPLPREQPV-LRPVS--SESTPSTLTPMR*VHP*QRYAVITES 481
P P PP P +PPLP QPV P S + P P++ P + A++ E
Sbjct: 592 PRQPTPP----PSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPPVQTSPPTPQSALVEE- 646
Query: 480 ASRIAALIPTATASCPEYR*QKPRMI 403
IP T S P+ +PR I
Sbjct: 647 -----VHIPDGTTSEPKSNTLEPRRI 667
>06_01_1155 +
9777611-9777808,9777899-9780132,9780218-9780469,
9780550-9780660,9780750-9780831,9781106-9781297
Length = 1022
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = -1
Query: 636 PP*KLRPYKCMEPPLPREQPVL---RPVSSESTPSTLTPMR*VHP*QRYAVITESASRIA 466
PP + P + PP P +QP L +PV + T T P + + T +S +
Sbjct: 586 PPLRSPPRQPTPPPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSPPTPQSSLVE 645
Query: 465 AL-IPTATASCPEYR*QKPRMI 403
+ IP T S P+ +PR I
Sbjct: 646 EVHIPDGTTSEPKSNTLEPRRI 667
>06_01_0791 - 5910380-5911161,5911737-5912158,5912181-5912194
Length = 405
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 565 RQLREHPQHTNAHEISPSVTTIRGDHRV 482
RQL +HP+ H + P + T+ G ++
Sbjct: 283 RQLNKHPELLYCHMVEPRMATVEGRRKI 310
>05_03_0258 - 11153709-11156090
Length = 793
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = -1
Query: 660 TCAPTIPLPP*KLRPYKCMEPP----LPREQPVLRPVSSESTPS 541
T AP P PP RP+ PP P Q ++ +SS+ PS
Sbjct: 53 TAAPPPPQPPATRRPHPTPTPPHSFLSPAAQSLVAAISSQPLPS 96
>02_02_0185 - 7590355-7590669
Length = 104
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 225 QNTARKKRRHSKSSPTNSINWIRALQHQP 311
+ A +RRH+ +S + W R L+H+P
Sbjct: 18 EGAADDQRRHAMASAAAEVPWRRVLRHRP 46
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,645,678
Number of Sequences: 37544
Number of extensions: 360842
Number of successful extensions: 1380
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1375
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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