Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30164
(659 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.19
SPCC18.08 |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr 3|... 29 0.45
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 29 0.59
SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 29 0.59
SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog... 29 0.59
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 28 1.0
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 28 1.4
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 27 1.8
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 1.8
SPBC17D11.03c |||conserved fungal protein|Schizosaccharomyces po... 27 3.2
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 27 3.2
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 26 4.2
SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32 |Schi... 26 5.5
SPBC947.08c |||histone promoter control protein Hpc2 |Schizosacc... 26 5.5
SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces po... 26 5.5
SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces po... 25 7.3
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 25 7.3
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 25 7.3
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 25 7.3
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 25 7.3
SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyce... 25 9.7
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 9.7
SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces ... 25 9.7
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 30.7 bits (66), Expect = 0.19
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +1
Query: 28 SSAPQATSDTKS*KNSQRLTKEKSTSLQKMTQPASTSSRAWRGPTSKSATCKWTSRIQRA 207
SS+P +TS T S +S + + S M+ +S SS PTS S+T +S +
Sbjct: 297 SSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSS----SPTSSSSTISSSSSSPSS 352
Query: 208 SSD*GTTS 231
SS TTS
Sbjct: 353 SSFSSTTS 360
Score = 25.0 bits (52), Expect = 9.7
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 28 SSAPQATSDTKS*KN-SQRLTKEKSTSLQKMTQPASTSSR-AWRGPTSKSATCKWTSRIQ 201
SS TS +KS + S ++ STS +T +S+SSR A S S + +S
Sbjct: 353 SSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSS 412
Query: 202 RASS 213
++SS
Sbjct: 413 KSSS 416
>SPCC18.08 |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 531
Score = 29.5 bits (63), Expect = 0.45
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 477 LTEDELVALIQEYEHAARRGVEKTEGWGMNV 569
L +DE A ++ HA G+ T GWGM V
Sbjct: 476 LGDDETPAPDSDFVHALEYGLPPTAGWGMGV 506
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 29.1 bits (62), Expect = 0.59
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +3
Query: 276 YVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYPLLNENARVVNVSGPAGLLATIEN 443
Y+ +KNL I T+ + ++ L+Y L ++ + +SG G++ T+E+
Sbjct: 519 YIVKKNLELITSIHETIRIKSAVWVENNVLLYATL-DHLKYALMSGDTGVIKTLES 573
>SPCC1259.11c |gyp2||GTPase activating protein Gyp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 720
Score = 29.1 bits (62), Expect = 0.59
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -1
Query: 164 DVGPLQALEDVEAGCVIFCSEVD--FSFVSLCEFF 66
+VG QA+ V A +++C+E F F LCEF+
Sbjct: 297 EVGYCQAMNIVLAALLVYCTEEQAYFLFSQLCEFY 331
>SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 982
Score = 29.1 bits (62), Expect = 0.59
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 264 NITDYVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYPLL 380
NI D V+ ++ NFE+IRRTL N + + +P L
Sbjct: 656 NILDIVSLEDTPNFEEIRRTLENNHCARLYLKQARHPCL 694
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 28.3 bits (60), Expect = 1.0
Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 219 RHYIQDLDERI-DLLINITDYVAEKNLSNFEKIRR 320
R++ QDL R+ DLL+N T +V+E+NL E++ +
Sbjct: 979 RYWNQDLWHRLFDLLLNPTLHVSEENLPMTEELSK 1013
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 27.9 bits (59), Expect = 1.4
Identities = 31/108 (28%), Positives = 49/108 (45%)
Frame = +3
Query: 228 IQDLDERIDLLINITDYVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYPLLNENARVVNV 407
I +DE LI+ TD+V + L EK + GY++ +L+ LLN+ +++N
Sbjct: 1128 IPSVDESFISLIHSTDHVEQPLLIEIEK-NKGYKFKLTGYLS-SELLNNLLNDFDKILNF 1185
Query: 408 SGPAGLLATIENEDIRKRISDPTLTEDELVALIQEYEHAARRGVEKTE 551
+L IE++ + T+TE V E AR G K E
Sbjct: 1186 -----ILYNIESKIQTHASFNVTITEHNHV------ESKARTGFSKRE 1222
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 300 NFEKIRRTLSVNFYGYINFGK-LVYPLLNENARVVNVS 410
+ E + + + VNFYG I K + L+ +VNV+
Sbjct: 97 DIEDVSKVMDVNFYGVIRMNKAFQHQLIRAKGTIVNVN 134
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 28 SSAPQATSDTKS*KNSQRLTKEKSTSLQKMTQPASTSSRAWRGPTSKSATCKWTSRIQRA 207
SS P ++S + S S +K S+S + +S+ S + +SKS++ +S A
Sbjct: 151 SSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSA 210
Query: 208 S 210
S
Sbjct: 211 S 211
>SPBC17D11.03c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 213
Score = 26.6 bits (56), Expect = 3.2
Identities = 11/58 (18%), Positives = 29/58 (50%)
Frame = +3
Query: 87 KGKIYFTTEDDTAGFNILKSLERPDIEISYLQMDITYTKSIIRLRHYIQDLDERIDLL 260
+GKIYF +L+S++ ++++ + +D Y K ++ + L+ + ++
Sbjct: 103 RGKIYFEKTYGKVTQRVLRSMQSSSLDLANIALDYAYGK-VLSFNEVVSPLETSLMII 159
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 26.6 bits (56), Expect = 3.2
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 49 SDTKS*KNSQRLTKEKSTSLQKMTQPASTSSRAWRGP-TSKSATCKWTSRIQRASSD*GT 225
+DT+ +S+ ++ + +K ++ +ST+++ WRG TSK + R T
Sbjct: 73 ADTEKYNSSKSPVNKEGSVEKKSSEKSSTNNKPWRGDNTSKPSANSSAERTSSQHQKPET 132
Query: 226 TSRI 237
+S+I
Sbjct: 133 SSQI 136
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 26.2 bits (55), Expect = 4.2
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +3
Query: 264 NITDYVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYPLLNENARVV-------NVSGPAG 422
++ + KNLS + ++ + + I GKL P++++N R+V N S
Sbjct: 110 DLKEIFLNKNLSTLDGLQ---DASLHDNIQSGKLDNPVISQNRRIVLEKLANPNSSKEYE 166
Query: 423 LLATIEN-EDIRKRISDPTLTEDELVALIQE 512
+ T+EN + K TL +E + + E
Sbjct: 167 TIPTVENRHPLNKLSKTKTLAYEETINQLDE 197
>SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 749
Score = 25.8 bits (54), Expect = 5.5
Identities = 25/119 (21%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Frame = +3
Query: 57 QVLKKLTETHKGKIYFTTEDDTAGFNILKSLERPDIEISYLQMDITYTKSIIRLRHYIQD 236
++ K L + G ++ +NI S D + + ++++S+ R+ D
Sbjct: 149 EIQKGLLQIIDGLVFLHGSAKVIHYNIRPSSVVVDAKGDWKLCGFSFSQSVESARYEFND 208
Query: 237 LDERI-DLLINITDYVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYPLLNENARVVNVS 410
D I L D++A + +++ +I S F +FG L+Y + N+N ++N +
Sbjct: 209 YDFGIPSSLQQSMDFLAPEYITH--EIAGPESDVF----SFGCLIYSIFNKNQSIINAN 261
>SPBC947.08c |||histone promoter control protein Hpc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 338
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 43 ATSDTKS*KNSQRLTKEKSTSLQKMTQPASTSS 141
A DT + S++ K+K TSL T PA S
Sbjct: 125 AEGDTVKIERSKKTKKKKKTSLSNATHPAPAVS 157
>SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 381 NENARVVNVSGPAGLLATIENEDIRKRISDPTLTED 488
NE+ R VN S ++I+ ++R +SD T +E+
Sbjct: 309 NEDKRSVNGSERTETRSSIDQSEMRTNVSDSTKSEE 344
>SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 558
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 357 GKLVYPLLNENARVVNVSGPAGLLATIENEDIRKRIS 467
G+LVY LLNE + VSG +G + + + I +S
Sbjct: 494 GELVYNLLNEKDGMFFVSGSSGKMPSSVKDAIAGIVS 530
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 25.4 bits (53), Expect = 7.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 76 QRLTKEKSTSLQKMTQPASTSSRAWRGPTSKSAT 177
QR +E +S QK++ + WR P+ S T
Sbjct: 206 QRFEREDESSRQKLSAAMNEDIPPWRQPSKNSQT 239
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 25.4 bits (53), Expect = 7.3
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 87 KGKIYFTTEDDTAGFNILKSLERPDIEISYLQMDITYTKSIIRLRHYIQ--DLDERIDLL 260
KGKI E+ +ILK+ + T T ++ + DLDE D
Sbjct: 382 KGKISTDMEECKVSKSILKTTPSKKANARSVSFTQTTTDTLSESEKFASNVDLDENFDFN 441
Query: 261 INITDYVAEK 290
+N+T+ A++
Sbjct: 442 VNVTNEDAKQ 451
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +3
Query: 81 THKGKIYFTTEDDTAGFNILKSLERPDIEISYLQMDITYTKSIIRLRHYIQDL 239
TH K + DD + L+ + PDI+ D T ++S Y+QDL
Sbjct: 461 THLEKPVISKNDDLIRGDDLEPYDFPDIDSEDTDDDPTVSRSKTHSPVYVQDL 513
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -1
Query: 488 IFCQCGIADSLSYIFVFDCG*KTSWSRHVYDSSVLVQ*RVHKLPKV 351
+ C + S+S +F CG T+W + + S L + ++ K K+
Sbjct: 435 VLCSDVVNLSVSTVFNLLCGSDTTWIINFFKSEKLTEIKIGKWEKI 480
>SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 760
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 450 IRKRISDPTLTEDELVALIQEY 515
IR+R+ TED L+ IQEY
Sbjct: 713 IRERVLAKGFTEDHLINTIQEY 734
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.0 bits (52), Expect = 9.7
Identities = 25/76 (32%), Positives = 33/76 (43%)
Frame = +1
Query: 28 SSAPQATSDTKS*KNSQRLTKEKSTSLQKMTQPASTSSRAWRGPTSKSATCKWTSRIQRA 207
SSA ++ + + NS + S+SL T +TSS S SA TS +
Sbjct: 174 SSATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSA----TSSSLAS 229
Query: 208 SSD*GTTSRI*TKGSI 255
SS TTS T SI
Sbjct: 230 SSLNSTTSATATSSSI 245
>SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1150
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 628 PIPLCCRKVTAFNATLLTACTFMPQPSVFSTPLL 527
PIPLCC K+ + LT S+PLL
Sbjct: 384 PIPLCCAKILLYARRQLTRMARWNNLIDDSSPLL 417
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,775,815
Number of Sequences: 5004
Number of extensions: 59552
Number of successful extensions: 232
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 232
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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