Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30164
         (659 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.73 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.73 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.73 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.73 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   3.9  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   3.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   5.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   6.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.8  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 465 SDPTLTEDELVALIQEYEHAARRGVEKTEGW 557
           SD   ++DE   L +     + R V++T+GW
Sbjct: 12  SDDNFSDDESSPLTENIYGGSTRTVQETKGW 42


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 465 SDPTLTEDELVALIQEYEHAARRGVEKTEGW 557
           SD   ++DE   L +     + R V++T+GW
Sbjct: 12  SDDNFSDDESSPLTENIYGGSTRTVQETKGW 42


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 465 SDPTLTEDELVALIQEYEHAARRGVEKTEGW 557
           SD   ++DE   L +     + R V++T+GW
Sbjct: 12  SDDNFSDDESSPLTENIYGGSTRTVQETKGW 42


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 465 SDPTLTEDELVALIQEYEHAARRGVEKTEGW 557
           SD   ++DE   L +     + R V++T+GW
Sbjct: 12  SDDNFSDDESSPLTENIYGGSTRTVQETKGW 42


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 383 RER*SRKRVWTSWSSSHNRKRRYKKENQRSHID 481
           RER    +++  WSS  N  R  K++ ++   D
Sbjct: 534 RERQLHMQLYPDWSSRANATRGKKRKRKQDPAD 566


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 383 RER*SRKRVWTSWSSSHNRKRRYKKENQRSHID 481
           RER    +++  WSS  N  R  K++ ++   D
Sbjct: 426 RERQLHMQLYPDWSSRANATRGKKRKRKQDPAD 458


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 524 RKKGSREDRRLGHECACREQSGIKRCNL 607
           R  GS  DR    EC C+     K C+L
Sbjct: 116 RNNGSCVDRIADFECNCKNGWKGKTCSL 143


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +2

Query: 185 GHHVYKEHH 211
           GHH++ +HH
Sbjct: 327 GHHIHAQHH 335


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 221 PQSDDALCIRDVHLQVADFDVGP 153
           PQ+ D     DVH  V D DVGP
Sbjct: 651 PQNPD----NDVHSIVDDSDVGP 669


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 557 GHECACREQSGIKRCNLS 610
           GH+C C E    K C  S
Sbjct: 359 GHKCTCPEGFYGKNCEFS 376


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,834
Number of Sequences: 336
Number of extensions: 3412
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)